BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg357912 Length=1128 Score E Sequences producing significant alignments: (Bits) Value AT5G56950.1 | Symbols: NFA03, NFA3, NAP1;3 | nucleosome assembl... 1895 0.0 AT4G26110.1 | Symbols: NAP1;1, ATNAP1;1 | nucleosome assembly p... 1109 0.0 > AT5G56950.1 | Symbols: NFA03, NFA3, NAP1;3 | nucleosome assembly protein 1;3 | chr5:23032449-23035661 FORWARD LENGTH=1656 Length=1656 Score = 1895 bits (1026), Expect = 0.0 Identities = 1094/1127 (97%), Gaps = 3/1127 (0%) Strand=Plus/Plus Query 1 ATGAGCAACGATAAGGACAATTTCAATGTCAGCGATCTCACTGCTGCTCTTAAAGATGAG 60 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 170 ATGAGCAACGATAAGGACAGTTTCAATGTCAGCGATCTCACTTCTGCTCTTAAAGATGAG 229 Query 61 GATCGAGCTGGTCTTGTCAACGCTCTTAAGAACAAGTTGCAGAATCTAGCTGGACAACAT 120 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 230 GATCGAGCTGGTCTTGTCAACGCTCTTAAGAACAAGCTCCAGAATCTAGCTGGACAACAT 289 Query 121 TCCGATGTGCTCGAGAATCTGACTCCTAAAATCAGAAGACGTGTTGAGGTTTTACGCGAG 180 || ||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||| Sbjct 290 TCTGATGTGCTCGAGAATCTGACTCCTAAAATTAGAAGGCGTGTTGAGGTTTTGCGGGAG 349 Query 181 ATTCAGGGCAAACATGATGAAATAGAGACGAAATTCCGCGAGGAGAGAGCTGCTCTTGAA 240 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 350 ATTCAGGGCAAACATGATGAAATAGAGACAAAATTCCGCGAGGAGAGAGCTGCTCTTGAA 409 Query 241 GCCAAGTATCAAAAGTTATATCAGCCTTTGTATACCAAGCGTTATGAGATTGTGAATGGA 300 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 410 GCCAAGTATCAAAAGTTATATCAGCCTTTGTATAACAAGCGTTATGAGATTGTGAATGGA 469 Query 301 GCTACTGAAGTTGAAGGGGCTCCAGATGATGCTAAGATGGACCATGGAGATGAGAAAACT 360 |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct 470 GCTACTGAAGTTGAAGGGGCTCCAGAGGATGCTAAGATGGACCAAGGAGACGAGAAAACT 529 Query 361 GCAGAAGAGAAAGGAGTCCCTAGTTTCTGGCTGACCGCTCTGAAAAACAATGATGTTATT 420 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 530 GCAGAAGAGAAAGGAGTCCCTAGTTTCTGGCTGACTGCTCTGAAAAATAATGATGTTATA 589 Query 421 TCTGAGGAGATCACAGAGCGTGATGAAGGAGCCCTTATATATCTTAAAGATATCAAGTGG 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 590 TCTGAAGAGATCACAGAGCGTGATGAAGGAGCCCTTATATATCTTAAAGATATCAAGTGG 649 Query 481 TGCAAGATTGAAGAACCAAAGGGATTCAAACTTGAGTTTTTCTTCGACCAGAATCCTTAC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 650 TGCAAGATTGAAGAACCAAAGGGATTCAAACTTGAGTTTTTCTTCGACCAGAATCCTTAC 709 Query 541 TTCAAAAACACCCTATTAACAAAGGCATATCATATGATTGATGAAGATGAGCCTCTGCTT 600 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 710 TTCAAAAACACCCTATTAACAAAGGCGTATCATATGATTGATGAAGATGAGCCTCTGCTT 769 Query 601 GAGAAGGCTATTGGGACGGAGATTGATTGGTATCCTGGAAAATGCTTAACTCAGAAGATT 660 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 770 GAGAAGGCTATTGGGACAGAGATTGATTGGTATCCTGGAAAATGCTTAACTCAGAAGATT 829 Query 661 CTTAAGAAGAAGCCTAAGAAAGGTGCAAAGAATGCCAAGCCAATTACCAAAACTGAAGAT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 830 CTTAAGAAGAAGCCTAAGAAAGGTGCAAAGAATGCCAAGCCAATTACCAAAACTGAAGAT 