BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg359273 Length=642 Score E Sequences producing significant alignments: (Bits) Value AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)... 209 2e-53 > AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:4348498-4350867 FORWARD LENGTH=1812 Length=1812 Score = 209 bits (113), Expect = 2e-53 Identities = 147/164 (90%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 212 GTGGGGAACGGAGATCTGTTAGGAGACAAGGTTTGATAGAATCGGCGAGGTTTCTGAGTT 271 ||||||||||||||||||| ||||||||||| |||| |||| | ||||||||||| ||| Sbjct 364 GTGGGGAACGGAGATCTGTCAGGAGACAAGGGTTGAGAGAAGCTGCGAGGTTTCTTAGTC 423 Query 272 GTGCAAGTAGCGGACGTGTGATGAGGGAGCCGTCTATGCTTGTGAGGGAGGCTGCGGCGG 331 |||| ||||||||||| |||||| | ||||| |||||||||||||| || || ||||||| Sbjct 424 GTGCTAGTAGCGGACGCGTGATGCGTGAGCCATCTATGCTTGTGAGAGAAGCCGCGGCGG 483 Query 332 AGCAGCTCGAGGAGAGGCAGAGCGATTGGGCTTATTTTAAGCCT 375 |||||||||||||||||||||||||||||||||||| |||||| Sbjct 484 AGCAGCTCGAGGAGAGGCAGAGCGATTGGGCTTATTCGAAGCCT 527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30994468699 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5