BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg358384
Length=4206
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61790.1 | Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:2482710... 2575 0.0
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 2148 0.0
AT5G61810.1 | Symbols: | Mitochondrial substrate carrier famil... 2021 0.0
AT5G07340.2 | Symbols: | Calreticulin family protein | chr5:23... 1459 0.0
AT5G07320.1 | Symbols: | Mitochondrial substrate carrier famil... 1140 0.0
> AT5G61790.1 | Symbols: CNX1, ATCNX1 | calnexin 1 | chr5:24827102-24829791
REVERSE LENGTH=2034
Length=2034
Score = 2575 bits (1394), Expect = 0.0
Identities = 1470/1507 (98%), Gaps = 3/1507 (0%)
Strand=Plus/Plus
Query 2703 GGTTCTTTATGAGTCTTTCGATGAGCCTTTTGATGGTCGCTGGATCGTTTCGAAGAATAG 2762
|||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 236 GGTTCTGTATGAATCGTTCGATGAGCCTTTTGATGGCCGCTGGATCGTTTCGAAGAATAG 295
Query 2763 TGATTACGAAGGTGTATGGAAGCATGCAAAGAGTGAAGGACATGAAGATTATGGACTTCT 2822
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 296 TGATTACGAAGGTGTATGGAAGCATGCAAAGAGTGAAGGACATGAGGATTATGGACTTCT 355
Query 2823 CGTGAGTGAGAAGGCTAGAAAGTATGGGATTGTGAAAGAGCTTGACGAGCCTCTAAACCT 2882
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 356 CGTGAGTGAGAAGGCTAGGAAGTATGGAATTGTGAAAGAGCTTGACGAGCCTCTAAACCT 415
Query 2883 CAAGGAGGGAACTGTTGTTCTTCAGTACGAGGTTCGTTTCCAGGAAGGACTTGAGTGTGG 2942
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CAAGGAAGGAACTGTTGTTCTTCAGTACGAGGTTCGTTTCCAGGAAGGACTTGAGTGTGG 475
Query 2943 AGGTGCTTACTTGAAGTACCTCCGTCCTCAAGAAGCTGGATGGACACCTCAGGGATTCGA 3002
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 476 TGGTGCTTACTTGAAGTACCTCCGTCCTCAGGAAGCTGGATGGACACCTCAGGGATTCGA 535
Query 3003 TAGTGAATCCCCTTACTCTATCATGTTTGGGCCTGACAAGTGTGGAGCTACAAACAAAGT 3062
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 536 TAGTGAATCCCCTTACTCTATCATGTTTGGGCCTGACAAGTGTGGAGGTACGAACAAAGT 595
Query 3063 GCATTTCATCTTAAAGCACAAGAATCCCAAGAGTGGCGAGTACGTTGAACACCATCTGAA 3122
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 GCATTTCATCTTGAAGCACAAGAATCCCAAGAGTGGCGAGTACGTTGAACACCATCTGAA 655
Query 3123 GTTCCCTCCCTCTGTTCCTTATGACAAGCTTTCCCATGTCTACACCGCCATCTTGAAACC 3182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 GTTCCCTCCCTCTGTTCCTTATGACAAGCTTTCCCATGTCTACACCGCCATCTTGAAACC 715
Query 3183 CGACAACGAGGTTAGGATTTTGGTTGATGGAGAGGAGAAGAAAAAGGCCAATTTACTCTC 3242
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 CGACAACGAGGTTAGAATTTTGGTTGATGGAGAGGAGAAGAAAAAGGCCAATTTACTCTC 775
Query 3243 TGGTGAAGACTTTGAGCCTGCATTGATCCCTGCCAAGACCATCCCTGACCCTGAAGACAA 3302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TGGTGAAGACTTTGAGCCTGCATTGATCCCTGCCAAGACCATCCCTGACCCTGAAGACAA 835
Query 3303 GAAACCAGAAGACTGGGACGAAAGAGCCAAGATTCCCGATCCAAATGCCGTGAAACCTGA 3362
||||||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 836 GAAACCAGAGGATTGGGACGAAAGAGCCAAGATTCCTGATCCAAATGCCGTGAAGCCTGA 895
Query 3363 TGACTGGGATGAGGATGCACCCATGGAGATCGAAGATGAGGAAGCTGAGAAACCCGAAGG 3422
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 896 GGACTGGGATGAGGATGCACCTATGGAGATTGAAGATGAGGAAGCTGAGAAACCCGAAGG 955
Query 3423 ATGGTTAGATGATGAGCCTGAGGAGGTCGATGACCCCGAAGCGACCAAGCCTGAAGATTG 3482
