BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470138
Length=1440
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01420.1 | Symbols: UGT72B3 | UDP-glucosyl transferase 72B3 ... 1814 0.0
AT1G01390.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1199 0.0
> AT1G01420.1 | Symbols: UGT72B3 | UDP-glucosyl transferase 72B3
| chr1:154492-156011 REVERSE LENGTH=1520
Length=1520
Score = 1814 bits (982), Expect = 0.0
Identities = 1124/1194 (94%), Gaps = 4/1194 (0%)
Strand=Plus/Plus
Query 1 ATGGCAGAAGCAAACAGTTCACATGTAGCAATCATACCAAGTCCCGGTATAGGTCACCTC 60
|||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCAGATGGAAACACTCCACATGTAGCAATCATACCAAGTCCCGGTATAGGTCACCTC 60
Query 61 ATCCCACTCGTCGAGTTAGCAAAGCGACTCGTTGACAATCACGGTTTCACCGTCACTTTC 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 61 ATCCCACTCGTCGAGTTAGCAAAGCGACTCCTTGACAATCACGGTTTCACCGTCACTTTC 120
Query 121 GTCATCCCCGGCGATTCTCCTCCGTCTAAGGCTCAAAGCTCCGTTCTCAACTCTCTCCCT 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 121 ATCATCCCCGGCGATTCTCCTCCGTCTAAGGCTCAAAGATCCGTTCTCAACTCTCTCCCT 180
Query 181 TCCTCCATAGCCTCCTTCTTCCTCCCTCCCGCCGATCTTTCCGACGTTCCATCAACGGCT 240
||||||||||||||| |||||||||||||||||||||||||||||||||| || || |||
Sbjct 181 TCCTCCATAGCCTCCGTCTTCCTCCCTCCCGCCGATCTTTCCGACGTTCCTTCGACAGCT 240
Query 241 CGAATCGAAACTCGGATATCGCTCACTGTGACTCGTTCCAACCCGGCGCTCCGGGAGCTT 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 241 CGAATCGAAACTCGGATATCGCTCACCGTGACTCGTTCCAACCCGGCGCTCCGGGAGCTT 300
Query 301 TTTCGCTCGTTATCGGCGGAGAAACGTCTCCAGGTGGTTCTCGTCGTCGATATATTTGGT 360
||| ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||
Sbjct 301 TTTGGCTCGTTATCGGCGGAGAAACGTCTCCCGGCGGTTCTCGTCGTCGATCTATTTGGT 360
Query 361 ACGGATGCGTTCGACGTGGCTATTGAGTTCCACGTGTCGCCATACATTTTCTATGCATCA 420
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 361 ACGGATGCGTTCGACGTGGCTGCTGAGTTCCACGTGTCGCCATACATTTTCTATGCATCA 420
Query 421 AATGCCAACGTCCTCACGTTTCTGCTTCACTTGCC-AATGCTAGACGAAACGGTGTCGTG 479
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 421 AATGCCAACGTCCTCACGTTTCTGCTTCACTTGCCGAA-GCTAGACGAAACGGTGTCGTG 479
Query 480 TGAGTTTAGGGACTTAATCGAACCGGTTATGATTCCCGGTTGTATCCCTATAACCGGTAA 539
|||||||||||| |||| |||||||||||| |||||||||||| |||| |||||||||||
Sbjct 480 TGAGTTTAGGGAATTAACCGAACCGGTTATTATTCCCGGTTGTGTCCCCATAACCGGTAA 539
Query 540 AGATTTCGTCGATCCGTGTCAAGACCGAAACGATGACTCATACAAATGGCTTCTCCACAA 599
||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct 540 GGATTTCGTCGATCCGTGTCAAGACCGAAAAGATGAATCATACAAATGGCTTCTACACAA 599
