BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg358769
Length=2745
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65687.1 | Symbols: | Major facilitator superfamily protein... 2466 0.0
AT5G65685.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1570 0.0
> AT5G65687.1 | Symbols: | Major facilitator superfamily protein
| chr5:26269856-26272899 REVERSE LENGTH=1773
Length=1773
Score = 2466 bits (1335), Expect = 0.0
Identities = 1451/1508 (96%), Gaps = 4/1508 (0%)
Strand=Plus/Plus
Query 1242 ATTGAATCTGACAGCG--A-A-AGAGATAATGACGAAAGTTGGCCAGAGAGATTCTCCGG 1297
|||||||||||||||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct 84 ATTGAATCTGACAGCGAAAGACAGAGATAATGACGAGAGTTGGCCAGAGAGATTCTCCGG 143
Query 1298 CTAAAGAAGAAGCTCCGCCGGCGACTAAAAAACGATTTTTGACTCCGGGAAGATTCGTTA 1357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 144 CTAAAGAAGAAGCTCCGCCGGCGACTAAAAAACGATTTTTGACTCCGGGAAGATTCGTGA 203
Query 1358 CAATCCTGTGTATCATTAACTTGATAAATTACGTTGATCGAGGAGTGATCGCGAGTAATG 1417
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 CAATCTTGTGTATCATTAACTTGATAAATTACGTTGATCGAGGAGTGATCGCGAGTAATG 263
Query 1418 GTGTTAATGGAAGCTCAAAAACATGCGATGCCAAAGGGGTTTGCTCTGCAGGAACTGGAA 1477
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 264 GTGTTAATGGAAGCTCAAAAGTATGTGATGCCAAAGGGGTTTGCTCTGCAGGAACTGGAA 323
Query 1478 TTCAGGGAGAGTTTAAATTAACTAACTTTGAAGATGGTCTTTTGTCATCTGCGTTTATGG 1537
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 324 TTCAGGGAGAGTTTAACTTAACTAACTTTGAAGATGGTCTTTTGTCATCTGCGTTTATGG 383
Query 1538 TTGGACTTCTTGTGGCATCTCCAATATTTGCTGGATTGTCCAAAAGAATCAATCCTTTTA 1597
|||||||||||||||| ||||||||||| ||||||||||| |||||| |||| |||||||
Sbjct 384 TTGGACTTCTTGTGGCTTCTCCAATATTCGCTGGATTGTCAAAAAGATTCAACCCTTTTA 443
Query 1598 AACTAATTGGTGTTGGATTAACCGTTTGGACTATCGCTGCTCTTGGTTGCGGGTTTTCCT 1657
||||||| |||||||||||||| ||||||||||| |||| | | ||||||||||||||||
Sbjct 444 AACTAATCGGTGTTGGATTAACTGTTTGGACTATTGCTGTTATCGGTTGCGGGTTTTCCT 503
Query 1658 ACAACTTCTGGATGATTGCTGTTTTCCGAATGTTTGTTGGGGTTGGTGAGGCTTCCTTTA 1717
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 504 ACAACTTCTGGATGATTGCTGTTTTCAGAATGTTTGTTGGGGTTGGTGAGGCTTCCTTTA 563
Query 1718 TTAGTCTTGCAGCACCATATATCGATGATAGTGCTCCTGTTGCAAGGAAAAATTTCTGGC 1777
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 TTAGTCTTGCAGCACCTTATATCGATGATAGTGCTCCTGTTGCAAGGAAAAATTTCTGGC 623
Query 1778 TTGGACTGTTCTACATGTGTATACCAGCAGGAGTTGCTCTAGGCTATGTGTTTGGTGGAT 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 TTGGACTGTTCTACATGTGTATACCAGCAGGAGTTGCTCTAGGCTATGTGTTTGGTGGAT 683
Query 1838 TCATTGGAAACCATTTAGGATGGCGTTGGGCGTTTTACATAGAGGCAATTGCAATGGCTG 1897