889 Query 721 TGTGAAAGCTTTTTCAACTTCTTCAATCCTCCCCAAGTTCCCGATGATGATGAAGACATT 780 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 890 TGTGAAAGCTTCTTCAACTTCTTCAATCCTCCCCAAGTTCCTGATGATGATGAAGACATT 949 Query 781 GACGAAGAAAGAGCCGAGGAACTTCAGAATCTGATGGAACAAGATTATGACATTGGTTCT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 950 GACGAAGAAAGAGCCGAGGAACTTCAGAATCTGATGGAACAAGATTATGACATTGGTTCT 1009 Query 841 ACAATCCGGGAGAAGATTATACCTCATGCTGTCTCATGGTTTACTGGTGAGGCTATTGAG 900 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1010 ACAATCCGGGAGAAGATCATACCTCATGCTGTCTCATGGTTTACTGGTGAGGCTATTGAG 1069 Query 901 GGAGAGGAGTTTGAAATAGACAatgacgatgaagatgatatcgatgaggatgaagatgag 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1070 GGAGAGGAGTTTGAAATAGACAATGACGATGAAGATGATATCGATGAGGATGAAGATGAG 1129 Query 961 gatgaagaagatgaagacgaagatgaggaagaagacgatgatgaagatgaggaggaagaa 1020 |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||| Sbjct 1130 GATGAAGAAGATGAAGACGAAGATGAGGAAGAAGACGACGA--A-GATGAGGAGGAAGAA 1186 Query 1021 gtaagcaagaCCAAAAAGAAGCCGTCAGTCTTACACAAGAAAGGAGGGAGACCTCAGCTT 1080 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 1187 GTAAGCAAGACCAAAAAGAAGCCATCAGTCTTACACAAGAAAGGAGGGAGACCTCAGGTT 1246 Query 1081 AACGATGGTCAGCAAGGAGAGAGGCCTCCTGAATGCAAGCAACAGTA 1127 | ||||| ||| |||||||||||||||||||||||||| |||||||| Sbjct 1247 ACCGATGATCAACAAGGAGAGAGGCCTCCTGAATGCAAACAACAGTA 1293 > AT4G26110.1 | Symbols: NAP1;1, ATNAP1;1 | nucleosome assembly protein1;1 | chr4:13232595-13235879 FORWARD LENGTH=1613 Length=1613 Score = 1109 bits (600), Expect = 0.0 Identities = 968/1142 (85%), Gaps = 39/1142 (3%) Strand=Plus/Plus Query 1 ATGAGCAACGATAAGGACAATTTCAATGTCAGCGATCTCACTGCTGCTCTTAAAGATGAG 60 ||||||||||| ||||| | ||||| ||| |||||| |||||||||||||| || ||| Sbjct 118 ATGAGCAACGACAAGGATAGCTTCAACGTCTCCGATCTTACTGCTGCTCTTAAGGACGAG 177 Query 61 GATCGAGCTGGTCTTGTCAACGCTCTTAAGAACAAGTTGCAGAATCTAGCTGGACAACAT 120 ||||||||||| |||||||| ||||| ||||||||| |||||||||| ||||| || | | Sbjct 178 GATCGAGCTGGCCTTGTCAATGCTCTAAAGAACAAGCTGCAGAATCTGGCTGGTCAGCGT 237 Query 121 TCCGATGTGCTCGAGAATCTGACTCCTAAAATCAG-AAGACGTGTTGA-GGTTTTACGCG 178 || ||||||||||||||||||||||| || | || ||| || ||||| | || | | | Sbjct 238 TCTGATGTGCTCGAGAATCTGACTCCCAATGTGAGAAAG-CGCGTTGATGCCTTGA-GGG 295 Query 179 AGATTCAGGGCAAACATGATGAAATAGAGACGAAATTCCGCGAGGAGAGAGCTGCTCTTG 238 | || ||| || ||||||||||| ||||| | |||||||| |||||||||||| ||||| Sbjct 296 ATATACAGAGCCAACATGATGAACTAGAGGCAAAATTCCGTGAGGAGAGAGCTATTCTTG 355 Query 239 AAGCCAAGTATCAAAAGTTATATCAGCCTTTGTATACCAAGCGTTATGAGATTGTGAATG 298 ||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||| Sbjct 356 AAGCCAAGTATCAAACGCTGTATCAGCCTTTGTATGTCAAGCGTTATGAGATTGTGAATG 415 Query 299 G-AGCTACTGAAGTTGAAGGGGCTCC--A-GATGATGCTAAGATGGACCATGGAGATGAG 354 | | |||||||||||||| |||||| | |||||| | ||| ||||||| ||||| ||| Sbjct 416 GCA-CTACTGAAGTTGAACTGGCTCCAGAGGATGATACCAAGGTGGACCAAGGAGAGGAG 474 