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 956 ATGGTTAGATGATGAGCCTGAGGAGGTCGACGACCCCGAAGCGACCAAGCCTGAAGATTG 1015
Query 3483 GGATGATGAGGAAGATGGTATGTGGGAGGCTCCTAAGATTGACAACCCCAAATGTGAAGC 3542
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1016 GGATGATGAGGAAGATGGTATGTGGGAGGCTCCTAAAATTGACAACCCCAAGTGTGAAGC 1075
Query 3543 AGCACCAGGTTGTGGTGAATGGAAGAGACCAATGAAGAGGAATCCTGCTTACAAGGGAAA 3602
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1076 AGCACCTGGTTGTGGTGAATGGAAGAGACCAATGAAGAGGAATCCTGCTTACAAGGGCAA 1135
Query 3603 ATGGAGTTCACCTCTTATTGATAACCCGGCTTACAAGGGAATCTGGAAACCCAAAGATAT 3662
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1136 ATGGAGCTCACCTCTTATTGATAACCCGGCTTACAAGGGAATCTGGAAACCCAGAGATAT 1195
Query 3663 TCCTAACCCTGACTACTTTGAGCTAGACAGACCCGATTACGAACCCATTGCAGCCATCGG 3722
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 CCCTAACCCTGACTACTTTGAGCTAGACAGACCCGATTACGAACCCATTGCAGCCATCGG 1255
Query 3723 TATTGAGATCTGGACAATGCAAGATGGTATCTTGTTTGACAACATCTTGATAGCGAAGGA 3782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1256 TATTGAGATCTGGACAATGCAAGATGGTATCTTGTTTGACAACATCTTGATAGCGAAAGA 1315
Query 3783 CGAGAAGGTCGCTGAGACTTACAGACAGACCACTTGGAAGCCCAAATTCGATGTTGAGAA 3842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 CGAGAAGGTCGCTGAGACTTACAGACAGACCACTTGGAAGCCCAAATTCGATGTTGAGAA 1375
Query 3843 AGAGAAACAAAAGGCAGAAGAGGAAGCTGCTGGCTCTGCAGATGGTCTCAAGAGCTACCA 3902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 AGAGAAACAAAAGGCAGAAGAGGAAGCTGCTGGCTCTGCAGATGGTCTCAAGAGCTACCA 1435
Query 3903 GAAGGTTGTTTTCGACCTCTTGAACAAGGTTGCAGATTTATCTTTCCTAAGTGCCTACAA 3962
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 GAAGGTTGTATTCGACCTCTTGAACAAGGTTGCAGATTTATCTTTCCTAAGTGCCTACAA 1495
Query 3963 GTCTAAGATCACGGAACTGATTGAGAAAGCTGAGCAACAACCAAACTTAACCATTGGTGT 4022
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1496 GTCTAAGATCACGGAACTGATTGAGAAAGCCGAGCAACAACCAAACTTAACCATTGGTGT 1555
Query 4023 CCTCGTCTCCATTGTGGTTGTATTCTTCTCGCTCTTCCTCAAGCTTATCTTTGGTGGCAA 4082
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 CCTCGTCGCCATTGTGGTTGTATTCTTCTCGCTCTTCCTCAAGCTTATCTTTGGTGGCAA 1615
Query 4083 AAAGGCGGC---ACCTGTGGAAAAGAAGAAACCAGAAGTAGCAGAGAGTTCAAAGAGTGG 4139
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1616 AAAGGCGGCGGCACCTGTGGAAAAGAAGAAACCAGAAGTAGCGGAGAGTTCAAAGAGTGG 1675
Query 4140 GGATGAGGCGGAGAAGAAGGAAGAAACCGCGGCACCACGCAAAAGGCAACCGAGACGTGA 4199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 GGATGAGGCGGAGAAGAAGGAAGAAACCGCGGCACCACGCAAAAGGCAACCGAGACGTGA 1735
Query 4200 TAATTAG 4206
|||||||
Sbjct 1736 TAATTAG 1742
> AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:24829987-24831553 REVERSE LENGTH=1567
Length=1567
Score = 2148 bits (1163), Expect = 0.0
Identities = 1356/1450 (94%), Gaps = 10/1450 (1%)
Strand=Plus/Plus
Query 1258 AGTTGTTCATATCTCTTGAAGCTGTGTAGAACCCTTAAGCATCTGCATCAATTTCACGCC 1317
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct 16 AGTTGTTCATATCTCTTGAAGCTGTGTAGAACCCTTAAACATCTGCATCAGTTTCATGCC 75
Query 1318 CAATTCATCACTT-CGGGACGAATCTCCAGTAG-TCTCAACCAGAACTCTGTTTTCGCCA 1375
||||||||||||| ||| | ||||||| | | | | |||| || ||||||||||||||||
Sbjct 76 CAATTCATCACTTCCGGCA-GAATCTCTAAT-GATTTCAAACAAAACTCTGTTTTCGCCA 133
