BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg358000 Length=489 Score E Sequences producing significant alignments: (Bits) Value AT5G57820.1 | Symbols: | zinc ion binding | chr5:23428601-2342... 691 0.0 > AT5G57820.1 | Symbols: | zinc ion binding | chr5:23428601-23429346 FORWARD LENGTH=667 Length=667 Score = 691 bits (374), Expect = 0.0 Identities = 448/483 (93%), Gaps = 7/483 (1%) Strand=Plus/Plus Query 1 ATGGATTCGAAAGCAAGAGACGATGAAAAAACGCTAAACTTGGATTCGAAAGCAAAAGAC 60 |||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||| || Sbjct 1 ATGGATTCGAAAGCAAAAGACGATGAAAAAACTCTAAACATGGATTCCAAAGCAAAATAC 60 Query 61 GGTGAAGAAGCTCTAAACATGCTCTTAAAGCTTCAACAGAGAGTTGATAAAATCCATTCT 120 ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 61 GGTAAAGAAGCTCTAGACATGCTCTTAAAGCTTCAACAGAGAGTTGATGAAATCCATTCT 120 Query 121 GAGTTGCAATCTTCGGGAACATCCGCAACAACTTCATCTGATATTCAAAACATCTACGAC 180 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 121 GAGTTGCAATCTTCGGGAGCATCCGCAACAACTTCATCTGATATTCAAAACATCTACAAC 180 Query 181 GAAATCCAACAAGTTCT-CA-A-GATGACTACGAAGACGCCTCAAGATTCGAGTAAAGTG 237 |||||||||||| |||| || | ||| |||| |||||||||||||||| ||||||||||| Sbjct 181 GAAATCCAACAACTTCTACAGATGATTACTAAGAAGACGCCTCAAGATCCGAGTAAAGTG 240 Query 238 TCGCCACATATTCGCGACGAGCTTGACATGGTGTTTGTTGT-GGAGGAAGTTGGACACTC 296 ||| |||||||||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct 241 TCGTCACATATTCGCGACGATCTTGACATGGTGTTTGT-GTTGGAGGAAGTTGGACACTC 299 Query 297 GTGCGACTTATGCCAGAGAGATCTCGC-AACGGATCCAGAACGGCCTAATGCTCCCTTGC 355 ||||||||| |||||||||||||| || || |||||||||||||||||||||| ||||| Sbjct 300 GTGCGACTTGTGCCAGAGAGATCTTGCTAA-GGATCCAGAACGGCCTAATGCTTCCTTGA 358 Query 356 GCGGCTTACAAGAGGCGTCCGTGCTGTCTTGTGGTCATGTCTATCACTTCAAGTGCTTGA 415 | |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| Sbjct 359 GTGGCTTACAAGAGGCGTGCGTGCTGTCTTGTGGTCATGTCTACCACTTCAAGTGTTTGA 418 Query 416 AAGGAACCACTCTTGATATCGATAACCATTCTAATGATCCTTCCTGCATTTTCTGCATTA 475 |||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct 419 GAGGAACCACTCTTGATATTGATAACCATTCTAAAGATCCTTCTTGCATTTTCTGCATTA 478 Query 476 GCT 478 ||| Sbjct 479 GCT 481 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23308644208 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5