BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg359447
Length=642
Score E
Sequences producing significant alignments: (Bits) Value
AT3G23480.2 | Symbols: | Cyclopropane-fatty-acyl-phospholipid ... 582 1e-165
AT3G23530.1 | Symbols: | Cyclopropane-fatty-acyl-phospholipid ... 553 9e-157
AT3G23510.1 | Symbols: | Cyclopropane-fatty-acyl-phospholipid ... 547 4e-155
AT3G23470.1 | Symbols: | Cyclopropane-fatty-acyl-phospholipid ... 497 4e-140
AT3G23460.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 211 6e-54
> AT3G23480.2 | Symbols: | Cyclopropane-fatty-acyl-phospholipid
synthase | chr3:8418801-8422916 FORWARD LENGTH=1577
Length=1577
Score = 582 bits (315), Expect = 1e-165
Identities = 406/450 (90%), Gaps = 6/450 (1%)
Strand=Plus/Plus
Query 1 GCGAGGATAGAGAAGAACC--ATGAGGTTTTAGATATTGGATGCGGATGGGGAACTTTGG 58
||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||| |
Sbjct 651 GCGAGGATAAAGAAGAACCATATGAGGTTTTAGAGATAGGATGCGGATGGGGAACTTTAG 710
Query 59 CCATAGAAGCTGTGAGAAGAACTGGATGCAAATATACTGG-TATTACGCTATCTATTGAA 117
||||||||| ||||| |||||||||||||||||| ||||| | |||| ||||||||||||
Sbjct 711 CCATAGAAGTTGTGAAAAGAACTGGATGCAAATACACTGGCT-TTACTCTATCTATTGAA 769
Query 118 CAACTTAAGTATGCAGAAGAAAAAGTAAAACAAACTGGACTTCAGGACCGGATTACGTTT 177
|||||||| |||| |||||| ||||| ||| || ||||||||||||| ||||||||||||
Sbjct 770 CAACTTAAATATGTAGAAGAGAAAGTTAAAGAAGCTGGACTTCAGGAGCGGATTACGTTT 829
Query 178 AAGCTCTGCGATTATCGCCAACTATCTGATGCTCAAAAATATGACAGAATTATATCTTGC 237
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 830 AAGCTCTGCGATTATCGCCAACTATGTGATACTCAAAAATATGACAGAATTATATCTTGT 889
Query 238 GAGATGCTAGAACATGTTGGCCACAAATTCATGGAGACATTTTTCAGTCACTGTGAAGCT 297
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 GAGATGATAGAACATGTTGGCCACAAATTCATGGAGACATTTTTCAGTCACTGTGAAGCT 949
Query 298 GCGCTTGCGGAAGACGGCATTTTTGTCTTGCAGTTTATATCGATACCCGAAGAACGTTAC 357
|||||||| |||||||||||||||||| | ||||| | | | ||||| || || | ||||
Sbjct 950 GCGCTTGCAGAAGACGGCATTTTTGTCCTCCAGTTCACAGCAATACCTGAGGAGCTTTAC 1009
Query 358 AATGAGTA-CAGACTAAATTCAGATTTCATAAAAGAATACATATTCCCAGGTGGATGCCT 416
| ||| | |||||||| ||||| |||||||| |||||||||||||| |||||||| ||
Sbjct 1010 GACGAG-AGCAGACTAACTTCAGGTTTCATAACGGAATACATATTCCCTGGTGGATGTCT 1068
Query 417 TCCTTCTTTAGCCAGAGTTACTTCAGCCAT 446
||||||||||||||||||||||||||||||
Sbjct 1069 TCCTTCTTTAGCCAGAGTTACTTCAGCCAT 1098
> AT3G23530.1 | Symbols: | Cyclopropane-fatty-acyl-phospholipid