Query 1376 ATGTCCTCTTCGCCATCACCTCTATTTCACCGTCCGCGTCGACGTCGAATGTGGTCGTGA 1435
|||||||||||||||||||||||||||||||||| |||||| ||||||| | ||||||||
Sbjct 134 ATGTCCTCTTCGCCATCACCTCTATTTCACCGTCTGCGTCGGCGTCGAAGGAGGTCGTGA 193
Query 1436 GCTACGCGACTTCGGTTTTCAGATTCTTCACAAACCCATCAACGTTTTGCTTCAATACGA 1495
||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||
Sbjct 194 GCTACGCGACTTCAGTTTTCAGATTCATCACAAACCCTTCAACGTTTTGTTTCAATACGA 253
Query 1496 TCATTAGGATTTATACGCTTCATGAGCCGTTGTCTCTCTCTTCTCAACGTTTCTTCGTGG 1555
|||||||||||| ||||||||||||||||| |||||| |||||| ||||||||||||| |
Sbjct 254 TCATTAGGATTTGTACGCTTCATGAGCCGTCGTCTCTGTCTTCTAAACGTTTCTTCGTCG 313
Query 1556 AGATGCGACGTCGCTCTGTTCCTCCCGATTTCCACACTTACCCTTTCGTATTCAAGGCTT 1615
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 314 AGATGCGACGTCGCTCTGTTCCTCCAGATTTCCACACTTTCCCTTTCGTATTCAAGGCTT 373
Query 1616 GTGCAGCAAAGAAGAATGGTGATCTTTCATTAGTCAAGACTCTGCATTGTCAAGCTTTGA 1675
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 374 GTGCAGCAAAGAAGAATGGTGATCTTACATTAGTCAAGACTCTGCATTGTCAAGCTTTGA 433
Query 1676 GATTCGGATTGTTATCTGATTTGTTCACTCTCAACACTCTGATTCGGGCTTACTCATTGA 1735
||||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||
Sbjct 434 GATTCGGATTGTTATCTGATTTGTTCACTTTGAACACTCTGATTCGTGTTTACTCATTGA 493
Query 1736 TGGCCCCAATCGGTAGTGCCTTGCAGCTGTTCGACGAAAATCCTCAAAGAGATGTTGTTA 1795
| || ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 494 TTGCTCCAATCGATAGTGCCTTGCAACTGTTCGACGAAAATCCTCAAAGAGATGTTGTTA 553
Query 1796 CCTACAATGTGTTGATCGACGGGTTAGTGAAGGCATGTGAGATTGTTCGTGCAAGAGAGT 1855
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 554 CCTACAATGTGTTGATCGACGGGTTAGTGAAGGCACGTGAGATTGTTCGTGCAAGAGAGT 613
Query 1856 TATTCGATTCAATGCCCTTTCGCGATTTGGTTTCTTGGAATAGTCTCATTGCTGGGTATG 1915
| || |||||||||||||| || ||||||||||| ||||||||||||||| |||| ||||
Sbjct 614 TGTTTGATTCAATGCCCTTACGTGATTTGGTTTCGTGGAATAGTCTCATTTCTGGTTATG 673
Query 1916 CACAGATGAATCAGTGCAGAGAAGCAATCAGTCTCTTCGACGAAATGATTGGTTTGGG-C 1974
| ||||||||||| |||||||||||||||| ||||||||||| ||| ||| |||||| |
Sbjct 674 CGCAGATGAATCATTGCAGAGAAGCAATCAAACTCTTCGACGAGATGGTTGCTTTGGGTC 733
Query 1975 TTAAAACCTGATAACGTCGCCATTGTTTCAACTCTTTCAGCTTGTGCACAATCAGGGGAT 2034
| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 734 T-AAAACCCGATAATGTCGCCATTGTTTCAACTCTTTCAGCTTGTGCACAATCAGGGGAT 792
Query 2035 TTGG-AAAAAGGGAAAGCTATTCATGATTACACGAAAAAGAAGAGACTTTTCATTGATTC 2093
| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 793 T-GGCAAAAAGGGAAAGCTATTCATGATTACACGAAAAGGAAGAGACTTTTCATTGATTC 851
Query 2094 GTTCTTAGCTACTGGATTGGTGGATTTCTATGCAAAATGTGGCTTCATCGACACAGCGAT 2153
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 852 CTTCTTAGCTACTGGATTGGTGGATTTCTATGCAAAATGTGGTTTCATCGATACAGCGAT 911
Query 2154 GGAGATCTTCCACTTATGTTCAGATAAAACTTTATTCACATGGAATGCAATGATCACTGG 2213
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 912 GGAGATCTTCGAATTATGTTCAGATAAAACTTTATTCACATGGAATGCAATGATCACTGG 971
Query 2214 TCTTGCAATGCACGGTAACGGCGAGCTAACGGTTGATTACTTTCGTAAGATGGTTAGTTC 2273
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 972 TCTTGCAATGCACGGTAACGGTGAGCTAACGGTTGATTACTTCCGTAAGATGGTTAGTTC 1031
Query 2274 TGGAATCAAACCAGACGGAGTTAGCTTCATAAGTGTTTTAGTGGGCTGCAGCCATTCTGG 2333