Query 600 CGTCAAGAGATTCAAAGAAGCTGAAGGGATTCTAGTGAATTCCTTCATCGATTTAGAGCC 659
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 600 CGTCAAGAGATTCAAAGAAGCTGAAGGGATTCTAGTGAATTCCTTCGTCGATTTAGAGCC 659
Query 660 TAACACTATAAAGATTTTACAAGAACCTGCTCCTGATAAACCACCGGTTTACCCAATTGG 719
||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||
Sbjct 660 AAACACTATAAAGATTGTACAAGAACCGGCTCCTGATAAACCACCGGTTTACCTGATTGG 719
Query 720 CCCGTTGGTTAACTCGGGTTCATACGATGCTAACGTGCACGATGAGTACAAGTGTTTAAA 779
||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||
Sbjct 720 GCCGTTGGTTAACTCGGGTTCACACGATGCTGACGTGAACGATGAGTACAAATGTTTAAA 779
Query 780 TTGGCTAGACAGCCAACCATTCGGCTCGGTTCAATACGTATCATTTGGAAGCGGCGGAAC 839
||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct 780 TTGGCTAGACAACCAACCATTCGGGTCGGTTCTATACGTATCCTTTGGAAGCGGCGGAAC 839
Query 840 ACTCACGTGTGAACAGTTCAATGAACTCGCTTTTGGTCTTGCGGAGAGTGGAAAACGGTT 899
|||||||| ||| ||||||| ||| || ||| |||| || ||||||||||||||||||||
Sbjct 840 ACTCACGTTTGAGCAGTTCATTGAGCTGGCTCTTGGCCTAGCGGAGAGTGGAAAACGGTT 899
Query 900 TATTTGGGTCATACGAAGTCCAAGCGGGATAGCTAGTTCATCGTATTTTAATCCACATAG 959
| ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||
Sbjct 900 TCTTTGGGTCATACGAAGTCCGAGTGGGATAGCTAGTTCATCGTATTTCAATCCACAAAG 959
Query 960 CC-AAACTGATCCATTTTCGTTTTTACCACAAGGGTTCTTAGACCAAACCAAAGAAAAAG 1018
|| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 960 CCGAAA-TGATCCATTTTCGTTTTTACCACAAGGCTTCTTAGACCGAACCAAAGAAAAAG 1018
Query 1019 GTCTAGTGGTTGGGTCATGGGCTCCACAGACTCAAATTCTGACTCATACATCTGTAGGTG 1078
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1019 GTCTAGTGGTTGGGTCATGGGCTCCACAGGCTCAAATTCTGACTCATACATCTATAGGTG 1078
Query 1079 GATTTTTAACGCATTGTGGATGGAATTCGACTCTAGAAAGTATTGTTAACGGTATACCGC 1138
|||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||
Sbjct 1079 GATTTTTAACTCATTGTGGATGGAATTCGAGTCTAGAAAGTATTGTAAACGGTGTACCGC 1138
Query 1139 TCATAGCATGGCCATTATACGCAGAGCAAAAGATGAACGCATTGCTACTAGTGG 1192
||||||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 1139 TCATAGCATGGCCGTTATACGCGGAGCAAAAGATGAACGCATTGCTACTCGTGG 1192
Score = 217 bits (117), Expect = 3e-55
Identities = 153/169 (91%), Gaps = 8/169 (5%)
Strand=Plus/Plus
Query 1274 TTAGAGTCTTAAGGGACGATGGATTCTCTACGAAATCACTTAATGAAGTTTCGTTGAAGT 1333
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1337 TTAGAGTCTTAAGGGACGATGGATTCTCTACCAAATCGCTTAATGAAGTTTCGTTGAAGT 1396
Query 1334 GGAGAGCCCACCAACGAAAGATCGACCAAGAATAG-A-TCATTTATATGAATATTCTGTT 1391
