BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg356160

Length=645
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G38360.1 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   459    2e-128


> AT5G38360.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:15331711-15333625 REVERSE LENGTH=1282
Length=1282

 Score =  459 bits (248),  Expect = 2e-128
 Identities = 319/352 (91%), Gaps = 9/352 (3%)
 Strand=Plus/Plus

Query  270   GGTTACTCTTAGTTTAGCTGCTAAAGGTTTTCAGAAATCTATTCCTCTTTGTCGAGAAAC  329
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  681   GGTTACTCTCAGTTTAGCTGCTAAAGGTTTTCAGAAATCTATTCCTCTTTGTCGAGAAAC  740

Query  330   ATTCTTCTCTCAAGCTATGGATGATCAACTTGTGAAGCGTTACCAGGATCTTATGACAGA  389
             ||||||||||||||| ||||||||||||||||||||  |    | |||||||||||  ||
Sbjct  741   ATTCTTCTCTCAAGCCATGGATGATCAACTTGTGAA--G----C-GGATCTTATGAGTGA  793

Query  390   GAGTTCACGGATGCCGCTGTTTGATCTGAGGAAGCTAAGCGCCTCACTTCCGGTACCAAA  449
             ||||||||| || ||| |||||||| |||| ||||||| ||| |||||||| ||||||||
Sbjct  794   GAGTTCACGAATACCGTTGTTTGATTTGAGAAAGCTAAACGCATCACTTCCAGTACCAAA  853

Query  450   ACCAATGGAGAATTCGACAAAAGTTCTTGTTTTAGGTGCCAAAGATGACTTCATAGTGGA  509
             |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct  854   ACCAATGGAGAATTCGACCAAGGTTCTTGTTTTAGGTGCCAAAGATGACTTCATAGTGGA  913

Query  510   TGATGAGGGGCTGAAGGAAACCGGGTGGTTTTATTGTG-TCGAACCGGTTTGTATTGAAG  568
              ||||| || ||||||||||||||| |||||||| | | | ||||||||||||||| |||
Sbjct  914   CGATGAAGGACTGAAGGAAACCGGGAGGTTTTAT-GAGGTTGAACCGGTTTGTATTAAAG  972

Query  569   GTGTTGCTCATGACATGATGCTAGATTGTTCATGGAAGAAAGGTGCTGAGGT  620
             |||||||||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct  973   GTGTTGCTCATGACATGATGCTTGATTGTTCATGGGAGAAAGGTGCTAAGGT  1024


 Score =  339 bits (183),  Expect = 3e-92
 Identities = 201/209 (96%), Gaps = 4/209 (2%)
 Strand=Plus/Plus

Query  1    ATGGAGGTAATCGAACA-ACGAAGAA-GCAAATCCGAAAGAGAGAATCCACCATTGGTGT  58
            |||||||||||||| || | ||| ||  ||||||||||||||||||||||||||||||||
Sbjct  223  ATGGAGGTAATCGAGCAGA-GAA-AATCCAAATCCGAAAGAGAGAATCCACCATTGGTGT  280

Query  59   TTGTACATGGAAGCTATCACGCAGCTTGGTGTTGGGCTGAACATTGGTTACCTTTCTTCT  118
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  281  TTGTACATGGAAGCTATCACGCAGCTTGGTGTTGGGCTGAAAATTGGTTACCTTTCTTCT  340

Query  119  CTTCTTCTGGGTTTGATTCTTATGCTGTTAGTTTACTAGGTCAGGGTGAAAGTGATGAAC  178
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  341  CTTCTTCTGGGTTTGATTCTTATGCTGTTAGTTTATTAGGTCAGGGTGAAAGTGATGAAC  400

Query  179  CTTTGGGAACAGTTGCTGGAACACTTCAG  207
            |||||||||||||||||||||||||||||
Sbjct  401  CTTTGGGAACAGTTGCTGGAACACTTCAG  429



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 31145171140


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5