||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||
Sbjct 1032 TGGAATCAAACCAGACGGAGTAACCTTCATAAGTGTTTTAGTGGGTTGCAGCCATTCTGG 1091
Query 2334 TCTAGTTGATGAAGCCAGAAAGCTTTTCGACCAGATGAGATCTTTGTATGATGTTGATAG 2393
|||||||||||||||||| || ||||| ||||| ||||||||||||||||||||| ||||
Sbjct 1092 TCTAGTTGATGAAGCCAGGAACCTTTTTGACCAAATGAGATCTTTGTATGATGTTAATAG 1151
Query 2394 AGAGATGAAACATTACGGGTGTATGGCGGATTTGCTTGGAAGAGCAGGGTTGATCGAAGA 2453
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1152 AGAGATGAAGCATTACGGGTGTATGGCGGATTTGCTTGGAAGAGCAGGATTGATCGAAGA 1211
Query 2454 AGCAGCGGAAATGATCGAGCAAATGCCTAAAGATGGAGGAAAAAGAGAGAAACTATTAGC 2513
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1212 AGCAGCGGAAATGATCGAGCAAATGCCTAAAGATGGAGGAAACAGAGAGAAACTCTTAGC 1271
Query 2514 ATGGAGTGGTTTGTTAGGAGGATGTAGAATCCACGGGAACATAGA-AGTCGCAGAGAAAG 2572
|||||| ||||||||||| ||||| |||||||||||||||||||| | |||| |||||||
Sbjct 1272 ATGGAGCGGTTTGTTAGGCGGATGCAGAATCCACGGGAACATAGAGA-TCGCGGAGAAAG 1330
Query 2573 CTGCAAAGCGAGTCAAGGCGTTGAGTCCCGAGGATGGAGGAGTGTATAAAGTTATGGTGG 2632
| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1331 CCGCAAATCGAGTCAAGGCGTTGAGTCCCGAAGATGGAGGAGTGTATAAAGTTATGGTGG 1390
Query 2633 AAATGTATGCAAATGCAGAAAGATGGGAGGATGTAGTTAAGGTTAGAGAAATGATCGAAA 2692
||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || || |
Sbjct 1391 AAATGTATGCAAACGCAGAGAGATGGGAGGAAGTAGTTAAGGTTAGAGAAATAATAGACA 1450
Query 2693 GGGACAAGAA 2702
| ||||||||
Sbjct 1451 GAGACAAGAA 1460
> AT5G61810.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr5:24831619-24833902 REVERSE LENGTH=1828
Length=1828
Score = 2021 bits (1094), Expect = 0.0
Identities = 1206/1261 (96%), Gaps = 4/1261 (0%)
Strand=Plus/Plus
Query 1 ATGGAGGCAGAGAAATCCAAGAAAAATCCGGTTAAGAAGCCCGTAGAGGCAACAATGGAG 60
||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||
Sbjct 168 ATGGAGGCAGAGAAATCCAAGCAAAATCCGGGTAAGAAGCCCGTAGAAGCAACAATGGAG 227
Query 61 CATGTGTTGGTGGCATTACGAGAGACCAAGGAGGAGAGGGAGACCAGAATTCGAAAACTG 120
|| |||||||||||||||||||||||||||||| |||| |||| ||| |||| |||||||
Sbjct 228 CACGTGTTGGTGGCATTACGAGAGACCAAGGAGAAGAGAGAGATCAGGATTCAAAAACTG 287
Query 121 TTCGAATTCTTCGACAATTCGAAGTTAGGGTTCTTAGACGATACCCAGATCGAGAAAGGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 TTCGAATTCTTCGACAATTCGAAGTTAGGGTTCTTAGACGATACCCAGATCGAGAAAGGT 347
Query 181 TTGTCTTCGCTTAGTATTCCTCAAAATTATAGGTACGCTAGTGATTTTCTTAAAGTCTGC 240
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 348 TTGTCTTCGCTTAGTATTCCTCCAAAGTATAGGTACGCTAGTGATTTTCTTAAAGTCTGC 407
Query 241 GACGCGAATCGAGATGGGCGTGTGGATTACCAGGAGTTTCGTCGTTACATGGACT-CTAA 299
||| |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct 408 GACTCGAATCGAGATGGGCGTGTGGACTACCAGGAGTTTCGTCGTTACATGGA-TGCTAA 466
Query 300 GGAGCTTGAGCTCTACAAGATCTTCCAGGCCATTGATGTCGAACACAATGGCGACATTTG 359
||||||||| | |||||||| || |||||||||||| | ||||||||||||||||||||
Sbjct 467 AGAGCTTGAGTTGTACAAGATTTTTCAGGCCATTGATATTGAACACAATGGCGACATTTG 526
Query 360 TCCAGAAGAGCTTTGGGAGGCTCTTGATAAAGCTGGCATTAAAATTAAAGATGAGGAACT 419
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 527 TCCAGCGGAGCTTTGGGAGGCTCTTGATAAAGCTGGCATTAAAATCAAAGATGAGGAACT 586
