BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg356397 Length=363 Score E Sequences producing significant alignments: (Bits) Value AT5G46030.1 | Symbols: | unknown protein; CONTAINS InterPro DO... 593 3e-169 > AT5G46030.1 | Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:18670117-18671373 FORWARD LENGTH=732 Length=732 Score = 593 bits (321), Expect = 3e-169 Identities = 351/365 (96%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 1 ATGGGAAAGAGGAAATCAAGAGCAAAGCCTGCTCCTACGAAGCGAATGGATAAGCTTGAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 ATGGGAAAGAGGAAATCAAGAGCAAAGCCTGCTCCTACGAAGCGAATGGATAAGCTTGAC 194 Query 61 ACAATCTTTAGTTGTCCTTTCTGCAATCACGGCTCCAGTGTCGAATGCATAATTGATATG 120 |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| Sbjct 195 ACAATCTTTAGTTGTCCTTTCTGCAATCACGGGTCTAGTGTCGAATGCATCATTGATATG 254 Query 121 AAGCATCTGATTGGTAAAGCAGCTTGTAGAATCTGTGAAGAAAGCTTTAGTACTACTATC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 AAGCATCTGATTGGTAAAGCAGCTTGTAGAATCTGTGAAGAAAGCTTTAGTACTACTATC 314 Query 181 ACAGCTTTGACTGAAGCTATAGACATTTATAGCGAATGGATCGATGAGTGCGAGAGGGTT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315 ACAGCTTTGACTGAAGCTATAGACATTTATAGCGAATGGATCGATGAGTGCGAGAGGGTT 374 Query 241 AATACCGCGGAAGATGATGTTGTGCaagaagaagaagaagagg-aggaagtag-aagaag 298 |||||||||||||||||||||||||||||||| |||||||| | || ||| || |||||| Sbjct 375 AATACCGCGGAAGATGATGTTGTGCAAGAAGAGGAAGAAGAAGTAG-AAG-AGGAAGAAG 432 Query 299 aagaagaggaagaagaggatgatgaagaTGACCGTGTCTCTGTCAAAAGGAAGTATAATT 358 |||| || ||||| ||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 433 AAGAGGAAGAAGAGGAGGATGATGAAGATGACCATGTCTCTGTCAAAAGGAAGTATAACT 492 Query 359 TCTGA 363 ||||| Sbjct 493 TCTGA 497 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17040766911 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5