BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg355985 Length=1503 Score E Sequences producing significant alignments: (Bits) Value AT5G40030.1 | Symbols: | Protein kinase superfamily protein | ... 2527 0.0 > AT5G40030.1 | Symbols: | Protein kinase superfamily protein | chr5:16026227-16028283 FORWARD LENGTH=1500 Length=1500 Score = 2527 bits (1368), Expect = 0.0 Identities = 1459/1503 (97%), Gaps = 5/1503 (0%) Strand=Plus/Plus Query 1 ATGAGTAACCAAACTCCAAATCTTGAATCTTCTTTACATGATTGTTCTTCTTCCAATTAC 60 |||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1 ATGAGTAAACAAACTCCAAATCTTGAA---TCTTTACAAGATTGTTCTTCTTCCAATTAC 57 Query 61 AACAATGCCAATGCTAGTCCAGTTTCTGGATCCGCAAGCTTCAAAACTAGCAGTAATGGC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 AACAATGCCAATGCTAGTCCAGTTTCTGGATCCGCAAGCTTCAAAACTAGCAGTAATGGC 117 Query 121 TCTGAAGACGTTAGGCTTAACAATAGTATCAGCTTAAGTTTCTGTAGCAGTAACAGTGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 TCTGAAGACGTTAGGCTTAACAATAGTATCAGCTTAAGTTTCTGTAGCAGTAACAGTGTA 177 Query 181 AGCAGTGAAGCTAATCTCGAAAAGTCTCAATCTTTCGATGCAAACGAGGCTAATTTCAAA 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 178 AGCAGTGAAGCTAATCTCGAAAAGACTCAATCTTTCGATGCAAACGAGGCTAATTTCAAA 237 Query 241 AGGGTCTTTGCTCCTTCGAAGCCACATAAAGGGAACGATCTTAGATGGGACGCGATTCAG 300 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 238 AGGGTCTTTGCTCCTTCGAAGCCGCATAAAGGAAACGATCTTAGATGGGACGCGATTCAG 297 Query 301 AGTGTTAAGTGTAGTAAAAACGAGGATCTGGGTTTAGGGCATTTTAGGTTGTTGAAGAAG 360 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 AATGTGAAGTGTAGTAAAAACGAGGATCTGGGTTTAGGGCATTTTAGGTTGTTGAAGAAA 357 Query 361 TTAGGATGTGGAGATATTGGGAGTGTGTATTTAGCTGAGCTTAGAGAGATGGGATGTTTC 420 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 358 TTGGGATGTGGAGATATTGGGAGTGTGTATTTAGCTGAGCTCAGAGAGATGGGATGTTTC 417 Query 421 TTTGCCATGAAAGTGATGGATAAAGGAATGTTGATTGGTAGGAAGAAACTGGTTAGAGCT 480 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 418 TTTGCTATGAAAGTGATGGATAAAGGAATGTTGATTGGTAGGAAGAAATTGGTTAGAGCT 477 Query 481 CAGACTGAGAGAGAGATTTTGGGTTTGTTGGATCACCCTTTCTTGCCTACGCTTTACTCT 540 ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct 478 CAGACTGAGAGAGAGATTTTGGGTTTGTTAGATCATCCTTTCTTGCCTACTCTTTACTCT 537 Query 541 CATTTCGAGACTGAGAAGTTTTCTTGTCTTTTGATGGAGTTTTGTAGCGGTGGAGATCTT 600 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 538 CATTTCGAGACTGAGAAGTTTTCTTGCCTTTTGATGGAGTTTTGTAGCGGTGGAGATCTT 597 Query 601 CATATTCTCCGGCAGAAACAGCCCGGAAAACATTTCTCCGAACTAGCCGCCAGGTTTTAT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 CATATTCTCCGGCAGAAACAGCCCGGAAAACATTTCTCCGAACTAGCCGCCAGGTTTTAT 657 Query 661 GCTTCTGAAGTACTTCTTGCGCTTGAGTATCTTCATATGATGGGTGTAGTGTACAGAGAT 720 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 658 GCTTCTGAAGTACTTCTTGCGCTAGAGTATCTTCATATGATGGGTGTAGTGTACAGAGAT 717 