synthase | chr3:8436671-8442846 FORWARD LENGTH=3177
Length=3177
Score = 553 bits (299), Expect = 9e-157
Identities = 399/448 (89%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 1 GCGAGGATAGAGAAGAACCATGAGGTTTTAGATATTGGATGCGGATGGGGAACTTTGGCC 60
||||| ||||||||| |||| ||||||||||| || ||||| ||||||||||||||||||
Sbjct 2194 GCGAGAATAGAGAAGGACCACGAGGTTTTAGAGATAGGATGTGGATGGGGAACTTTGGCC 2253
Query 61 ATAGAAGCTGTGAGAAGAACTGGATGCAAATATACTGGTATTACGCTATCTATTGAACAA 120
||||||| |||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct 2254 ATAGAAGTTGTGAGAAGAACTGGATGCAAATACACCGGGATTACGCTATCTATTGAACAG 2313
Query 121 CTTAAGTATGCAGAAGAAAAAGTAAAACAAACTGGACTTCAGGACCGGATTACGTTTAAG 180
||||| ||||| ||||||||||| ||| || |||||||||||||| ||||||| ||| ||
Sbjct 2314 CTTAAATATGCTGAAGAAAAAGTGAAAGAAGCTGGACTTCAGGACTGGATTACTTTTGAG 2373
Query 181 CTCTGCGATTATCGCCAACTATCTGATGCTCAAAAATATGACAGAATTATATCTTGCGAG 240
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2374 CTCCGCGATTATCGCCAACTATCTGATGCTCAGAAATATGACAGAATTATATCTTGCGAG 2433
Query 241 ATGCTAGAA-CATGTTGGCCACAAATTCATGGAGACATTTTTCAGTC-ACTGTGAAGCTG 298
||||||||| | || || || | |||||||||| |||||||||| | |||||||| |
Sbjct 2434 ATGCTAGAAGCG-GTCGGACATGAGTTCATGGAGATGTTTTTCAGTCGA-TGTGAAGCCG 2491
Query 299 CGCTTGCGGAAGACGGCATTTTTGTCTTGCAGTTTATATCGATACCCGAAGAACGTTACA 358
| ||||| ||| | ||| | | ||||||||||| ||||||||||||||||| |||||||
Sbjct 2492 CACTTGCAGAAAATGGCCTAATAGTCTTGCAGTTCATATCGATACCCGAAGAGCGTTACA 2551
Query 359 ATGAGTACAGACTAAATTCAGATTTCATAAAAGAATACATATTCCCAGGTGGATGCCTTC 418
||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 2552 ATGAGTACAGACTAAGTTCAGATTTCATTAAAGAATACATATTCCCTGGTGGATGCCTTC 2611
Query 419 CTTCTTTAGCCAGAGTTACTTCAGCCAT 446
|||||||||||||||| ||| |||||||
Sbjct 2612 CTTCTTTAGCCAGAGTCACTACAGCCAT 2639
> AT3G23510.1 | Symbols: | Cyclopropane-fatty-acyl-phospholipid
synthase | chr3:8427660-8433314 FORWARD LENGTH=3062
Length=3062
Score = 547 bits (296), Expect = 4e-155
Identities = 398/448 (89%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 1 GCGAGGATAGAGAAGAACCATGAGGTTTTAGATATTGGATGCGGATGGGGAACTTTGGCC 60
||||| ||||||||| |||||||||||||||| || ||||| ||||||||||||||||||
Sbjct 2173 GCGAGAATAGAGAAGGACCATGAGGTTTTAGAGATAGGATGTGGATGGGGAACTTTGGCC 2232
Query 61 ATAGAAGCTGTGAGAAGAACTGGATGCAAATATACTGGTATTACGCTATCTATTGAACAA 120
||||||| |||||||||||||||||||||||| || || ||||||||||||||||| ||
Sbjct 2233 ATAGAAGTTGTGAGAAGAACTGGATGCAAATACACCGGCATTACGCTATCTATTGAGCAG 2292
