BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg357447 Length=1050 Score E Sequences producing significant alignments: (Bits) Value AT5G52060.1 | Symbols: ATBAG1, BAG1 | BCL-2-associated athanoge... 721 0.0 > AT5G52060.1 | Symbols: ATBAG1, BAG1 | BCL-2-associated athanogene 1 | chr5:21152214-21154244 REVERSE LENGTH=1767 Length=1767 Score = 721 bits (390), Expect = 0.0 Identities = 481/521 (92%), Gaps = 21/521 (4%) Strand=Plus/Plus Query 1 ATGATGAAGATGATGAGAAACAAACCGACAAATCTTCCGACGGC-GGT-CGGC----GGT 54 |||||||||||||||||||||||||||||||||||||||||||| ||| | | || Sbjct 504 ATGATGAAGATGATGAGAAACAAACCGACAAATCTTCCGACGGCGGGTATGACTAATGGC 563 Query 55 GGTAGAGGTT----C--C---------GGCGGCGGCAGGGAGTCAGGCGGTCATGATTGG 99 |||||||||| | | ||||||||||||||||||||||||| ||||| | Sbjct 564 GGTAGAGGTTCCGGCGGCGGTGGTGGTGGCGGCGGCAGGGAGTCAGGCGGTCGTGATTTG 623 Query 100 GAAATGAGACCTGGTGGTATGTTGGTTCAGAAACGTAACCCGGATTTGGATCCTGTTGGA 159 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 624 GAAATTAGACCTGGTGGTATGTTGGTTCAGAAACGTAACCCGGATTTGGATCCTGTCGGA 683 Query 160 GCTCCACCACCGCCGTTGATCAGAGTTAGGATCAAGTACGGTGCCGTGTACCATGAGATC 219 |||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 684 CCTCCACCACCACCGATGATCAGAGTTAGAATCAAGTACGGTGCCGTCTACCATGAGATC 743 Query 220 AATATTAGTCCTCAAGCTTCATTTGGGGAGCTAAAGAAGATGTTGACTGGACCAACGGGT 279 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 744 AATATTAGTCCTCAAGCTTCTTTTGGGGAGCTAAAGAAGATGTTGACTGGACCAACGGGT 803 Query 280 ATTCATCATCAAGATCAGAAGCTAATGTATAAAGATAAAGAGAGGGATTCGAAGGCGTTT 339 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 804 ATTCATCATCAAGATCAGAAGCTAATGTATAAAGATAAAGAGAGGGATTCGAAGGCGTTC 863 Query 340 CTCGATGTTTCGGGAGTGAAAGATAAATCCAAGATGGTGCTTATCGAAGATCCGATTAGC 399 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||| Sbjct 864 CTCGATGTTTCGGGAGTGAAAGATAAATCTAAGATGGTGCTTATAGAAGACCCGCTTAGC 923 Query 400 CAAGAGAAACGGTTTTTGGAGATGAGGAAGATTGCTAAAACCGAAAAGGCGTCGAAAGCG 459 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 924 CAAGAGAAACGGTTTTTGGAGATGAGGAAGATTGCTAAAACCGAAAAGGCGTCTAAAGCG 983 Query 460 ATATCGGATATTAGCCTTGAAGTTGATAGGCTCGGCGGACG 500 ||||||||||||||||||||||||||||||||||||||||| Sbjct 984 ATATCGGATATTAGCCTTGAAGTTGATAGGCTCGGCGGACG 1024 Score = 701 bits (379), Expect = 0.0 Identities = 458/494 (93%), Gaps = 13/494 (3%) Strand=Plus/Plus Query 568 ATGGTAATTAAGAAAGGAGGGAAGATTGCGGAGAAAGATCTTGTAACGGTTATCGAATTG 627 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1041 ATGGTAACTAAAAAAGGAGGGAAGATTGCGGAGAAAGATCTTGTAACGGTTATCGAATTG 1100 Query 628 TTGATGAATGAGTTGATAAAGTTGGATGCGATTGTGGCTGAAGGAGATGTGAAGCTACAA 687 |||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||| Sbjct 1101 CTGATGAATGAGTTGATTAAGTTGGATGCGATTGTAGCTGAAGGAGATGTCAAGTTACAA 1160 Query 688 AGAAAGATGCAGGTGAAGAGAGTGCAGAATTATGTCGAAACACTCGATGTCTTGAAGGTG 747 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 1161 AGAAAGATGCAGGTGAAGAGAGTGCAGAATTATGTGGAAACACTCGATGCCTTGAAGGTG 1220 Query 748 --AAA----ATGGCAAATGGGCAACAGAAACAGT-TAG--GTGCTCAGCGACTTGCACCG 798 ||| ||||| ||||||||||||||||||| || ||||||| ||||||||||| Sbjct 1221 AAAAACTCCATGGCTAATGGGCAACAGAAACAGTCAAGTACTGCTCAGAGACTTGCACCG 1280 Query 799 ATTCAAGAACATAACAATGAAGAGAGACAAGAACAGAAACCGATACAATCGCTCATGGAC 858 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1281 ATTCAAGAACATAACAATGAAGAGAGACAAGAACAGAAACCGATACAATCGCTCATGGAC 1340 Query 859 ATGCCGATACAATACAAAGAGAAGAAGCAAGAGATTGAAGAGGAGCCAAGGAATTCAGGG 918 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1341 ATGCCGATACAATACAAAGAGAAGAAGCAAGAGATTGAAGAGGAGCCTAGGAATTCAGGG 1400 Query 919 TCAGGACCATTTGTGTTAGATTCTTCTACTAAATGGGAAACATTTGATCATCATCCTGCG 978 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| | | Sbjct 1401 GAAGGACCATTTGTGTTAGATTCTTCTGCTAAATGGGAAACATTCGATCATCATCCCGTG 1460 Query 979 ACGCCATTGAGTTCGGCTACTGC-AAATAATCAA-GCGATCCCGCCCAGGTTCAATTGGG 1036 ||||||||||| ||| ||||||| ||| ||| || ||||||||||||||||| ||||||| Sbjct 1461 ACGCCATTGAGCTCGACTACTGCGAAA-AAT-AACGCGATCCCGCCCAGGTTTAATTGGG 1518 Query 1037 AATTCTTTGATTGA 1050 |||||||||||||| Sbjct 1519 AATTCTTTGATTGA 1532 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51490000675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5