Query 721 TTGAAACCAGAGAATGTAATGGTGAGAGAAGATGGTCACATTATGCTTTCGGATTTCGAT 780 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 TTGAAGCCAGAGAATGTAATGGTGAGAGAAGATGGTCACATTATGCTTTCGGATTTCGAT 777 Query 781 CTTTCGTTGCAGAGTTTCGTGAGTCCTACATTGATTCAATCAACTTCACAACCGTCTTGT 840 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 778 CTTTCGTTGCAGAGTTTCGTGAGTCCTACATTGATTCAATCAACTTCACAACCTTCTTGT 837 Query 841 CATATTGCTTCGTACTGCATTCAACCTCCTTGCATAGATCCATCCTGCAAATTACCTGTA 900 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 838 CATATAGCTTCGTACTGTATTCAACCTCCTTGCATAGATCCATCCTGCAAATTACCTGTA 897 Query 901 GCCTGTATCCAACCATCGTGCTTCAAGCCTCGTTTCCTCAACAACAAACCACGAAAGGCG 960 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 898 GCCTGTATCCAACCATCATGCTTCAAGCCTCGGTTCCTCAACAACAAACCACGAAAGGCG 957 Query 961 AAAACCGAAAAAGCTGGTTCAGATTCACTCCCAATGCTAATAGCTGAGCCAACGGATGCG 1020 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 958 AAAACCGAAAAAGCTGGTTCAGATTCACTCCCAATGCTAATAGCTGAGCCAACGGCTGCT 1017 Query 1021 CGGTCTATGTCATTCGTTGGCACGCATGAGTATTTAGCTCCTGAGATCATAAGAGGAGAT 1080 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1018 CGATCTATGTCATTCGTTGGCACGCATGAGTATTTAGCTCCTGAGATCATAAGAGGAGAT 1077 Query 1081 GGTCATGGAAGTTCTGTTGATTGGTGGACTTTTGGTATATTTCTCTACGAGTTGTTAACC 1140 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 GGTCATGGAAGTTCTGTGGATTGGTGGACTTTTGGTATATTTCTCTACGAGTTGTTAACC 1137 Query 1141 GGGAAAACACCATTCAAAGGAAACGGAAACCGCGAAACGCTCTTCAATGTTGTTGGGCAA 1200 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1138 GGGAAAACGCCATTCAAAGGAAACGGAAACCGCGAAACGCTCTTCAATGTTGTTGGACAA 1197 Query 1201 CCG-TTAAAGTTTCCCGAAGGATCTATAAGCTTTGCAGCTAAGGATTTGATTCGAGGTTT 1259 ||| |||| |||||| |||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 1198 CCGCTTAA-GTTTCCGGAAGGATCTATAAGCTTTGCAGCTAAAGATTTGATTAGAGGTTT 1256 Query 1260 GCTAACTAAAGATCCTAAGAAGAGATTAGGATTCAAGAAAGGTGCTACAGAGATAAAGCA 1319 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 1257 GCTAACTAAAGATCCTAAGAAGAGACTAGGGTTCAAGAAAGGTGCTACAGAGATAAAGCA 1316 Query 1320 ACATCCTTTCTTCAACAATGTCAATTGGGCTCTAATAAGAAGCACAACCCCACCAGAAAT 1379 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1317 ACATCCTTTCTTCAATAATGTCAATTGGGCTCTAATCAGAAGCACAACCCCACCAGAAAT 1376 Query 1380 ACCGAAACCAATCGATCTTTCGATACTAAATGAAACCCTCAAGTCATCGGTTCAACAACA 1439 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1377 ACCGAAACCGATCGATCTTTCGATACTAAATGAAACCCTCAAGTCATCAGTTCAACAACA 1436 Query 1440 AGGCAAGCATTCAAAACAATCAGATTCATCATCTGGTCCTTATTTAGATTTTGAGTTCTT 1499 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1437 AGGCAAGCATTCAAAACAATCAGATTCATCATCAGGTCCTTATTTAGATTTTGAGTTCTT 1496 Query 1500 CTA 1502 ||| Sbjct 1497 CTA 1499 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74146204965 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5