Query 355 AAAACTGCAGAAGAGAAAGGAGTCCCTAGTTTCTGGCTGACCGCTCTGAAAAACAATGAT 414 ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct 475 AAAACTGCAGAAGAGAAAGGAGTTCCAAGTTTCTGGCTGACAGCTCTGAAAAATAACGAT 534 Query 415 GTTATTTCTGAGGAGATCACAGAGCGTGATGAAGGAGCCCTTATATATCTTAAAGATATC 474 |||||||| |||||| ||||||||||||||||||| || || | ||||||||||||||| Sbjct 535 GTTATTTCCGAGGAGGTCACAGAGCGTGATGAAGGGGCTCTCAAATATCTTAAAGATATT 594 Query 475 AAGTGGTGCAAGATTGAAGAACC-AAAGGGATTCAAACTTGAGTTTTTCTTCGACCA-GA 532 |||||||||||||||||||| || ||| ||||||||||||||||||||||| || || || Sbjct 595 AAGTGGTGCAAGATTGAAGAGCCTAAA-GGATTCAAACTTGAGTTTTTCTTTGA-CACGA 652 Query 533 ATCCTTACTTCAAAAACACCCTATTAACAAAGGCATATCATATGATTGATGAAGATGAGC 592 |||| || || || ||||| | || |||||| | ||||||||||||||||||||||||| Sbjct 653 ATCCGTATTTTAAGAACACTGTCTTGACAAAGTCTTATCATATGATTGATGAAGATGAGC 712 Query 593 CTCTGCTTGAGAAGGCTATTGGGACGGAGATTGATTGGTATCCTGGAAAATGCT-TAACT 651 | ||||||||||||||||| ||||| || |||||||||||||||||||| || | ||||| Sbjct 713 CACTGCTTGAGAAGGCTATGGGGACAGAAATTGATTGGTATCCTGGAAAGTG-TCTAACT 771 Query 652 CAGAAGATTCTTAAGAAGAAGCCTAAGAAAGGTGCAAAGAATGCCAAGCCAATTACCAAA 711 ||||||||||| ||||||||||||||||||||| |||||||| | || ||||| ||| || Sbjct 772 CAGAAGATTCTCAAGAAGAAGCCTAAGAAAGGTTCAAAGAATACTAAACCAATCACC-AA 830 Query 712 ACT-GAAGATTGTGAAAGCTTTTTCAACTTCTTCAATCCTCCCCAAGTTCCCGATGATGA 770 ||| ||||||||||||||||| ||||||||||| | |||||| ||||||| ||||| || Sbjct 831 ACTCGAAGATTGTGAAAGCTTCTTCAACTTCTTTAGTCCTCCAGAAGTTCCGGATGAAGA 890 Query 771 TGAAGACATTGACGAAGAAAGAGCCGAGGAACTTCAGAATCTGATGGAACAAGATTATGA 830 |||||| || ||||| |||||||| ||||| ||||| || |||||||||||||||||||| Sbjct 891 TGAAGATATCGACGAGGAAAGAGCTGAGGATCTTCAAAACCTGATGGAACAAGATTATGA 950 Query 831 CATTGGTTCTACAATCCGGGAGAAGATTATACCTCATGCTGTCTCATGGTTTACTGGTGA 890 ||| || ||||| || ||||| |||||||| |||| |||||||||||||||||||||||| Sbjct 951 CATCGGATCTACTATTCGGGAAAAGATTATTCCTCGTGCTGTCTCATGGTTTACTGGTGA 1010 Query 891 GGCTATTGAGGGAGAGGAGTTTGAAATAGACAatgacgatgaagatgatatcgatgagga 950 |||||| || | |||||| ||||||||||| | || || |||||||| || |||||||| Sbjct 1011 GGCTATGGAAGCAGAGGATTTTGAAATAGATGACGATGAGGAAGATGACATTGATGAGGA 1070 Query 951 tgaagatgaggatgaagaagatgaagacgaagatgaggaagaagacgatgatgaagatga 1010 |||||||||||| | || || | || | |||||||| | ||||||||||| ||| Sbjct 1071 TGAAGATGAGGA--A-GACGA--A-GA-G--GATGAGGA-G--GACGATGATGA---TGA 1115 Query 1011 ggaggaagaagtaagcaagaCCAAAAAGAAGCCGTCAGTCTTACA-CAAGAAAGGAGGGA 1069 ||| ||||||| ||||||||||||||||||||| ||| || || |||||| ||||||| Sbjct 1116 GGATGAAGAAGAAAGCAAGACCAAAAAGAAGCCATCAATCGG-CAACAAGAAGGGAGGGA 1174 Query 1070 GACCTCAGCT--TAAC-GATGGTCAGCAAGGA-GAGAGGCCTCCTGAATGCAAGCAACAG 1125 || ||||| | | || ||| | |||| | |||||||| || ||||||||||||||| Sbjct 1175 GATCTCAGATAGTTGGTGAAGGTAAACAAG-ATGAGAGGCCACCCGAATGCAAGCAACAG 1233 Query 1126 TA 1127 || Sbjct 1234 TA 1235 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55321000590 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5