BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg359604
Length=1196
Score E
Sequences producing significant alignments: (Bits) Value
AT2G43700.1 | Symbols: | Concanavalin A-like lectin protein ki... 1223 0.0
AT2G43690.1 | Symbols: | Concanavalin A-like lectin protein ki... 957 0.0
> AT2G43700.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr2:18115092-18118844 FORWARD LENGTH=3207
Length=3207
Score = 1223 bits (662), Expect = 0.0
Identities = 1031/1208 (85%), Gaps = 30/1208 (2%)
Strand=Plus/Plus
Query 1 ATGTCTCGTGTAATCATCTCACGAGTCATTTTCTTGATTCTTGCTTTGTTCTGTTGTACT 60
||||||||| |||| |||||| |||||||||||||| |||||| | ||||||||||||
Sbjct 886 ATGTCTCGTACAATCGGCTCACGGGTCATTTTCTTGATCCTTGCTCTCTTCTGTTGTACT 945
Query 61 GATAACTCCCATAGG-AAACTGATT-TGGGAAGGATCGGCTGGAGTTTTCAAAGGTTTCA 118
|| ||||||| | || |||||| || | | | ||||| |||||| |||| ||||||| ||
Sbjct 946 GAAAACTCCCGT-GGCAAACTGGTTAT-GCAGGGATCCGCTGGATTTTTTAAAGGTTACA 1003
Query 119 GGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAGCCATTCC 178
|||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| || | |||
Sbjct 1004 GGACGTTGACGAGCACCAAGAAGCACGCATATGGTCAAGCCTTCGAGGACGAGATAGTCC 1063
Query 179 CTTTCAAGAATTTC--CTC-ACAGGTGCAATGACTTCTTTCTCTTTCACCTTCTTTTTTG 235
|||||||||| ||| | | || | | || | |||||||||||| |||| ||||| ||||
Sbjct 1064 CTTTCAAGAA-TTCGGC-CAAC-GATACAGTTACTTCTTTCTCTGTCACGTTCTTCTTTG 1120
Query 236 CTATCGTCCCTGAGCATAAGCACAAAGGCTCTCACGGTATGGCCTTCGTGATTTCTCCTA 295
|||||| ||||||| |||||||||||||| |||| ||||||||||||||||| ||||| |
Sbjct 1121 CTATCGCCCCTGAGGATAAGCACAAAGGCGCTCATGGTATGGCCTTCGTGATCTCTCCCA 1180
Query 296 CAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAATGAAGTAAACA 355
||||||||||| | ||||| ||||| ||||||||||| |||||||| || ||| |||||
Sbjct 1181 CAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTTAACAAAGCAAACA 1240
Query 356 ACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGATGAAT 415
||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1241 ACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGAGGAAT 1300
Query 416 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAGGTCTATTGTAT 475
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 1301 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAATGAGGTCTATCAAAT 1360
Query 476 CTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAA-ATCTTTCTTTGATCAGT 534
||||||||||||||||||||||||||| |||||||| | || ||||||||||||| |||
Sbjct 1361 TTGCTCCTGCTGGTTATTATGATCAAGAAGGTCAATTTA-AAGATCTTTCTTTGATAAGT 1419
Query 535 GGAAATCTACTCCGAGTCACGATTTTGTAT-GACCAGAAG-AAGAAAGAGCTTAGTGTCA 592
|||| ||||||||||||||||||||||||| | ||||| | || ||| |||||| |||||
Sbjct 1420 GGAAGTCTACTCCGAGTCACGATTTTGTATAG-CCAGATGGAA-AAACAGCTTAATGTCA 1477
Query 593 CATTATCATCGCCAGAGGAAGCTTATTACCCCAAGCAA-CCACTTCTTTCGCTAAACCAA 651
| |||||||| |||||||| ||||||||||| || ||| || |||||||| | ||||||
Sbjct 1478 CCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCTTTCATTGAACCAA 1536
Query 652 GATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCTCTACGGGGTCG 711
||||| ||||| ||| |||||||||| |||||||| |||||| ||||||| ||||||||
Sbjct 1537 GATCTATCACCCTATATTTTGGAGAACATGTATGTGGGCTTCTCAGCCTCAACGGGGTCT 1596