Query 121 CTTAAGTATGCAGAAGAAAAAGTAAAACAAACTGGACTTCAGGACCGGATTACGTTTAAG 180
||||| ||||| ||||||||||| ||| || |||||||||||||||||||||| ||| ||
Sbjct 2293 CTTAAATATGCTGAAGAAAAAGTGAAAGAAGCTGGACTTCAGGACCGGATTACTTTTGAG 2352
Query 181 CTCTGCGATTATCGCCAACTATCTGATGCTCAAAAATATGACAGAATTATATCTTGCGAG 240
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2353 CTCCGCGATTATCGCCAACTATCTGATGCTCACAAATATGACAGAATTATATCTTGCGAG 2412
Query 241 ATGCTAGAA-CATGTTGGCCACAAATTCATGGAGACATTTTTCAGTC-ACTGTGAAGCTG 298
||||||||| | || || || | || ||||||| |||||||||| | |||||||| |
Sbjct 2413 ATGCTAGAAGCG-GTCGGACATGAGTTTATGGAGATGTTTTTCAGTCGA-TGTGAAGCCG 2470
Query 299 CGCTTGCGGAAGACGGCATTTTTGTCTTGCAGTTTATATCGATACCCGAAGAACGTTACA 358
| ||||| ||||||||| | | ||||||||||| ||||||| ||||||||| |||||||
Sbjct 2471 CACTTGCTGAAGACGGCCTAATGGTCTTGCAGTTCATATCGACACCCGAAGAGCGTTACA 2530
Query 359 ATGAGTACAGACTAAATTCAGATTTCATAAAAGAATACATATTCCCAGGTGGATGCCTTC 418
||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||| |||
Sbjct 2531 ATGAGTACAGACTAAGTTCAGATTTCATTAAAGAATACATATTCCCTGGTGCATGCGTTC 2590
Query 419 CTTCTTTAGCCAGAGTTACTTCAGCCAT 446
|||||||||||| ||| |||||||||||
Sbjct 2591 CTTCTTTAGCCAAAGTCACTTCAGCCAT 2618
> AT3G23470.1 | Symbols: | Cyclopropane-fatty-acyl-phospholipid
synthase | chr3:8414710-8418165 FORWARD LENGTH=1467
Length=1467
Score = 497 bits (269), Expect = 4e-140
Identities = 390/449 (87%), Gaps = 6/449 (1%)
Strand=Plus/Plus
Query 1 GCGAGGATAGAGAAGAACCATGAGGTTTTAGATATTGGATGCGGATGGGGAACTTTGGCC 60
|||||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||
Sbjct 682 GCGAGGATAGAGAAGAACCATGAGGTCTTAGAGATGGGATGCGGATGGGGAACTTTTGCC 741
Query 61 ATAGAAGCTGTGAGAAGAACTGGATGCAAATATACTGGTATTACGCTATCTATTGAACAA 120
||||||| ||||| |||||||||||||||||| ||||| ||||| || |||||||||||
Sbjct 742 ATAGAAGTTGTGAAAAGAACTGGATGCAAATACACTGGCATTACTCTTTCTATTGAACAG 801
Query 121 CTTAAGTATGCAGAAGAAAAAGTAAAACAAACTGGACTTCAGGACCGGATTACGTTTAAG 180
||||| |||||| ||| |||||| ||| || |||||||||||| ||||||||||||| |
Sbjct 802 CTTAAATATGCAAAAGCAAAAGTGAAAGAAGCTGGACTTCAGGGTCGGATTACGTTTATG 861
Query 181 CTCTGCGATTATCGCCAACTATCTGATGCTCAAAAATATGACAGAATTATATCTTGCGAG 240
||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||
Sbjct 862 CTCTGCGATTATCGCCAACTATCTGATGCTCGCAAATATGACAGAATTATAGCTTGTGAG 921
Query 241 ATGCTAGAA-CATGTTGGCCACAAATTCATGGAGACA-TTTTTCAGTCACTGTGAAGCTG 298
||| ||||| | ||||||||| | || ||||| | | ||||||||| ||||||| ||