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 684 ACATTGGAAACCATTTAGGATGGCGTTGGGCGTTTTACATAGAGGCAATCGCAATGGCTG 743
Query 1898 TCTTCGTCGTTTTGTCCTTCTGTATCAAACCACCGCAGCAGCTAAAAGGTTTTGCTGATA 1957
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 744 TCTTCGTCATTTTGTCCTTCTGTATCAAACCACCGCAGCAGCTAAAAGGTTTTGCTGATA 803
Query 1958 AAGATTCGAAGAAATCCTCTACATCTATTGAAACGGTCGCTCCTACAGATGCAGAAGCTT 2017
| ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 804 AGGATTCTAAGAAACCCTCTACATCTATTGAAACGGTTGCTCCTACAGATGCAGAAGCTT 863
Query 2018 CACAAATTAAAACCAAAACCCCCAAATCCAAGAACCTGGTTGTCCTATTTGGAAAAGACT 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 864 CACAAATTAAAACCAAAACCCCCAAATCCAAGAACCTGGTTGTCCTATTTGGAAAAGACT 923
Query 2078 TAAAGGCTCTTTTCAGCGAGAAAGTATTTATAGTAAACGTTCTAGGTTACATCACCTACA 2137
||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 924 TAAAGGCTCTTTTCAGCGAGAAAGTATTTATTGTAAATGTTCTTGGTTACATCACCTACA 983
Query 2138 ACTTTGTGATCGGAGCTTACTCATATTGGGGACCAAAAGCCGGTTTTGGTATCTACAAAA 2197
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 ACTTTGTGATTGGAGCTTACTCATATTGGGGACCAAAAGCCGGTTTTGGTATCTACAAAA 1043
Query 2198 TGAAAAATGCAGACATGATTTTTGGAGGACTTACAATCATCTGCGGAATAATTGGAACAT 2257
||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1044 TGAAAAACGCGGACATGATTTTTGGAGGACTTACAATCATATGCGGAATAATTGGAACAT 1103
Query 2258 TAGGTGGAAGCTATGTGCTTGATCGCATAAACGCCACTCTTTCAAACACGTTCAAGTTAC 2317
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1104 TAGGTGGAAGCTATGTGCTTGATCGCATAAACGCTACTCTTTCAAACACCTTCAAGTTAC 1163
Query 2318 TAGCTGCATCAACTTTACTCGGCGCAGCGTTTTGTTTCACTGCTTTCTTAATGAAGAATA 2377
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1164 TAGCTGCATCAACTTTACTCGGCGCAGCGTTTTGTTTCACTGCTTTCTTGATGAAGAATA 1223
Query 2378 TGTATGCCTTCATTGGTTTATTCGCAGTGGGAGAAATTCTAATCTTTGCACCACAGGCTC 2437
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 TGTATGCCTTCATCGCTTTATTCGCAGTGGGAGAAATTCTAATCTTTGCACCACAGGCTC 1283
Query 2438 CAGTTAACTTTGTTTGTCTCCATTGCGTTAGACCAAACTTGAGACCATTATCAATGGCTT 2497
| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1284 CGGTTAACTTTGTGTGTCTCCATTGCGTGAGACCAAACTTGAGACCATTGTCAATGGCTT 1343
Query 2498 CTTCAACTGTTTTGATCCATATCTTAGGCGATGTTCCTTCTTCTCCACTTTATGGGAAAA 2557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 CTTCAACTGTTTTGATCCATATCTTAGGCGATGTTCCTTCTTCTCCACTTTATGGGAAAA 1403
Query 2558 TGCAGGATCATCTAAAAAATTGGAGAACATCAACTCTTATCATTACTTCAATCCTCTTCG 2617
||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 1404 TGCAGGATCATTTAAAAAATTGGAGAAAATCAACACTTATCATTACTTCAATCCTCTTCC 1463
