BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg356158

Length=633
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G38360.1 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   664    0.0  


> AT5G38360.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:15331711-15333625 REVERSE LENGTH=1282
Length=1282

 Score =  664 bits (359),  Expect = 0.0
 Identities = 432/466 (93%), Gaps = 9/466 (2%)
 Strand=Plus/Plus

Query  144   GGAAAATGCGTTTCCAGAACTTTCAGGGGCTGTACTTGTTTGCTCGGTTCCACCTTCGGG  203
             |||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||| ||
Sbjct  567   GGAAAATGCGTTTCCAGAGCTTTCAGGGGCGGTAATGGTTTGCTCGGTTCCACCTTCCGG  626

Query  204   TAATAGTGGCTTAGTGTTACGTTATCTCTTCTCTAAACCTGTGGCTGCTTTTAAGGTTAC  263
             |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  627   TAATAGCGGCTTAGTGTTACGTTATCTCTTTTCTAAACCTGTGGCTGCTTTTAAGGTTAC  686

Query  264   TCTCAGTTTAGCTGCTAAAGGTTTTCAGAAATCTATTCCTCTTTGTCGAGAAACATTCTT  323
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  687   TCTCAGTTTAGCTGCTAAAGGTTTTCAGAAATCTATTCCTCTTTGTCGAGAAACATTCTT  746

Query  324   CTCTCAAGCTATGGATGATCAACTTGTGAAGCGTTACCAGGATCTTATGA-TAGAGAGTT  382
             ||||||||| |||||||||||||||||||||||      | ||||||||| | |||||||
Sbjct  747   CTCTCAAGCCATGGATGATCAACTTGTGAAGCG------G-ATCTTATGAGT-GAGAGTT  798

Query  383   CACGGATGCCGCTGTTTGATCTGAGGAAGCTAAACGCATCACTTCCAGTACCAAAACCAA  442
             |||| || ||| |||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct  799   CACGAATACCGTTGTTTGATTTGAGAAAGCTAAACGCATCACTTCCAGTACCAAAACCAA  858

Query  443   TGGAAAATTCTACAAATGTTCTTGTTTTAGGTGCCAAAGATGACTTCATAGTGGATGATG  502
             |||| ||||| || || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct  859   TGGAGAATTCGACCAAGGTTCTTGTTTTAGGTGCCAAAGATGACTTCATAGTGGACGATG  918

Query  503   AGGGGCTGAAGGAAACCGGGCGGTTTTATGAGGTTGAACCGGTTTGTATTGAAGGTGTTG  562
             | || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct  919   AAGGACTGAAGGAAACCGGGAGGTTTTATGAGGTTGAACCGGTTTGTATTAAAGGTGTTG  978

Query  563   CTCATGACATGATGCTAGATTGTTCATGGGAGAAAGGTTCTGAGGT  608
             |||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct  979   CTCATGACATGATGCTTGATTGTTCATGGGAGAAAGGTGCTAAGGT  1024



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 30542361376


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5