||| |||||||||||||||||||||||||||| || | |||||| ||||||| |||||||
Sbjct 1397 GGAAAGCCCACCAACGAAAGATCGACCAAGAACAGGAATCATTTCTATGAATTTTCTGTT 1456
Query 1392 TGTCTTATATATAAATAAACTCTGTTAGTTGACATAAAATGTTACACAT 1440
||||||||||||||| || |||||||||||||||||| ||||||
Sbjct 1457 TGTCTTATATATAAA----CT--GTTAGTTGACATAAAATGAAACACAT 1499
> AT1G01390.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:148120-149806 REVERSE LENGTH=1687
Length=1687
Score = 1199 bits (649), Expect = 0.0
Identities = 1022/1203 (85%), Gaps = 22/1203 (2%)
Strand=Plus/Plus
Query 1 ATGGCAGAAGCAAACAGTTCACATGTAGCAATCATACCAAGTCCCGGTATAGGTCACCTC 60
||||| |||||||||| | |||| |||||||||| || ||||||||||| ||||||||
Sbjct 46 ATGGCGGAAGCAAACACTCCACACATAGCAATCATGCCGAGTCCCGGTATGGGTCACCTT 105
Query 61 ATCCCACTCGTCGAGTTAGCAAAGCGACTCGTTGA-CAATC-ACGGTTTCACCGTCACTT 118
|||||| |||||||||||||||||||||||||| | | | | || |||||||||||||
Sbjct 106 ATCCCATTCGTCGAGTTAGCAAAGCGACTCGTTCAGC-A-CGACTGTTTCACCGTCACAA 163
Query 119 TCG-TCATCCCCGGCGATTCTCCTCCGTCTAAGGCTCAAAGCTCCGTTCTCAACTCTCTC 177
| | ||||| |||| || || | ||||||||||| ||||| ||||||||||||||||||
Sbjct 164 T-GATCATCTCCGGTGAAACTTCGCCGTCTAAGGCACAAAGATCCGTTCTCAACTCTCTC 222
Query 178 CCTTCCTCCATAGCCTCCTTCTTCCTCCCTCCCGCCGATCTTTCCGACGTTCCATCAACG 237
|||||||||||||||||| | || ||||||||||||||||||||||| ||||| || ||
Sbjct 223 CCTTCCTCCATAGCCTCCGTATTTCTCCCTCCCGCCGATCTTTCCGATGTTCCCTCCACA 282
Query 238 GCTCGAATCGAAACTCGGAT-ATCGCTCACTGTGACTCGTTCCAACCCGGCGCTCCGGGA 296
|| ||||||||||||||| || |||||| ||||||||||||| ||||||||||||||
Sbjct 283 GCGCGAATCGAAACTCGGGCCAT-GCTCACCATGACTCGTTCCAATCCGGCGCTCCGGGA 341
Query 297 GCTTTTTCGCTCGTTATCGGCGGAGAAACGTCTCCAGGTGGTTCTCGTCGTCGATATATT 356
||||||| |||| ||||| || ||||| |||||| || |||||||||||||||||| ||
Sbjct 342 GCTTTTTGGCTCTTTATCAACGAAGAAAAGTCTCCCGGCGGTTCTCGTCGTCGATATGTT 401
Query 357 TGGTACGGATGCGTTCGACGTGGCTATTGAGTTCCACGTGTCGCCATACATTTTCTATGC 416
|||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||
Sbjct 402 TGGTGCGGATGCGTTCGACGTGGCCGTTGACTTCCACGTGTCACCATACATTTTCTATGC 461
Query 417 ATCAAATGCCAACGTCCTCACGTTTCTGCTTCACTTGCC-AATGCTAGACGAAACGGTGT 475
||| ||||| |||||| | ||||| | ||||||||||| || |||||| |||||||||
Sbjct 462 ATCCAATGCAAACGTCTTGTCGTTTTTTCTTCACTTGCCGAAA-CTAGACAAAACGGTGT 520
Query 476 CGTGTGAGTTTAGGGACTTAATCGAACCGGTTATGATTCCCGGTTGTATCCCTATAACCG 535
|||||||||||||| |||||| ||||||| ||| ||||||||| ||| |||| |||||||
Sbjct 521 CGTGTGAGTTTAGGTACTTAACCGAACCGCTTAAGATTCCCGGCTGTGTCCCGATAACCG 580