Sbjct 922 ATGATAGAAGCG-GTTGGCCACGAGTTTATGGATA-AGTTTTTCAGTTGTTGTGAAGATG 979
Query 299 CGCTTGCGGAAGACGGCATTTTTGTCTTGCAGTTTATATCGATACCCGAAGAACGTTACA 358
||||||| ||| |||||||||||||| | ||||| | | |||||||||| | | ||||
Sbjct 980 CGCTTGCAGAAAACGGCATTTTTGTCCTACAGTTCACAGCGATACCCGAGGCTCTTTACG 1039
Query 359 ATGAGTA-CAGACTAAATTCAGATTTCATAAAAGAATACATATTCCCAGGTGGATGCCTT 417
| ||| | |||||||| ||||| |||||||| |||||||||||||| |||||||| |||
Sbjct 1040 ACGAG-AGCAGACTAACTTCAGGTTTCATAACGGAATACATATTCCCTGGTGGATGTCTT 1098
Query 418 CCTTCTTTAGCCAGAGTTACTTCAGCCAT 446
|||||||||||||||||||||||||||||
Sbjct 1099 CCTTCTTTAGCCAGAGTTACTTCAGCCAT 1127
Score = 235 bits (127), Expect = 4e-61
Identities = 156/170 (92%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 447 ACAAATCATCGATCTTGGATTCGACGATAAATTCATTAGGATATGGGAATATTATTTCGA 506
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 1230 ACAAATCATCGATCTTGGATTCGACGATAAATTCATAAGGACATGGGAATATTATTTCGA 1289
Query 507 CTATTGTGCAGCTGGTTTCAAGACTCTTACCCTTGGA-GACTACCAGATATTTTTCTCAC 565
|||||||||||||||||||||||||||||||||| || | |||||||||| |||||||||
Sbjct 1290 CTATTGTGCAGCTGGTTTCAAGACTCTTACCCTTAGAAG-CTACCAGATAGTTTTCTCAC 1348
Query 566 GTCCAGGGAATGTAGTTGCATTCGGTGATGATGATCCGTCCCGCAGCTCC 615
| |||||||| || | ||| ||||||||||||||||| | |||||| |||
Sbjct 1349 GCCCAGGGAACGTCGCTGCGTTCGGTGATGATGATCCATTCCGCAGTTCC 1398
> AT3G23460.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr3:8412319-8414319
FORWARD LENGTH=918
Length=918
Score = 211 bits (114), Expect = 6e-54
Identities = 168/193 (87%), Gaps = 7/193 (4%)
Strand=Plus/Plus
Query 447 ACAAATCATC-GATCTTGGATTCGACGATAAATTCATTAGGATATGGGAATATTATTTCG 505
|||||||| | ||||||||||||||||||| |||| | |||| ||| |||||||||||||
Sbjct 705 ACAAATCA-CGGATCTTGGATTCGACGATAGATTCGTAAGGACATGTGAATATTATTTCG 763
Query 506 ACTATTGTGCAGCTGGTTTCAAGACTCTTACCCTTGGAGACTACCAGATATTTTTCTCAC 565
|||||||||||||||| |||||||||| |||| | ||||||||||||||| |||||||||
Sbjct 764 ACTATTGTGCAGCTGGCTTCAAGACTCGTACCGTAGGAGACTACCAGATAGTTTTCTCAC 823
Query 566 GTCCAGGGAATGTAGTTGCATTCGGTGATGATG-ATCCGTCCCGCAGCTCCTTTTCAACT 624
|||||||||| ||| ||||| ||||||||||| || | | | || ||||||| ||||
Sbjct 824 GTCCAGGGAACGTAATTGCACTCGGTGATGATTCATTC-TACAGCT-CTCCTTT--AACT 879
Query 625 CAGAAAAAACAAC 637
|||||||||||||
Sbjct 880 CAGAAAAAACAAC 892
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 30994468699
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5