Query 712 GTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCATAC-T-GATTGTTCCA 768
||| |||||||||| ||||||| || ||||| | | | || | | | ||| ||||||
Sbjct 1597 GTTAGAGCAATGCATTACATGTTGAGTTGGTTT-GTACATGGCGG-CGTTGAT-GTTCCA 1653
Query 769 GACCTGGA-TATCGGGA-TACCGACGTTTCCTCCATATCCCAAGGAAAAATCACTAGTAA 826
||||||| | | |||| |||| || |||||||||||||||||||||||||| || ||
Sbjct 1654 AACCTGGACT-T-GGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCTGGTTT 1711
Query 827 ATCGCATTCTTTGGGTGACTGGCTTGGCATTGGCTCTCTTAGTTGCGATGGCTGCATCAG 886
|||| ||| ||| |||||| |||||||||||| |||||| |||||| | | ||||||||
Sbjct 1712 ATCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTGCATCAG 1771
Query 887 GTTTTAGTCTCTTCTTATATAGAAAAAACCAAATGGTTCAAGAGGTTCTAGAGGAGTGGG 946
||| ||| |||| || || || | | | ||| |||| |||||||||||||||| ||||
Sbjct 1772 CTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGGAATGGG 1831
Query 947 AGATTCAAAATGGACCTCATAGGTTTTCTTACAAAGAACTCTTTAAAGCCACAAATGGTT 1006
|||| ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 1832 AGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAAGGTT 1891
Query 1007 TCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTAAGGGAACACTTCCAGGTT 1066
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1892 TCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTCCAGGTT 1951
Query 1067 CCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGAGTCAAGGAATGCAGGAAT 1126
| |||||| | ||||| |||||||| |||| |||| ||| | ||||||||||||||||
Sbjct 1952 CTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGCAGGAAT 2011
Query 1127 TCCTGGCTGAGATATCGACAATTGGTCGGCTTAGACACCCA-AATCTTGTCAGGCTTCTT 1185
|| |||||||||||||||||||||||||||||||||||| | || || ||||||||||
Sbjct 2012 TCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGGCTTCAG 2070
Query 1186 GGTTATTG 1193
||||||||
Sbjct 2071 GGTTATTG 2078
> AT2G43690.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr2:18112589-18114583 FORWARD LENGTH=1995
Length=1995
Score = 957 bits (518), Expect = 0.0
Identities = 920/1109 (83%), Gaps = 48/1109 (4%)
Strand=Plus/Plus
Query 112 GGTTTCAGGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAG 171
||||||| ||||||||| ||||||| ||| ||| | ||||||||||| ||| | ||| ||
Sbjct 115 GGTTTCACGACGTTGACAAACACCAAGAAACACGCCTATGGTCAAGCCTTCAATGACGAG 174
Query 172 CCATTCCCTTTCAAGAATTTC-CTC-ACAGGTGCA-ATGACTTC-TTTCTC-TTTCACCT 226
||||||||||||||||| ||| || || ||| | |||||||| ||| || ||| ||||
Sbjct 175 CCATTCCCTTTCAAGAA-TTCGGTCAAC-GGT-AACATGACTTCGTTT-TCATTT-ACCT 229
Query 227 TCTTTTTTGCTATCGTCCCTGAGCATA-AGCACAAAGGCTCTCACGGTATGGCCTTCGTG 285
|||| |||||||||||||||||||||| || ||||||| ||||||||||| ||||| |||
Sbjct 230 TCTTCTTTGCTATCGTCCCTGAGCATATAG-ACAAAGGTTCTCACGGTATAGCCTTTGTG 288
Query 286 ATTTCTCCTACAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAAT 345
|| ||||| || ||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 289 ATCTCTCCCACGAGAGGCATTCCTGGTGCATCCGCTGATCAGTACCTTGGTATCTTCAAC 348
Query 346 GA-AGTAAACAACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAA 404
|| | ||| | || || | ||| || ||| |||| ||||||||||| |||||| ||||
