BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg358814
Length=1167
Score E
Sequences producing significant alignments: (Bits) Value
AT5G67430.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) sup... 1755 0.0
> AT5G67430.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily
protein | chr5:26910315-26912103 FORWARD LENGTH=1522
Length=1522
Score = 1755 bits (950), Expect = 0.0
Identities = 1096/1167 (94%), Gaps = 8/1167 (1%)
Strand=Plus/Plus
Query 1 ATGGGGAAAGGATTCAAAGTAGTTGTGGTGAGAGAGTATGATCCAAAGAGAGACTTGACG 60
|||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 115 ATGGGGAAAGGATTTAACGTAGTTGTGGTGAGAGAGTATGATCCAAAGAGAGACTTAACG 174
Query 61 AGTGTGAAAGAGCTCGAGGAAAGTTGTGAAGTCGGATCTTTATTAGTGGATCTCATGGGT 120
|||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 175 AGTGTGGAAGAGCTTGAGGAAAGCTGTGAAGTCGGATCTTTATTAGTGGATCTCATGGGT 234
Query 121 GACCCGCTTGCCCGGATCCGACAATCTCCTTCTTTCCACATGCTGGTGGCAGAGATCGGT 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 GACCCTCTTGCCCGGATCCGACAATCTCCTTCTTTCCACATGCTGGTGGCAGAGATCGGT 294
Query 181 AACGAGATAGTTGGGATGATCAGAGGAACGATCAAGATGGTGACACGTGGTGGAAATGCA 240
|| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 295 AATGAGATAGTCGGGATGATCAGAGGAACGATCAAAATGGTGACACGTGGTGTAAATGCA 354
Query 241 TTACGTCAAGCAGGCGGCGTTTTGCCGGAAATAAGCACCACCAAACTTGCCTTCGTCTCC 300
||||||||||| | || ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 355 TTACGTCAAGCCGACGACGTTTCGCCGGAAATAAACACCACCAAACTTGCCTTCGTCTCC 414
Query 301 GGCCTTAGAGTCTCTCCGTTTTACAGGAGGATGGGAATTGGACTGAAATTGGTGCAAAGA 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 415 GGCCTTAGAGTCTCTCCGTTTTACAGGAGGATGGGAATTGGACTGAAACTGGTGCAAAGA 474
Query 361 CTCGAAGAGTGGTTTCTACGAAACGGCGCCGTTTATTCTTACGTGCAAACCGAAAACGAC 420
|| |||||||||||||||||||||| ||||||||| || ||||||||||| |||||||||
Sbjct 475 CTTGAAGAGTGGTTTCTACGAAACGACGCCGTTTACTCCTACGTGCAAACTGAAAACGAC 534
Query 421 AACACAGCTTCGGTCAAACTCTTCACCGAGAAAAGTGGTTACTCCAAATTCCGTACACCA 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 AACATAGCTTCGGTCAAACTCTTCACCGAGAAAAGTGGTTACTCCAAATTCCGTACACCA 594
Query 481 ACTTTCCTGGTCAACCCGGTCTTCAACCACCGAGTCACCGTCTCTCGCCGAGTCAAAATC 540
|||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 595 ACTTTCTTGGTCAACCCGGTCTTCAACCACCGAGTCACTGTCTCTCGACGAGTCAAAATC 654
Query 541 ATCAAACTCACTCCCTACGACGCCGAGTCACTCTACCGCAGCCGATTCTCCTTCACCGAG 600
||||||||| |||||| |||||| |||||||||||||||| ||||||||| |||||||
Sbjct 655 ATCAAACTCGCTCCCTCCGACGCTGAGTCACTCTACCGCAACCGATTCTCAACCACCGAG 714
Query 601 TTTTTCCCTTCAGACATCAACTCAATCCTCACAAACAAACTCTCCCTCGGCACTTATTTG 660
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 715 TTTTTCCCTTCGGACATCAACTCAATCCTCACCAACAAACTCTCCCTCGGCACTTATCTG 774
Query 661 GCCGTGCCACGTGGCGAAGACCATGTTTCCGGTTCCTTACCCGACCAGACCGGGTCATGG 720
|| ||||||||||| | |||| | |||||||| || ||||||||||||||||||||||||
Sbjct 775 GCTGTGCCACGTGGAGGAGACAACGTTTCCGGGTCGTTACCCGACCAGACCGGGTCATGG 834
Query 721 GCCGTTATAAGTATCTGGAACAGTAAAGATGTGTATAGACTACAAGTCAAAGGAGCGTCG 780
|||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct 835 GCCGTTATAAGTATTTGGAACAGTAAAGATGTTTACAGACTTCAAGTCAAAGGAGCGTCG 894
Query 781 CGTCTTAAACGCACATTAGCAAAGAT-AACGCGCGTTTTCGACGGAGCGTTTCCGTTTTT 839
||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct 895 CGTCTTAAACGCATGTTAGCTAAG-TCAACGCGCGTTTTCGACGGAGCGTTTCCGTTTTT 953
Query 840 GAAAATCCCGTCGTTTCCTAATCTTTTCAAGTCGTTCGCGATGCATTTCATGTACGGTAT 899
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 954 GAAAATCCCGTCGTTTCCCAATCTTTTCAAGTCGTTCGCGATGCATTTTATGTACGGTAT 1013
Query 900 CGGCGGCGAAGGGCCACGAGCGGCGGAGATGGTGGAGGCGCTTTGCTCACACGCGCATAA 959
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1014 CGGTGGCGAAGGGCCACGAGCGGCGGAGATGGTGGAGGCGCTTTGCTCACACGCACATAA 1073
Query 960 CTTAGCTAGAAAAAGCGGTTGCGCCGTCGTGGCTGCTGAGGTGGCGAGCTGTGAGCCGCT 1019
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1074 CTTAGCTAGAAAAAGCGGTTGTGCCGTCGTGGCTGCTGAGGTGGCGAGCTGTGAGCCGCT 1133
Query 1020 TAGTGTTGGGATTCCTCATTGGAAAGTGCTCTCGCCTGAGGATTTGTGGTGTTTGAAACG 1079
|| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1134 CAGAGTTGGGATTCCACATTGGAAGGTGCTCTCGCCGGAGGATTTGTGGTGTTTGAAACG 1193
Query 1080 TCTCCGAGACGACGGTGACGATGACGGCGTAGATTGGACTAAGTCACCACCTGGATTGTC 1139
||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1194 TCTCCGATA------TGACGATGACGGCGTAGACTGGACCAAGTCACCACCTGGATTGTC 1247
Query 1140 TATTTTCGTTGACCCTAGAGAAATATA 1166
|||||||||||||||||||||||||||
Sbjct 1248 TATTTTCGTTGACCCTAGAGAAATATA 1274
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57278821845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5