BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg359650

Length=627
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G09000.1 | Symbols: ANP1, MAPKKK1, NP1 | NPK1-related protei...  93.5    2e-18


> AT1G09000.1 | Symbols: ANP1, MAPKKK1, NP1 | NPK1-related protein 
kinase 1 | chr1:2891037-2895182 FORWARD LENGTH=2270
Length=2270

 Score = 93.5 bits (50),  Expect = 2e-18
 Identities = 54/56 (96%), Gaps = 0/56 (0%)
 Strand=Plus/Plus

Query  35   AGGAGCTTGAAGAAGAAGTTAAGCTTCTCAAAAATCTCTCCCATCCAAATATAGTT  90
            |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct  424  AGGAGCTTGAAGAAGAAGTTAAGCTTCTTAAAAATCTCTCCCATCCTAATATAGTT  479



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 30240956494


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5