BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg358759

Length=747
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G65600.1 | Symbols:  | Concanavalin A-like lectin protein ki...   287    1e-76
  AT5G65610.1 | Symbols:  | unknown protein; Has 1807 Blast hits ...   187    1e-46


> AT5G65600.1 | Symbols:  | Concanavalin A-like lectin protein 
kinase family protein | chr5:26216126-26218153 REVERSE LENGTH=2028
Length=2028

 Score =  287 bits (155),  Expect = 1e-76
 Identities = 171/179 (96%), Gaps = 0/179 (0%)
 Strand=Plus/Plus

Query  297  TATATGGAGTCATAGAACTGGTAAGGCTTCAAATTTCAACACCAGTTTCTCTTTCAAAAT  356
            |||||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||
Sbjct  258  TATATGGAGTCATAAAACTGGTAAGGCTTCAGATTTCAGCACCAGTTTCTCCTTCAAAAT  317

Query  357  CGATGCTCGTAACCTTTCAGCAGATGGTCATGGAATCTGTTTCTTTCTTGTTCCTATGGG  416
            |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  318  CGATGCTCGTAATCTTTCAGCAGATGGTCATGGAATCTGTTTCTTTCTTGCTCCTATGGG  377

Query  417  AGCTCAACTCCCTGCATACTCAGTTGGTGGTTTCTTGAATTTGTTCACTCGAAAGAATA  475
            ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  378  AGCTCAACTACCTGCATACTCAGTTGGTGGTTTCTTGAATTTGTTCACTCGGAAGAATA  436


> AT5G65610.1 | Symbols:  | unknown protein; Has 1807 Blast hits 
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; 
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other 
Eukaryotes - 339 (source: NCBI BLink). | chr5:26219258-26221028 
FORWARD LENGTH=753
Length=753

 Score =  187 bits (101),  Expect = 1e-46
 Identities = 125/136 (92%), Gaps = 3/136 (2%)
 Strand=Plus/Minus

Query  1    ATGGAGAGAGATCTTGCCGACAACCGTAGACAATCATACTCCACCGGTCGATGCTTGAGT  60
            ||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  710  ATGGATAGAGTTCTCGCCGACAACCGTAGACAATCGTACTCCACCGGTCGATGCTTGAGT  651

Query  61   TCGCCGTTATCTTGTTTCATCCATACAGAA-A--CAGAGTACGCTCGAATCAGTAACCAC  117
            ||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||
Sbjct  650  TCGCCGTTATCTTGTCTCATCCATACAGAAGAAACAGAGTACGCTCGAATCAGTAACCAC  591

Query  118  GGCAAGAAGACAAGAC  133
              ||| ||||||||||
Sbjct  590  AACAACAAGACAAGAC  575



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 36269054134


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5