BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg359112

Length=525
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G23360.1 | Symbols: MENG | S-adenosyl-L-methionine-dependent...   230    1e-59


> AT1G23360.1 | Symbols: MENG | S-adenosyl-L-methionine-dependent 
methyltransferases superfamily protein | chr1:8295185-8296919 
REVERSE LENGTH=1048
Length=1048

 Score =  230 bits (124),  Expect = 1e-59
 Identities = 150/163 (92%), Gaps = 0/163 (0%)
 Strand=Plus/Plus

Query  176  GTTCAAGAGTATCCATACTTGATTTCAATAAGAGCAATCAATCTGTTACGACGTTTATGC  235
            ||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct  550  GTTCAAGAGTATCTATACTTGATTTCAATAAGAGCAACCAATCCGTTACTACGTTTATGC  609

Query  236  AGGATTGGATGATTGACAATGTAGTTGTCCCTGTAGTTACTATTTATGGTCTTGCAAAGG  295
            |||  ||||||||||||||||||||||||||||| | |||| |||||| |||||||||||
Sbjct  610  AGGGCTGGATGATTGACAATGTAGTTGTCCCTGTGGCTACTGTTTATGATCTTGCAAAGG  669

Query  296  AGTATGAATATCTGAAGTATTCAATCAATGGGTACCTAACAGG  338
            ||||||||||||| ||||||||||||||||| || ||||||||
Sbjct  670  AGTATGAATATCTCAAGTATTCAATCAATGGCTATCTAACAGG  712



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 25117073500


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5