Query 420 CGCTTCTTTTATGGAGCATGTTGATAAGGACAACAACGGAATTATAACTTTTGAAGAGTG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 587 TGCTTCTTTTATGGAGCATGTTGATAAGGACAACAACGGAATTATAACTTTTGAGGAGTG 646
Query 480 GAGGGATTTTCTTTTGCTTAACCCTCATGAAGCCACAATTGAAAACATTTATCATCACTG 539
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 647 GAGGGATTTTCTTTTGCTAAACCCTCATGAAGCTACAATTGAGAACATTTATCATCACTG 706
Query 540 GGAAAGAGTATGCTTAATTGACATTGGGGAACAAGCTGTTATACCAGACGGTATAAGTAC 599
|||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||| |
Sbjct 707 GGAAAGAGTATGCTTAATAGACATTGGAGAGCAAGCTGTTATACCAGATGGTATAAGTGC 766
Query 600 ACACGCTCAAAGAAGCAAATTACTTCTCGCTGGAGGAATAGCAGGAGCTGTTTCTAGAAC 659
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 767 ACACGCTCAAAGAAGCAAATTACTTCTCGCGGGAGGAATAGCAGGGGCTGTTTCTAGAAC 826
Query 660 CGCGACTGCGCCTCTGGACCGTCTGAAAGTTGCTTTGCAAGTTCAACGTACAAATTTGGG 719
||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 827 CGCAACTGCGCCTCTGGACCGTCTGAAAGTTGCTCTGCAAGTTCAACGGACAAATTTGGG 886
Query 720 CGTTGTCCCGACCATTAAGAAAATATGGAGAGAAGATAAGTTGTTGGGTTTCTTCAGAGG 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TGTTGTCCCGACCATTAAGAAAATATGGAGAGAAGATAAGTTGTTGGGTTTCTTCAGAGG 946
Query 780 TAATGGGTTAAATGTAACGAAAGTCGCTCCTGAAAGCGCCATAAAGTTTGCTGCTTATGA 839
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 947 TAATGGGTTAAATGTAGCGAAAGTCGCTCCTGAAAGCGCTATAAAGTTTGCTGCTTATGA 1006
Query 840 AATGCTTAAATCC-ATAATTGGGGGAGTGGATGGTGACATTGGTACAAGCGGGAGGCTTT 898
|||||| ||| || ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1007 AATGCTGAAA-CCAATAATTGGGGGAGCGGATGGTGACATTGGTACAAGCGGGAGGCTTT 1065
Query 899 TGGCTGGTGGATTGGCTGGTGCAGTGGCTCAAACAGCTATTTATCCTATGGATCTCGTGA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 TGGCTGGTGGATTGGCTGGTGCAGTGGCTCAAACAGCTATTTATCCTATGGATCTCGTGA 1125
Query 959 AGACTCGGTTACAGACTTTTGTGAGTGAAGTTGGGACACCAAAGCTGTGGAAACTCACGA 1018
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1126 AGACTCGGTTACAGACTTTTGTGAGTGAAGTTGGGACACCAAAGCTGTGGAAACTCACAA 1185
Query 1019 AGGATATTTGGATTCAAGAAGGACCCCGAGCTTTTTACAGGGGTCTTTGTCCTTCTCTTA 1078
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1186 AGGATATTTGGATTCAAGAAGGACCCCGAGCTTTTTACAGGGGTCTTTGTCCTTCTCTAA 1245
Query 1079 TTGGGATTATACCTTACGCAGGAATTGACCTTGCTGCTTACGAAACTCTTAAAGACTTAT 1138
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1246 TTGGGATTATCCCTTACGCAGGAATTGACCTTGCTGCTTACGAAACTCTTAAAGACTTAT 1305
Query 1139 CAAGGTCACATTTTCTTCATGACACTGCCGAGCCAGGTCCTCTCATACAACTGGGATGTG 1198
||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct 1306 CAAGGGCACATTTTCTTCATGACACTGCGGAGCCAGGTCCTTTGATACAACTGGGATGTG 1365
Query 1199 GAATGACGTCTGGAGCTCTTGGAGCATCGTGTGTTTACCCATTACAGGTCATAAGAACAA 1258
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366 GAATGACTTCTGGAGCTCTTGGAGCATCGTGTGTTTACCCATTACAGGTCATAAGAACAA 1425
Query 1259 G 1259
|
Sbjct 1426 G 1426
> AT5G07340.2 | Symbols: | Calreticulin family protein | chr5:2317213-2319649
FORWARD LENGTH=1901
Length=1901
Score = 1459 bits (790), Expect = 0.0
Identities = 1222/1428 (86%), Gaps = 39/1428 (3%)
Strand=Plus/Plus
Query 2710 TATGAGTC-TTTCGATGAGCCTTTTGATGGTCGCTGGATCGTTTCGA-AGAATAG-TGAT 2766
||||| || ||| || ||||||||||||||||||||| ||||||| | |||| || |||
Sbjct 205 TATGAATCGTTT-GACGAGCCTTTTGATGGTCGCTGGGTCGTTTC-AGAGAA-AGCTGAA 261
