BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg356317 Length=1140 Score E Sequences producing significant alignments: (Bits) Value AT5G46810.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1454 0.0 AT5G46820.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1362 0.0 > AT5G46810.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:18991164-18993376 FORWARD LENGTH=1127 Length=1127 Score = 1454 bits (787), Expect = 0.0 Identities = 973/1062 (92%), Gaps = 15/1062 (1%) Strand=Plus/Plus Query 88 AAGCCTCAAGAACCCGAATACGAATGCGTTGATATCTACAAACAACCTTCGCTACTACAC 147 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 10 AAGCCTCAAGAACCTGAATACGAATGCGTTGATATCTACAAACAACCTTCGCTACAACAC 69 Query 148 CCTCAACTCAAAAATCATCAAATCCAAATGAGACCGAGCGACGAATTCTTAGCCATGCTA 207 ||| ||||| ||||||| | ||||||||||||||||||||| ||| |||||||||||| Sbjct 70 CCTAAACTCCAAAATCACCGAATCCAAATGAGACCGAGCGATGAAGCCTTAGCCATGCTC 129 Query 208 TCAGGAGATACATCAGCAGAAAACTTATCAGACGATGAAATGGTTGCTGAGTTTGATATA 267 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 130 TCAGGAGATACATCATCAGAAAACTTATCAAACGATGAAATGGTTGCTGAGTTTGATATA 189 Query 268 CCAGAAGAAGGATGTCCACAAGGACAAGTACCAATCCATAAACCAAGAAATC-T--CAAC 324 ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 190 CCAGAAGAAGGATGTCCTCAAGGACAAGTACCAATCCATAAACCAAGAAATAATTTCAAC 249 Query 325 CACACCGAGAAACCTTTTCAGCCTATTAATGGATATGGAACTGTTGGTCAACATGCTGCG 384 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 250 CACACCGAGAAACATTTTCAGCCTATTAATGGATTTGGAACTGTTGGTCAACATGCTGCG 309 Query 385 ATAATGAAGAAAATCGATGCTATCCCGTGGCGTGGAGCATCAGCATGGATTAGTATTTAC 444 ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct 310 GTAATGAAGAAAATCGATGCCACCCCGTGGCGTGGAGCATCAGCATGGATAAGTATTTAC 369 Query 445 CAACCTAAATTGAGAAATAAAGAGCAATTCAGCATGGCTTTGATTTGGCTCAATACTGAG 504 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 370 CAACCTAAATTGACAAATAAAGAGCAATTCAGCATGGCTTTCATTTGGCTCAATACTGAG 429 Query 505 AATCAAGGCGAACGCACCAGTGCTCAGTTTGGTTGGGCTGTGATTCCTGCATTATATGGC 564 || ||||||||||||||||||| || |||||||||||||||||||||||| |||||||| Sbjct 430 TATGAAGGCGAACGCACCAGTGCCCACTTTGGTTGGGCTGTGATTCCTGCACTATATGGC 489 Query 565 GATTA-CCGTACAAGACTTACTGCATATTGGAGTCCGGATAAACTCGAAAACGGATGTTA 623 ||| | ||||||| ||||||||||||| ||||||| |||| | |||||| ||||||||| Sbjct 490 GAT-AGCCGTACACGACTTACTGCATACTGGAGTCAAGATACATTCGAAAGCGGATGTTA 548 Query 624 CAATACGAAATGTAAGGGTTTCGTTCAAATTGACCGGAGAATCTTTCTTGGTGCCGGTTT 683 ||||| |||||||||||||||||||||||||| ||||| |||||||||| |||||||| Sbjct 549 CAATATAAAATGTAAGGGTTTCGTTCAAATTGATAGGAGACTCTTTCTTGGAGCCGGTTT 608 Query 684 TTCGAAAACCTCTGTGGTGGGAGGCACACAATTT-AAAGCTTTCTTTT-CAATCAATCAG 741 | |||| |||||||||||||||||| || ||||| |||||||| |||| ||||||||||| Sbjct 609 TGCGAACACCTCTGTGGTGGGAGGC-CAAAATTTTAAAGCTTT-TTTTGCAATCAATCAG 