Query 2618 TCGCAGCTATTATATGGGGAATTGGTATATTTATGAATAGTGTGGATCGGTCTAATGAAG 2677
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1464 TCGCAGCTATTATATGGGGAATTGGGATATTTATGAATAGTGTGGATAGGTCTAATGAAG 1523
Query 2678 TAAGTGAAGATGATGAGGTCGAAGAAGAGAAATTGGAAAGCAAAGCAGAGAACTCTACTC 2737
|||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 1524 TAAGTGAAGACGATGAGGTCGAAGAAGATAAATTGGAAAGCAAAACAGAGAACTCTACTC 1583
Query 2738 TCGTCTAA 2745
||| ||||
Sbjct 1584 TCGCCTAA 1591
> AT5G65685.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr5:26273132-26275919 REVERSE LENGTH=1558
Length=1558
Score = 1570 bits (850), Expect = 0.0
Identities = 980/1043 (94%), Gaps = 8/1043 (1%)
Strand=Plus/Plus
Query 1 ATGCAAGCAACGGCGAATCTTCCGGCGATATGGAACCTATCGCTGT-GCGGGTCATCCTC 59
|||||||||||||||||||||||| |||||||||| || ||||| | | |||||||||||
Sbjct 56 ATGCAAGCAACGGCGAATCTTCCGACGATATGGAATCTGTCGCT-TCGTGGGTCATCCTC 114
Query 60 TAAAGTCCATATAGTGAACCCTAGGCATCGAAAGTCTCACGCGCTTCATTGTTTGAGATC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 115 TAAAGTCCATATAGTGAACCCTAGGCATCGAAAGTCTCACGCGCTTCATTGTTTGAGATC 174
Query 120 AGAAGGGCATGAAGAGTTTGATAATTCTCAGGATAA-TCTTGGACTATCTTCTATTACAA 178
||||||||||||||||||||| |||||||| || || |||||||| ||||||||||||||
Sbjct 175 AGAAGGGCATGAAGAGTTTGACAATTCTCA-GAAAAGTCTTGGACAATCTTCTATTACAA 233
Query 179 AAGAAGCAAAACATAAGGACATATGGAACCTCTTTAGAGAAGCTCaaaaaaaTATCCTTA 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 234 AAGAAGCAAAACATAAGGACATATGGAACCTCTTTAGAGAAGCTCAAAAAAATATAATGA 293
Query 239 TTTTAAACAAGCAACGCCTAGCTGCAGTTGAGGAGTTAGAGA-AGTTAAAGAATGAGAAA 297
| |||||||| |||||||||||||||||||| |||||||| | || ||||||| || |||
Sbjct 294 TCTTAAACAAACAACGCCTAGCTGCAGTTGACGAGTTAGA-ACAGCTAAAGAAAGATAAA 352
Query 298 GATGAATTGCTAGAGAGGATAAACCAATTGGAGGCAGAAAGTCAGATTGTAATCAAGAAA 357
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 353 GAGGAATTGTTAGAGAGGATAAACCAATTGGAGGCAGAAAGTCAGATTGTAATCAAGAAA 412
Query 358 GATAAGTCGTCTCTATTCTGGGAGTTACTTCTCCGTATTGATTCTATGGTGATCAATGGA 417
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 413 GATAAGTCGTCTCTATTCTGGGAGTTGCTTCTCCGTATTGATTCTATGGTTATCAATGGA 472
Query 418 TTAATCAACATTGAAGAAGCTTCATCCTTGAGAAAACTGGTTAAGGAGCATGAAGCAAAC 477
|| | ||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||
Sbjct 473 CTAGTTAACATTGAAGAAGCTTCATCCATGAGAAAGCTGGTTAAAGAGCATGAAGCGAAC 532
Query 478 ATCTCTG-AGTTTCCCCTCGATGTCCTGCAACAAGGAGATGCTGATATTCTAGCAGAACT 536
||||||| | ||||| || ||||||||||||||||||||||| || ||||||||||||||
Sbjct 533 ATCTCTGTA-TTTCCTCTTGATGTCCTGCAACAAGGAGATGCCGAAATTCTAGCAGAACT 591
Query 537 CAGACTGTTCACAAATAAAGGCAAAAGGAATGGTCTCCATGTGATTCATATTTGCACCGA 596