Query 2767 TACGAAGGTGTATGGAAGCATGCA-AAGAGTGAAGGACATGAAGATTATGGACTTCTCGT 2825
||| ||||||| |||||||| | | ||||||||||| ||||| |||||||||||||| ||
Sbjct 262 TACCAAGGTGTGTGGAAGCACG-AGAAGAGTGAAGGGCATGATGATTATGGACTTCTAGT 320
Query 2826 GAGTGAGAAGGCT-AGAAAGTATGGGATTGTGAAAGAGC------TTGACGAGCCTCTAA 2878
||||||||| ||| || ||||| || || || ||||||| |||| ||||||||||
Sbjct 321 GAGTGAGAAAGCTAAG-AAGTACGGAATAGTTAAAGAGCTTGATGTTGATGAGCCTCTAA 379
Query 2879 ACCTCAAGGAGGGAACTGTTGTTCTTCAGTACGAGGTTCGTTTCCAGGAAGGACTTGAGT 2938
|||| || || ||||||||||||||||| ||||||| ||||||||| ||||| |||||||
Sbjct 380 ACCTTAACGAAGGAACTGTTGTTCTTCAATACGAGGCTCGTTTCCAAGAAGGGCTTGAGT 439
Query 2939 GTGGAGGTGCTTACTTGAAGTACCTCCGTCCTCAAGAAGCTGGATGGACACCTC-AGGGA 2997
|||| ||||||||||| ||||| || ||||||||||||||||||||| |||| ||||
Sbjct 440 GTGGTGGTGCTTACTTAAAGTATCTTCGTCCTCAAGAAGCTGGATGGGTTCCTCAAGGG- 498
Query 2998 TTCGATAGTGAATCCCCTTACTCTATCATGTTTGGGCCTGACAAGTGTGGAGCTACAAAC 3057
|| |||| ||| || |||||||||||||||||||| ||||| |||||||| ||||| |||
Sbjct 499 TTTGATAATGATTCTCCTTACTCTATCATGTTTGGACCTGATAAGTGTGGTGCTACCAAC 558
Query 3058 AAAGTGCATTTCATCTTAAAGCACAAGAATCCCAAGAGTGGCGAGTACGTTGAACACCAT 3117
|| || ||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||
Sbjct 559 AAGGTTCATTTCATCTTGAAGCATAAGAATCCCAAGAGTGGCGAGTTTGTTGAGCACCAT 618
Query 3118 CTGAAGTTCCCTCCCTCTGTTCC-TTATGACAAGCTTTCCCATGTCTACACCGCCATCTT 3176
|| ||||||||||| |||||||| || ||||| |||||| ||||||||||| || ||||
Sbjct 619 CTCAAGTTCCCTCCTTCTGTTCCGTT-TGACATGCTTTCTCATGTCTACACTGCGGTCTT 677
Query 3177 GAAACCCGACAACGAGGTTAGGATTTTGGTTGATGGAGAGGAGAAGAAAAAGGCCAATTT 3236
|||| | || || ||||| ||||||||||| ||||| ||||||||||| |||| |||||
Sbjct 678 GAAATCTGATAATGAGGTGAGGATTTTGGTCGATGGTGAGGAGAAGAAGAAGGGTAATTT 737
Query 3237 ACTCTCTGGTGAAGACTTTGAGCCTGCATTGATCCCTGCCAAGACCATCCCTGACCCTGA 3296
||| |||| |||||||||||||||| | ||||| ||| |||||||||||||||| || ||
Sbjct 738 ACTGTCTGCTGAAGACTTTGAGCCTCCGTTGATTCCTTCCAAGACCATCCCTGATCCAGA 797
Query 3297 AGACAAGAAACCAGAAGACTGGGACGAAAGAGCCAAGATTCCCGATCCAAATGCCGTGAA 3356
|||||||| |||||||||||||| || |||||||||||||| ||||| ||||| |||||
Sbjct 798 GGACAAGAAGCCAGAAGACTGGGATGAGAGAGCCAAGATTCCTGATCCTAATGCTGTGAA 857
Query 3357 ACCTGATGACTGGGATGAGGATGCACCCATGGAGATCGAAGATGAGGAAGCTGAGAAACC 3416
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 858 GCCTGATGACTGGGATGAGGATGCACCCATGGAGATTGAAGATGAGGAAGCTGAGAAACC 917
Query 3417 CGAAGGATGGTTAGATGATGAGCCTG-AGGAGGTCGATGACCCCGAAGCGACCAAGCCTG 3475
|||||||||||| ||||||||||||| || |||| || |||||||| || | |||||| |
Sbjct 918 CGAAGGATGGTTGGATGATGAGCCTGTAG-AGGTTGAAGACCCCGAGGCAAGCAAGCCAG 976
Query 3476 AAGATTGGGATGATGAGGAAGATGGT-ATGTGGGAGGCTCCTAAGATTGACAACCCCAAA 3534
||||||||||||| |||||||||||| | |||||||||||||||| || |||| ||||
Sbjct 977 AAGATTGGGATGACGAGGAAGATGGTGA-GTGGGAGGCTCCTAAGGTTTCCAACACCAAG 1035
Query 3535 TGTGAAGCAGCACCAGGTTGTGGTGAATGGAAGAGACCAATGAAGAGGAATCCTGCTTAC 3594
||||| |||||||| || ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 1036 TGTGAGGCAGCACCCGGATGTGGCGAATGGAAGAGACCGATGAAGAGGAACCCTGCTTAC 1095
Query 3595 AAGGGAAAATGGAGTTCACCTCTTATTGATAACCCGGCTTACAAGGGAATCTGGAAACCC 3654
||||| |||||||| |||||||| || |||||||| |||||||||||||||||||||||
Sbjct 1096 AAGGGCAAATGGAGCTCACCTCTCATAGATAACCCAGCTTACAAGGGAATCTGGAAACC- 1154
