BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg358997

Length=546
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G41900.1 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   361    5e-99
  AT3G09110.1 | Symbols:  | Protein of unknown function (DUF674) ...   174    7e-43


> AT5G41900.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:16768953-16771696 FORWARD LENGTH=1624
Length=1624

 Score =  361 bits (195),  Expect = 5e-99
 Identities = 213/222 (96%), Gaps = 0/222 (0%)
 Strand=Plus/Plus

Query  322   GGAGCCAAGCTCGAGTCGTATCTCGACCATGTCCGTGACCACGTGGACTGCGACGTTGCC  381
             |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct  1253  GGAGCCAAGCTCGACTCGTATCTCGACCATGTCCGTGACCATGTGGACTGCGACGTCGCC  1312

Query  382   ATCTTCCACGGTGGCAAGAACGAGCTCATTCCTGTGGAGTGTAGCTACAGTGTCAAGAGC  441
             || ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||
Sbjct  1313  ATTTTCCACGGTGGCAAGGACGAGCTCATTCCTGTGGAGTGTAGTTACAGTGTGAAGAGC  1372

Query  442   AAAGTGCCACGTGCCACTGTCCACGTCATCCCTGACAAAGACCACATCACCTTTGTGGTC  501
             ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct  1373  AAAGTGCCACGTGCCACTGTCCACGTCATCCCTGACAAAGACCACATCACCATTGTCGTC  1432

Query  502   GGCCGACAAAAAGACTTTGCACGAGAGCTTGAGCTCATTTGG  543
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct  1433  GGCCGACAAAAAGACTTTGCACGAGAGCTTGAGCTCATTTGG  1474


> AT3G09110.1 | Symbols:  | Protein of unknown function (DUF674) 
| chr3:2794165-2795991 REVERSE LENGTH=1666
Length=1666

 Score =  174 bits (94),  Expect = 7e-43
 Identities = 133/152 (88%), Gaps = 1/152 (1%)
 Strand=Plus/Plus

Query  120   TTCATCTTCAGATTCTGGGAATATTCGAATTGTGAAGCAAGAAACGAATTTCATAGTGTC  179
             |||| |||||| |||||  | |||| || ||||||||  |||||| ||||||||||||||
Sbjct  1176  TTCA-CTTCAGCTTCTGCTAGTATTGGACTTGTGAAGGGAGAAACAAATTTCATAGTGTC  1234

Query  180   AGATGATCTGGTTGTCACACCTATGAAGTCATCCTCAACAATTTCATTATTAAGCAAGTT  239
             |||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||| |
Sbjct  1235  AGATGATCTGGTTGTCACTCCTATGAACTCGTCCTCAACAATTTCATTGTTAAGCAAGCT  1294

Query  240   GCAAATGAATATCAGTGATATTGAGGAGCAAG  271
             ||| ||||| ||  ||||||||||||||||||
Sbjct  1295  GCAGATGAACATTGGTGATATTGAGGAGCAAG  1326



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 26171990587


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5