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 TAGACGGTTCACAAATAAAGGCAAAAGGAATGGTCTCCATGTGATTCATATTTGCACCGA 651
Query 597 AATGGCTCCATTGGTTTCTGTTGGACCTTTGGCTTCTTATATAACAGGATTGTCGTCTGC 656
|||||||||||| |||||||||||||||||||| || ||||||||||||||||| | |||
Sbjct 652 AATGGCTCCATTAGTTTCTGTTGGACCTTTGGCCTCATATATAACAGGATTGTCTTGTGC 711
Query 657 ACTCCAAGGAGAGGGCTACATGGTCGAAGTTATATTGCCAAAATATTCGACACTTGATTT 716
|||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 712 ACTCCAAGAAGAGGGTTACATGGTTGAAGTTATATTGCCAAAATATTCTACACTTGATTT 771
Query 717 GGATGAAATTGAAGGGCTCCGGGAAATTGAAGCTGATGCATATTCGTATTTCAATGGTCA 776
||| |||||||||||||| || ||||| ||||| ||||||||||| ||||| |||| ||
Sbjct 772 GGACGAAATTGAAGGGCTTCGTGAAATCGAAGCCGATGCATATTCTTATTTTGATGGCCA 831
Query 777 GCTGCATGCAAACCGAATATGGAATGGAGTTGTCTCTGGAATAGGAGTGACACTTATTCA 836
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 832 GCTGCATGCAAACCGAATATGGAACGGAGTTGTCTCTGGAATAGGAGTGACACTTATTCA 891
Query 837 ACCAGTGTATTACTCCTCAATGTTTAGCCGTGATAAAGTATACGGGTATCAGGACGATTT 896
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 ACCAGTGTATTACTCGTCAATGTTTAGCCGTGATAAAGTATACGGGTATCAGGACGATTT 951
Query 897 TGATAGATTTGCCTACTTCTCTCGTGCTTCATTGGATTACATTGCAAAATCTGGAAAGCA 956
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 TGATAGATTTGCATACTTCTCTCGTGCTTCATTGGATTACATTGCAAAATCTGGAAAGCA 1011
Query 957 GCCTGATGTTTTACACATTCACAACTGGCAAACTGCAATAGTTGGACCGTTGTTTTGGGA 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 GCCTGATGTTTTACACATTCACAACTGGCAAACTGCAATAGTTGGACCGTTGTTTTGGGA 1071
Query 1017 TGTTTTTGTTAATCAGGGTCTTG 1039
|||||||||||||||||| ||||
Sbjct 1072 TGTTTTTGTTAATCAGGGACTTG 1094
Score = 335 bits (181), Expect = 2e-90
Identities = 196/203 (97%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 1031 AGGGTCTTGTACCTCCTGAAAAATTGGAGCTATGTGGGCTCGATCCAGCTGAGCTTCACC 1090
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1134 AGGGTCTTGTACCTCCTGAAAAATTGGAGCTATGTGGGCTCGATCCAGCTGAACTTCACC 1193
Query 1091 GTCTTGATCGCTTACAAGATAACA-ATAATCCACATTTTGTTAACATTTTGAAGGGCGGT 1149
|||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct 1194 GTCTTGATCGCTTACAAGATAACACA-AATCCACATTTTGTTAATATTTTGAAGGGCGGT 1252
Query 1150 GTTGTCTACTCCAATAAAGTCGTAATATTGTCATCCTCACATAGCTCAATCCCTGGTCTC 1209
|||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1253 GTTGTCTACTCCAACAAAGTTGTAATAATGTCATCCTCACATAGCTCAATCCCTGGTCTC 1312
Query 1210 GAACCAACTTTAGCTATCCACAA 1232
|||||||||||||||||||||||
Sbjct 1313 GAACCAACTTTAGCTATCCACAA 1335
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136353751074
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5