Query 3655 AA-AGATATTCCTAACCCTGACTACTTTGAGCTAGACAGACCCGA-TTACGAACCCATTG 3712
|| ||| ||||| || ||||| || |||||||| || || || || || || |||||||
Sbjct 1155 AAGAGACATTCCAAATCCTGATTATTTTGAGCTTGAGAGGCC-GAATTTGGAGCCCATTG 1213
Query 3713 CAGCCATCGGTATTGAGATCTGGACAATGCAAGATGGTATCTTGTTTGACAACATCTTGA 3772
| ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct 1214 CTGCCATTGGTATTGAGATATGGACAATGCAAGACGGTATCTTATTTGACAACATCTTGA 1273
Query 3773 TAGCGAAGGACGAGAAGGTCGCTGAGACTTACAGACAGACCACTTGGAAGCCCAAATTCG 3832
|| | || ||||||||||| ||||| ||||||||||| | ||||||||||||||| || |
Sbjct 1274 TATCTAAAGACGAGAAGGTTGCTGAAACTTACAGACAAAGCACTTGGAAGCCCAAGTTTG 1333
Query 3833 ATGTTGAGAAAGAGAAACAAAAGGCAGAAGAGGAAGCTGCTGGCTCTG-CAGATGGTCTC 3891
|||| ||||||||||||||||||||||| || ||||||||||| | | |||||||||||
Sbjct 1334 ATGTGGAGAAAGAGAAACAAAAGGCAGAGGATGAAGCTGCTGG-TGAGGCAGATGGTCTC 1392
Query 3892 AAGAGCTACCAGAAGGTTGTTTTCGACCTCTTGAACAAGGTTGCAGAT-TTATCTTTCCT 3950
||||| ||||||||| || |||||||||||| ||||||||||||| || ||||||||
Sbjct 1393 AAGAGTTACCAGAAGAAGGTGTTCGACCTCTTGTACAAGGTTGCAGACATT-TCTTTCCT 1451
Query 3951 AAGTGCCTACAAGTCTAAGATCACGGAACTGATTGAGAAAGCTGAGCAACA-A-CCAAAC 4008
||||| |||||||| ||||| | |||||| |||||||||||||| |||| | ||||||
Sbjct 1452 TAGTGCGTACAAGTCAAAGATTATGGAACTTATTGAGAAAGCTGA--AACACAGCCAAAC 1509
Query 4009 TTAACCATTGGTGTCCTCGTCTCCATTGTGGTTGTATTCTTCTCGCTCTTCCTCAAGCTT 4068
|||||||| ||||| ||| | ||||| ||| | || ||| |||| |||||| |||||||
Sbjct 1510 TTAACCATCGGTGTGCTCATTTCCATCGTGATCGTCTTCCTCTCTCTCTTCTTCAAGCTC 1569
Query 4069 ATCTTTGGTGGCAAAAAGGCGGCACCTGTGGAAAAGAAGAAACCAGAA 4116
|| |||||||| |||||| | || |||||||||||||| |||
Sbjct 1570 ATATTTGGTGGTGCAAAGGCTA-AG--GTAGAAAAGAAGAAACCGGAA 1614
> AT5G07320.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr5:2309911-2312287 FORWARD LENGTH=1982
Length=1982
Score = 1140 bits (617), Expect = 0.0
Identities = 1029/1225 (84%), Gaps = 40/1225 (3%)
Strand=Plus/Plus
Query 55 ATGGAGCATGTGT-TGGTGGCATTACGAGAGACCAA-GGAGGAGAGGGAGACCAGAATTC 112
||||||||||| | | |||| ||||| |||| ||| ||| ||||| |||| ||| ||||
Sbjct 395 ATGGAGCATGT-TCTATTGGCGTTACGTGAGA-CAATGGATGAGAGAGAGATCAGGATTC 452
Query 113 GAAAACTGTTCGAATTCTTCGACAATTCGAAGTTAGGGTTCTTAGACGATACCCAGATCG 172
| | |||| || ||||| || |||||||| |||||||||||||| || |||||||||
Sbjct 453 GTAGTTTGTTTGATTTCTTTGATAATTCGAATTTAGGGTTCTTAGATTATGCCCAGATCG 512
Query 173 AGAAA-GGT-TTGTCTTCGCTT-AGTATTCCTCAAAATTATAGGTACGCTAGTGATTT-T 228
| ||| ||| ||| |||||||| || ||||||| | || | ||||||||| ||||| |
Sbjct 513 A-AAAGGGTCTTG-CTTCGCTTCAG-ATTCCTCCTGAGTACAAGTACGCTAGAGATTTGT 569
Query 229 CTTAAAGTCTGCGACGCGAATCGAGATGGGCGTGTGGATTACCAGGAGTTTCGTCGTTAC 288
||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct 570 -TTAGAGTCTGCGACGCTAATCGAGATGGGCGTGTTGATTACCAGGAGTTTCGTCGATAC 628
Query 289 ATGGACT-CTAAGGAGCTTGAGCTCTACAAGATCTTCCAGGCCATTGATGTCGAACACAA 347
|| || | |||||||||||||||| |||| ||| ||||| ||||||||||| || || ||
Sbjct 629 ATTGA-TGCTAAGGAGCTTGAGCTATACAGGATTTTCCAAGCCATTGATGTTGAGCATAA 687
Query 348 TGGC-GACA-TTTGTCCAGAAGAGCTTTGGGAGGCTCTTGATAAAGCTGGCATTAAAATT 405
|||| | || |||| || || ||||||||||||||||||| ||| || |||||| | ||
Sbjct 688 TGGCTG-CATTTTG-CCTGAGGAGCTTTGGGAGGCTCTTGTTAAGGCCGGCATTGAGATC 745
