BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg359504 Length=612 Score E Sequences producing significant alignments: (Bits) Value AT5G61090.1 | Symbols: | Polynucleotidyl transferase, ribonucl... 942 0.0 > AT5G61090.1 | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:24574902-24577714 REVERSE LENGTH=2103 Length=2103 Score = 942 bits (510), Expect = 0.0 Identities = 579/613 (94%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 1 ATGGACATAGACACTGAATGCCTGACCCCAAGTGTGGCTCTGAAGCTAATTACAGAATCA 60 |||||| |||||| ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 1492 ATGGACTTAGACAATGAATGCCTGACCCCGCGTGTGGCTCTGAAGCTTATTACAGAATCA 1551 Query 61 CAAAACACTCCCTCAAGATCACCAGAGAAGGTGAACAGAGAAACAAGTTTACCTCCTGGT 120 ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct 1552 CAAAAAACTCCCTCAAGATCACCGGAGAAGGTGAAGGGAGAAGCAAGTGTACCTCCTGGT 1611 Query 121 TTCGAGAAGATATGGACACCACCTTTGGTGAAACTTAATATACAAGGAACTTCAAACCCT 180 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 1612 TTCGAGAAGATATGGACACCACCCTTGGTGAAACTTAATATACAAGGAACATCAAACCCT 1671 Query 181 CTATCTGATCTATCCGGATCGGCTGGAATAGTGCGTGATCAATCAGGGAAGTGGGTGTTT 240 || ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1672 CTGTCTGATCTAACCAGATCGGCTGGAATAGTGCGTGACCAATCAGGGAAGTGGGTGTTT 1731 Query 241 GGGTACATCAGGTGCCATAGGAGCATCCCTGAAGTCGCAGCTGGGCTTTTGGCTATATAC 300 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1732 GGGTACATCAGGTGCCATAAGAGCATCCCTGAAGTCGTAGCTGGGCTTTTGGCTATATAC 1791 Query 301 CATGGCCTGAAATTTCTGTGGGACAGCGGTTTCCGAAGAATCCACTTGGAGACAACAAGC 360 || ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1792 CAAGGCCTCAAATATCTCTGGGACAGCGGTTTCCGAAGAATCCACTTGGAGACAACAAGC 1851 Query 361 TTTGAGATCATCAATGCTCTAACAACAAGATCGTCCCTGTTTTGTAAAAGGAAAACGCTT 420 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 1852 TTTGAGATCATCAATGCTCTAACAACAAAATCGTCCCTGTTTTGTAAAAGTAAAACGCTT 1911 Query 421 CTGGG-GTCGTGCAAGGACATGATATTGAAGGAGTGGGAGTGTGACATTTACCATATCTC 479 || || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1912 CTAGGAG-CGTGCAAGGACATGATATTGAAGGAGTGGGAGTGTGACATTTACCATATCTC 1970 Query 480 CAAAGAACAGAACTCGTGTGCAGAATGGTTAGCAAAGAGATCAGAAGAACAGCCTCAAGA 539 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1971 CAAAGAACAGAACTCATGTGCAGAATGGTTAGCAAAGAGATCAGAAGAACAGCCTCAAGA 2030 Query 540 ATTAGTTTTCTTCGAATACCCTCCTCGTGGCCTTGTGGATCTTCTGGAGAAAGACCGCCT 599 |||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||| Sbjct 2031 ATTAGTTTTCTTTGAATACCCTCCTCGAGGCCTTATGGATTTTCTGGAGAAAGACCGCCT 2090 Query 600 TGCAGCTATATAG 612 ||||||||| ||| Sbjct 2091 TGCAGCTATGTAG 2103 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29487444289 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5