666 Query 742 GATCCAAAAACAAAGAATTTGCTGCTGACAGTCGGGAAGATTTACATAGGGTATTGGCCA 801 |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 667 GATCCAAAAACAAACAATTTGCTGCTGACAGTGGGGAAGATTTACTTAGGGTATTGGCCA 726 Query 802 GAGGAACTTCTACCTTATTTCTA-T-AATGGAGCGGAGGCAGTTATATATGGTGGATTCA 859 |||||||||||||||| |||| | | || ||||||||| ||||||||||||||||||| | Sbjct 727 GAGGAACTTCTACCTTTTTTC-ACTGAA-GGAGCGGAGTCAGTTATATATGGTGGATTGA 784 Query 860 CGAATGCTCCATCCGAAAACATTCAACTATTTGATATAGTTAGTCCACCGATGGGTAACG 919 ||||||||||||| || |||||||| ||| |||||||||| |||||||||||||||| Sbjct 785 CGAATGCTCCATCTGATGGCATTCAACCCTTTAATATAGTTAGCCCACCGATGGGTAACG 844 Query 920 GGAATAAACCGCTGGATGAGGAAGTGGATCTAAAACATACTTGTTATATGCACTCTCTTA 979 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 845 GGAACAAACCGCTGGATGAGGAAGTTGATCTAAAGCATACTTGTTATATGCACTCTCTTA 904 Query 980 AATATGTGACACCAGATTATAAGAGTGTCGATATTGATTCCGACAAGGTCACCGAAGTTG 1039 |||||||||||| |||||| |||||||||||| ||||| || |||||||| ||||||||| Sbjct 905 AATATGTGACACAAGATTACAAGAGTGTCGATGTTGATACCAACAAGGTCGCCGAAGTTG 964 Query 1040 CGGATGCAGGTAAATGTTACGACGTGATTTATTTTGATAAACTTGGGCAATATGGACAAG 1099 |||| ||||||| ||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 965 CGGACGCAGGTATATGTTACGACGCGATTTATTTTGATAAACTTGGGGGGTATGGACAAA 1024 Query 1100 CGTTTACCTTCGGTGGACCAGGTGGTT-TCTGTGATGTGTGA 1140 |||||||||||||||||||||||||| | |||||||||||| Sbjct 1025 CGTTTACCTTCGGTGGACCAGGTGGTCAT-TGTGATGTGTGA 1065 > AT5G46820.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:18993633-18996672 FORWARD LENGTH=1059 Length=1059 Score = 1362 bits (737), Expect = 0.0 Identities = 957/1058 (90%), Gaps = 35/1058 (3%) Strand=Plus/Plus Query 90 GCCTCAAGAACCCGAATACGAATGCGTTGATATCTACAAACAACCTTCGCTACTACACCC 149 |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 30 GCCTCAAGAACCTGAGTACGAATGCGTTGATATCTACAAACAACCTTCGCTACAACACCC 89 Query 150 TCAACTCAAAAATCATCAAATCCAAATGAGACCGAGCGACGAA-TTCTTAGCCATGCTAT 208 | ||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 90 TAAACTCCAAAATCACCAAATCCAAATGAGACCGAGCGACGAAGTTC-TAGCCATGCTAT 148 Query 209 CAGGAGATACATCAGCAGAAAACTTATCAGACGATGAAATGGTTGCTGAGTTTGATATAC 268 |||||||||||| ||| | | | |||||||||||||||||||||||||||||| Sbjct 149 CAGGAGATACAT---CAG----C--A--A-ACGATGAAATGGTTGCTGAGTTTGATATAC 196 Query 269 CAGAAGAAGGATGTCCACAAGGACAAGTACCAATCCATAAACCAAGAAATCTCAACCACA 328 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 197 CAGAAGAAGGATGTCCTCAAGGACAAGTACCAATCCATAAACCAAGAAATCTCAACCACA 256 Query 329 CCGAGAAACCTTTTCAGCCTATTAATGGATATGGAACTGTTGGTCAACATGCTGCGATAA 388 |||||||||| ||| |||||||||||||||||||||||||||| | ||| | ||| Sbjct 257 CCGAGAAACC-TTTAAGCCTATTAATGGATATGGAACTGTTGG----C-TGC--AG-TAA 307 Query 389 TGAAGAAAATCGATGCTATCCCGTGGCGTGGAGCATCAGCATGGATTAGTATTTACCAAC 