BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg359589 Length=405 Score E Sequences producing significant alignments: (Bits) Value AT2G44240.1 | Symbols: | Protein of Unknown Function (DUF239) ... 577 3e-164 AT2G44220.1 | Symbols: | Protein of Unknown Function (DUF239) ... 313 1e-84 AT1G10750.1 | Symbols: | Protein of Unknown Function (DUF239) ... 63.9 1e-09 > AT2G44240.1 | Symbols: | Protein of Unknown Function (DUF239) | chr2:18289824-18292345 FORWARD LENGTH=1490 Length=1490 Score = 577 bits (312), Expect = 3e-164 Identities = 373/403 (93%), Gaps = 2/403 (0%) Strand=Plus/Plus Query 1 AGCGATGGATACCAAAAGACAGGATGCTACAATCTCCTGTGCGGCGGTTTTGTTCAGACG 60 ||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||| Sbjct 825 AGCGATGGATACCAAAAGACAGGATGCTATAATCTCGTCTGCGGTGGTTTTGTTCAGACG 884 Query 61 AACAACCAGTACTCTGTAGGTGGATCCTACAATACCGTGTCAGAATACGACGGAGCTCAA 120 | |||||| ||| ||||||||||||||||| ||||| |||| ||||||||||||||||| Sbjct 885 ACCAACCAATACACTGTAGGTGGATCCTACGTTACCGCGTCACAATACGACGGAGCTCAA 944 Query 121 CTAAG-TCTCAACCTACTTATATGGAAGGACCAAAAAACAGGAAACTGGTGGCTAAAGAT 179 || || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 945 CT-AGTTCTCAACCTACTTATATGGAAGGACCCAAAAACAGGAAACTGGTGGCTAAAGAT 1003 Query 180 AAATGACAATGACATTATCGGGTACTGGCCCGGCTCGTTGTTCAATTCTCTAGGAGATGG 239 |||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1004 TAATGACAACGATGTTATAGGGTACTGGCCTGGCTCGTTGTTCAATTCTCTAGGAGATGG 1063 Query 240 AGCTATAAAAGTTGAATGGGGAGGCGAAATCTTCACGCAAACCAGTAAGACACACACAAC 299 ||||||||||||||||||||| |||||||||||| ||| ||||||| | | ||||||||| Sbjct 1064 AGCTATAAAAGTTGAATGGGGTGGCGAAATCTTCGCGCCAACCAGTGATAGACACACAAC 1123 Query 300 CACCGATATGGGAAGTGGGCATTTTGCAGAGGAAGGGTTTAAGAAAGCGAGCTATGTACG 359 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 1124 CACCGATATGGGAAGTGGACATTTTGCAGAGGAAGGGATTAAGAAAGCGAGCTATGTAAA 1183 Query 360 AAATATTATGATAGTTGATGGGACAAATGCTCTGAGAGAACCA 402 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 AAATATTATGATAGTTGATGGGACAAATGCTCTGAGAGAACCA 1226 > AT2G44220.1 | Symbols: | Protein of Unknown Function (DUF239) | chr2:18283803-18285837 FORWARD LENGTH=1359 Length=1359 Score = 313 bits (169), Expect = 1e-84 Identities = 336/413 (81%), Gaps = 25/413 (6%) Strand=Plus/Plus Query 4 GATGGATACC-AAAAGACAGGATGCTACAATCTCCTGTGCGGC-GGTTTTGTTCAGACGA 61 ||||| |||| |||| || ||||||||||| || || ||| | ||||||||||| |||| Sbjct 688 GATGGGTACCGAAAA-ACGGGATGCTACAACCTTCTCTGC-TCAGGTTTTGTTCAAACGA 745 Query 62 ACAA-CCAGTACTCTGTAGGTGGATCCTA-CAATACCGTGTCA-GAATA-CGACGGAGCT 117 || | | ||| | |||||||||| | | || ||| ||||| | || || ||| || Sbjct 746 GTAATCGA-TACACCGTAGGTGGAT-CAATCACCACCATGTCACG-CTACCG-TGGAACT 801 Query 118 CAACTAAG-TCTCAACC-TACTTATATGGAAGGACCAAAAAACAGGAAACTGGTGGCTAA 175 ||| || | |||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct 802 CAA-TATGATCTC-TCCGTACTTATATGGAAGGACCAAAAAACAGGAAACTGGTGGCTTA 859 Query 176 -AGATAAATGACAATGACATTATCGGGTACTGGCCCGGCTCGTTGTTCAATTCTCTAGGA 234 || | ||||| || ||| |||| ||||||||||| |||||||||||||||||||||||| Sbjct 860 GAG-TCAATGAAAAAGACGTTATTGGGTACTGGCCAGGCTCGTTGTTCAATTCTCTAGGA 918 Query 235 -GATGGAGCTATAAAAGTTGAATGGGGAGGCGAAATC-TTCACGCAAA--CCAGTAAGAC 290 || | ||||| | ||||||||||||||| |||||| || || |||| || || || Sbjct 919 AGA-GAAGCTACGAGAGTTGAATGGGGAGGTGAAATCATTAACTCAAAGACCGGTGGGAG 977 Query 291 ACACACAACCACCGATATGGGAAGTGGGCATTTTGCAGAGGAAGGGTTTAAGAAAGCGAG 350 |||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 978 ACACACTACCACAGATATGGGAAGTGGGCATTTTGCAGATGAAGGTTTTAAGAAAGCAAG 1037 Query 351 CTATGT-ACGAAATATTATGATAGTTGATGGGACAAATGCTCTGAGAGAACCA 402 |||| | | ||| | ||| |||||||||||| || ||| |||| ||||||||| Sbjct 1038 CTATTTCAGGAA-TCTTAAGATAGTTGATGGAACCAATACTCTTAGAGAACCA 1089 > AT1G10750.1 | Symbols: | Protein of Unknown Function (DUF239) | chr1:3574807-3578474 REVERSE LENGTH=1747 Length=1747 Score = 63.9 bits (34), Expect = 1e-09 Identities = 34/34 (100%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 307 ATGGGAAGTGGGCATTTTGCAGAGGAAGGGTTTA 340 |||||||||||||||||||||||||||||||||| Sbjct 1353 ATGGGAAGTGGGCATTTTGCAGAGGAAGGGTTTA 1386 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19152012369 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5