Query 536 GTAAAGA-TTTCGTCGATCCGTGT-CAAGACCGAAACGATGACTCATACAAATGGCTTCT 593
|||| || |||| | ||| || || |||||||||||||| ||| ||||||||| ||||||
Sbjct 581 GTAAGGACTTTCTT-GATACG-GTTCAAGACCGAAACGACGACGCATACAAATTGCTTCT 638
Query 594 CCACAACGTCAAGAGATTCAAAGAAGCTGAAGGGATTCTAGTGAATTCCTTCATCGATTT 653
||| ||| |||||| | |||||||||| ||||||||||||||||||||||| | |||||
Sbjct 639 CCATAACACCAAGAGGTACAAAGAAGCTAAAGGGATTCTAGTGAATTCCTTCGTTGATTT 698
Query 654 AGAGCCTAACACTATAAAGATTTTACAAGAACCTGCTCCTGATAAACCACCGGTTTACCC 713
|||| | || | |||||| ||||||||||| ||||||||||||||| |||| |||||
Sbjct 699 AGAGTCGAATGCAATAAAGGCCTTACAAGAACCGGCTCCTGATAAACCAACGGTATACCC 758
Query 714 AATTGGCCCGTTGGTTAACTCGGGTTCATACGA-TGCTAACGTGCACGATGAGTACA-AG 771
||||| ||| |||||||| | |||||| | | || |||| || | || ||| | |
Sbjct 759 GATTGGGCCGCTGGTTAACACAAGTTCAT-CTAATGTTAACTTGGAAGACAAGTTCGGA- 816
Query 772 TGTTTAAATTGGCTAGACAGCCAACCATTCGGCTCGGTTCAATACGTATCATTTGGAAGC 831
||||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||
Sbjct 817 TGTTTAAGTTGGCTAGACAACCAACCATTCGGCTCGGTTCTATACATATCATTTGGAAGC 876
Query 832 GGCGGAACACTCACGTGTGAACAGTTCAATGAACTCGCTTTTGGTCTTGCGGAGAGTGGA 891
||||||||||| || ||||| ||||| ||||| || ||| |||||||||||||||| |||
Sbjct 877 GGCGGAACACTTACATGTGAGCAGTTTAATGAGCTTGCTATTGGTCTTGCGGAGAGCGGA 936
Query 892 AAACGGTTTATTTGGGTCATACGAAGTCCAAGCGGGATAGCTAGTTCATCGTATTTTAAT 951
|||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||
Sbjct 937 AAACGGTTTATTTGGGTCATACGAAGTCCAAGCGAGATAGTTAGTTCGTCGTATTTCAAT 996
Query 952 CCACATAGCCAAACTGATCCATTTTCGTTTTTACCACAA-GGGTTCTTAGACCAAACCAA 1010
||||| ||| | || || || ||||||||||||||| | ||||||||||||| ||||||
Sbjct 997 CCACACAGCGAGACAGACCCCTTTTCGTTTTTACCA-ATTGGGTTCTTAGACCGAACCAA 1055
Query 1011 AGAAAAAGGTCTAGTGGTTGGGTCATGGGCTCCACAGACTCAAATTCTGACTCATACATC 1070
||| |||||| | |||||| ||||||||||||||| |||||| ||| ||||| ||||
Sbjct 1056 AGAGAAAGGTTTGGTGGTTCCATCATGGGCTCCACAGGTTCAAATCCTGGCTCATCCATC 1115
Query 1071 TGTAGGTGGATTTTTAACGCATTGTGGATGGAATTCGACTCT-AGAAAGTATTGTTAACG 1129
| | || |||||||| || ||||||||||||||||| || |||||| ||||| ||||
Sbjct 1116 CACATGCGGGTTTTTAACACACTGTGGATGGAATTCGAC-CTTAGAAAGCATTGTAAACG 1174
Query 1130 GTATACCGCTCATAGCATGGCCATTATACGCAGAGCAAAAGATGAACGCATTGCTACTAG 1189
|| |||| |||||||| ||||| |||| ||| |||||||||||||| |||||||||| |
Sbjct 1175 GTGTACCACTCATAGCGTGGCCTTTATTCGCGGAGCAAAAGATGAATACATTGCTACTCG 1234
Query 1190 TGG 1192
|||
Sbjct 1235 TGG 1237
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70983570630
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5