Query 406 AAAGATGAGGAACTCGCTTC-TTTTATGGAGCATGTTGATAAGGACAACAACGGAATTAT 464
| |||||||||||||| || |||| ||||||||||||||||||||||||| |||| |||
Sbjct 746 GATGATGAGGAACTCGC-TCGTTTTGTGGAGCATGTTGATAAGGACAACAATGGAACTAT 804
Query 465 AACTTTTGAAGAGTGGAGGGATTTTCTTTTGCTTA-ACCCTCATGAAGCCACAATTGAAA 523
||| |||||||||||||| |||||||||||| ||| | |||||||||||||| ||||||
Sbjct 805 AACGTTTGAAGAGTGGAGAGATTTTCTTTTG-TTATATCCTCATGAAGCCACCCTTGAAA 863
Query 524 ACATTTATCATCACTGGGAAAGAGTATGCTTAATTGACATTGGGGAACAAGCTGTTATAC 583
|||| |||||||| |||||||| || ||||| || || |||||||| |||||||||||||
Sbjct 864 ACATATATCATCATTGGGAAAGGGTGTGCTTGATAGATATTGGGGAGCAAGCTGTTATAC 923
Query 584 CAGACGGTATAAGTACACACGCT-CAAAGAAGCAAATTACTTCTCGCTGGAGGAATAGCA 642
| || |||||||||| ||| | | ||||||||| ||||||||||||||||||| ||||
Sbjct 924 CGGATGGTATAAGTAAACATG-TGAAAAGAAGCAGATTACTTCTCGCTGGAGGACTAGCC 982
Query 643 GGAGCTGTTTCTAGAACCGCGACTGCGCCTCTGGACCGTCTGAAAGTTGCTTTGCAAGTT 702
||||||||||||||||| || ||||||||||| || |||||||| |||| ||||||||||
Sbjct 983 GGAGCTGTTTCTAGAACTGCAACTGCGCCTCTTGATCGTCTGAAGGTTGTTTTGCAAGTT 1042
Query 703 CAACGTACAAAT-TTGGGCGTTGTCCCGACCATTAAGAAAATATGGAGAGAAGATAAGTT 761
||| | || || ||| || ||||||| |||||||| ||||||||||||||||||||
Sbjct 1043 CAAAGGGCACATGCAGGG-GTCCTCCCGACAATTAAGAAGATATGGAGAGAAGATAAGTT 1101
Query 762 GTTGGGTTTCTTCAGAGGTAATGGGTTAAATGTAACGAAAGTCGCTCCTGAAAGCGCCAT 821
| |||||||||| |||||||||||||||||||| | ||| || ||||||||||| |||||
Sbjct 1102 GATGGGTTTCTTTAGAGGTAATGGGTTAAATGTCATGAAGGTTGCTCCTGAAAGTGCCAT 1161
Query 822 AAAG-TTTGCTGCTTATGAAATGCTTAAATCCATAATTGG-GGGAGTGGATGGTGACATT 879
||| |||| |||||| |||||||| ||| |||| ||||| ||| | ||||||||| |||
Sbjct 1162 TAAGTTTTG-TGCTTACGAAATGCTAAAACCCATGATTGGAGGG-GAGGATGGTGATATT 1219
Query 880 GGTACAAGCGGGAGGCTTTTGGCTGGTGGATTGGCTGGTGCAGTGGCTCAAACAGCTATT 939
|||||||| ||||| ||| |||| |||||| ||||||||||| |||||||||| ||||||
Sbjct 1220 GGTACAAGTGGGAGACTTATGGCAGGTGGAATGGCTGGTGCATTGGCTCAAACCGCTATT 1279
Query 940 TATCCTATGGATCTCGTGAAGACTCGGTTACAGACTTTTGTGAGTGAAGTTGGGA---CA 996
|| |||||||||||||||||||||||||||||||||| ||| ||||||| ||| | ||
Sbjct 1280 TACCCTATGGATCTCGTGAAGACTCGGTTACAGACTTGTGTCAGTGAAGGTGGAAAGGCA 1339
Query 997 CCAAAGCTGTGGAAACTCACGAAGGATATTTGGATTCAAGAAGGACCCCGAGCTTTTTAC 1056
|| ||| ||||||| || || || ||||| ||| ||| || ||||| || ||||| |||
Sbjct 1340 CCTAAGTTGTGGAAGCTTACAAAAGATATATGGGTTCGGGAGGGACCTCGGGCTTTCTAC 1399
Query 1057 AGGGGTCT-TTGTCCTTCTCTTATTGGGATTATACCTTACGCAGGAATTGACCTTGCTGC 1115
| |||||| || |||||||||| |||||||| | ||||| |||||||||||||| |||||
Sbjct 1400 AAGGGTCTGTT-TCCTTCTCTTCTTGGGATTGTTCCTTATGCAGGAATTGACCTCGCTGC 1458
Query 1116 TTACGAAACTCTTAAAGACTTATCAAGGTCACATTTTCTTCATGACACTGCCGAGCCAGG 1175
|| ||||| || |||||||| || || || || ||||||| ||||||| |||| ||
Sbjct 1459 ATATGAAACGCTAAAAGACTTGTCCAGAACATATATTCTTCAGGACACTG---AGCCGGG 1515
Query 1176 TCCTCTCATACAACTGGGATGTGGAATGACGTCTGGAGCTCTTGGAGCATCGTGTGTTTA 1235
|||||| ||||| ||| | ||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 1516 TCCTCTGATACAGCTGAGCTGTGGAATGACATCAGGAGCCCTTGGAGCATCATGTGTTTA 1575
Query 1236 CCCATTACAGGTCA-TAAGAACAAG 1259
||| |||||||| | ||||||||||
Sbjct 1576 CCCGTTACAGGT-AGTAAGAACAAG 1599
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 209647654797
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5