Sbjct 349 GATA-CAAATGATGGAAATAGCTCCAACCATATCATTGCTGTGGAGCTTGATATACATAA 407
Query 405 AGATGATGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAG 464
||| ||||||||||| |||||| | |||||||||||||||||||| || ||||| |||||
Sbjct 408 AGACGATGAATTTGGTGACATTGATGATAACCATGTTGGTATCAATATTAATGGTATGAG 467
Query 465 GTCTATTGTATCTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAAATCTTTC 524
|||||||||||||||||||| ||||||||||||||| | ||||| |||| |||||||||
Sbjct 468 ATCTATTGTATCTGCTCCTGCCGGTTATTATGATCAAAATGGTCAGTTCAAAAATCTTTC 527
Query 525 TTTGATCAGTGGAAATCTACTCCGAGTCACGATTTTGTAT-GACCAG-AAGAAGAAAGAG 582
||| |||||||||||||||||||||||||||||||||||| | |||| ||||| ||| ||
Sbjct 528 TTTAATCAGTGGAAATCTACTCCGAGTCACGATTTTGTATAG-CCAGGAAGAA-AAACAG 585
Query 583 CTTAGTGTCACATTATCATC-GCCAGAGGAAGCTTAT-TACCCCAAGCAACCACTTCTTT 640
|||| |||||| |||||| | || |||||||||| || | ||| ||| || |||||||
Sbjct 586 CTTAATGTCACCTTATCACCAGC-AGAGGAAGCTAATGT-CCCAAAGTGGCCTCTTCTTT 643
Query 641 CGCTAAACCAAGATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCT 700
| || ||| ||||| ||||||||||||||| |||| |||||| ||||||||||||| |
Sbjct 644 CACTGAACAAAGATTTGTCACCGTATCTTTCAAAGAATATGTATATCGGCTTCACAGCTT 703
Query 701 CTACGGGGTCGGTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCAT-ACT 758
| || |||||||| |||||||| || ||||||| ||| |||||| | || |||| | | |
Sbjct 704 CCACTGGGTCGGTCGGAGCAATACATTACATGTGGATGTGGTAT-GTATTTACCTTTATT 762
Query 759 GATTGTTCCAGACCTGGATATCGGGATACCGACGTTTCCTCCATATCCCAAGGAAAAATC 818
||||||||| | |||||| | | ||||| || ||||||||||||||||||| | | ||
Sbjct 763 -ATTGTTCCAAAACTGGATTTTGATATACCAACCTTTCCTCCATATCCCAAGGCAGAGTC 821
Query 819 ACTAG-TAAATC-GC-A-TTCTTTGGGTGAC-TGGCTTGGCATTGGCTCTCTTAGTTGCG 873
| || |||| | | | ||||| | |||| | |||| | ||||||||||| ||||||
Sbjct 822 TC-AGGTAAAGCTGATAGTTCTT-G--TGACGTT-CTTGACTTTGGCTCTCTTTGTTGCG 876
Query 874 ATGGCTGCATCAGGTTTTAGTCTCTTCTTATATA-GAAA-A-AACCAAA-TGGTTCAAGA 929
| |||||||||| ||| | | | ||||| |||| || | | || ||| | || ||
Sbjct 877 CTTGCTGCATCAGCTTTAATTGTTTTCTTCTATAAGAGACATAAG-AAACTT-TTG--GA 932
Query 930 GGTTCTAGAGGAGTGGGAGATTCAAAA-TGGACCTCATAGGTTTTCTTACAAAGAACTCT 988
|||||| ||||| ||||| | || || |||||| |||||||||||||||||||||||||
Sbjct 933 GGTTCTCGAGGAATGGGA-AGTCGAATGTGGACCACATAGGTTTTCTTACAAAGAACTCT 991
Query 989 TTAAAGCCACAAATGGTTTCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTA 1048
| || |||||||||||||||||||||||||| ||| |||| ||||| |||| |||||||
Sbjct 992 TCAATGCCACAAATGGTTTCAAACAACTTCTCGGCGAAGGGGGGTTTGGTCCTGTCTTTA 1051
Query 1049 AGGGAACACTTCCAGGTTCCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGA 1108
| || |||||| ||||||| ||||||| ||||||||||||||||||||||||| || |
Sbjct 1052 AAGGCACACTTTCAGGTTCAAATGCAAAGATTGCTGTTAAACGGGTTTCTCATGACTCAA 1111
Query 1109 GTCAAGGAATGCAG-GAATTCCTGGCTGAGATATCGACAATTGGTCGGCTTAGACACCCA 1167
||||||||||| || ||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct 1112 GTCAAGGAATG-AGAGAATTATTGGCCGAGATTTCGACTATTGGTCGGCTTAGACACCCC 1170
Query 1168 AATCTTGTCAGGCTTCTTGGTTATTGCAG 1196
||||| |||||||||||||||||||||||
Sbjct 1171 AATCTAGTCAGGCTTCTTGGTTATTGCAG 1199
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58734637650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5