448 |||||||||||||||| | ||| |||||||||||||| |||||| ||||||||||||||| Sbjct 308 TGAAGAAAATCGATGCCACCCCATGGCGTGGAGCATCTGCATGGTTTAGTATTTACCAAC 367 Query 449 CTAAATTGAGAAATAAAGAGCAATTCAGCATG-GCTTTGATTTGGCTCAATACTGAGAAT 507 ||||||||| ||||||||| ||||| |||||| | ||| || ||||||||||||||| || Sbjct 368 CTAAATTGACAAATAAAGACCAATTTAGCATGAG-TTTTATGTGGCTCAATACTGAGTAT 426 Query 508 CAA-GGCGAACGCACCAGTGCTCAGTTTGGTTGGGCTGTGATTCCTGCATTATATGGCGA 566 || ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 427 -AATGGCGAACGCACCAATGCCCAGTTTGGTTGGGCTGTGATTCCTGCATTATATGGCGA 485 Query 567 TTACCGTACAAGACTTACTGCATATTGGAGTCCGGATAAACTCGAAAACGGATGTTACAA 626 | |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct 486 TGACCGTACAAGACTTACGGCATACTGGAGTCCGGATAAAATCGAAAACGGATGTTACAA 545 Query 627 TACGA-AATGTAAGGGTTTCGTTCAAATTGACCGGAGAATCTTTCTTGGTGCCGGTTTTT 685 || | ||||||| || |||||||||| ||||| ||| || ||||||| ||||||||| Sbjct 546 TA-TACAATGTAAAGGCTTCGTTCAAACTGACCATAGAGTCGCTCTTGGTACCGGTTTTT 604 Query 686 CGAAAACCTCTGTGGTGGGAGGC-ACACAATTTAAAGCTTTCTTTTCAATCAATCAGGAT 744 |||| |||||||||||||||||| || |||| ||||||||||||| |||||| ||||||| Sbjct 605 CGAACACCTCTGTGGTGGGAGGCAAC-CAATATAAAGCTTTCTTTGCAATCAGTCAGGAT 663 Query 745 CCAAAAACAAAGAATTTGCT-GCTGACAGTCGGGAAGATTTACATAGGGTATTGGCCAGA 803 |||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||| Sbjct 664 CCAAAAACAAAGAATTTG-TGGCTGACAGTCCAGAAGATTAACATAGGGTATTGGCCAGA 722 Query 804 GGAACTTCTACCTTATTTCTATAATGGAGCGGAGGCAGTTATATATGGTGGATTCACGAA 863 |||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 723 GGAACTTCTACCTTTTTTCAATGATGGAGCGGAGTCAGTTATATATGGTGGATTCACGAA 782 Query 864 TGCTCCATCCGAAAACATTCAACTATTTGATATAGTTAGTCCACCGATGGGTAACGGGAA 923 ||||||||| || ||||||||||| ||||| |||||||| ||||| |||||||||||||| Sbjct 783 TGCTCCATCTGATAACATTCAACTCTTTGAAATAGTTAGCCCACCTATGGGTAACGGGAA 842 Query 924 TAAACCGCTGGATGAGGAAGTGGATCTAAAACATACTTGTTATATGCACTCTCTTAAATA 983 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 843 CAAACCGCTGGATGAGGAAGTGGATCTAAAACATACTTGTTATATGCACTCTCTTAAGTA 902 Query 984 TGTGACACCAGATTATAAGAGTGTCGATATTGATTCCGACAAGGTCACCGAAGTTGCGGA 1043 ||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||| Sbjct 903 TGTGACACCAGATTACAAGAGTGTCGATGTTGATTCCAACAAGGTCGCCGAAGTTGCGGA 962 Query 1044 TGCAGGTAAATGTTACGACGTGATTTATTTTGATAAACTTGGGCAATATGGACAAGCGTT 1103 ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||| Sbjct 963 CGCAGGTATATGTTACGACGCGATTTATTTTGATAAACTTGGGCGGTATGGACAAACGTT 1022 Query 1104 TACCTTCGGTGGACCAGGTGGTT-TCTGTGATGTGTGA 1140 ||||||||||||||||||||||| | |||||||| ||| Sbjct 1023 TACCTTCGGTGGACCAGGTGGTTAT-TGTGATGTTTGA 1059 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55923407130 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5