BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470200 Length=459 Score E Sequences producing significant alignments: (Bits) Value AT1G02405.1 | Symbols: | proline-rich family protein | chr1:48... 431 3e-120 > AT1G02405.1 | Symbols: | proline-rich family protein | chr1:489979-490505 REVERSE LENGTH=527 Length=527 Score = 431 bits (233), Expect = 3e-120 Identities = 388/457 (85%), Gaps = 34/457 (7%) Strand=Plus/Plus Query 1 TTACAACATGTCGGCTAAAACTCGCCGTTCGAAGGATCTTGCGGCCACATTCCTCATGGC 60 ||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||| Sbjct 2 TTACAACATGTCGCCTAAAACTCGCCGATCGACGGATCTTGCGGCCACAATCCTCATGGC 61 Query 61 TATCGTGATCCTCGCATCTCCGATCACAATCAACGCCGAAG-TT-----G---A------ 105 |||||||||||||||||||||||||| |||||||||||||| || | | Sbjct 62 TATCGTGATCCTCGCATCTCCGATCATAATCAACGCCGAAGATTCTTCAGCCGAAGTTGA 121 Query 106 CGTTAACTGCACACCTTGTCTCCAAAATCAACCGCCTCCGCC------------ACCTCC 153 ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 122 CGTTAACTGCATACCTTGTCTCCAAAATCAACCGCCTCCGCCTCCGTCTCCGCCACCTCC 181 Query 154 TTCTTGTACACCCGCGCCTCCTCCTCCGTCACCACCACCGCCGAAGAAGTCCTACTGCCC 213 ||||||||||||| | ||||||||||||||||||||||| |||||||| || | ||| || Sbjct 182 TTCTTGTACACCCTCCCCTCCTCCTCCGTCACCACCACCCCCGAAGAAATCTTCCTGTCC 241 Query 214 ACCATCGCCTCTGCCGCCGCCACCACCTCCACCTCCATTTACTTACATATACGCGTATCC 273 |||||||||||||||||| || ||||||||||||||| || |||| ||| | | ||||| Sbjct 242 ACCATCGCCTCTGCCGCCACCGCCACCTCCACCTCCACCTAATTACGTATTCACATATCC 301 Query 274 GCCGCCGGGAGACTTGTACCACCCTATTGACAATTACTTTGGAGCGGCTGCGGCAGGAGA 333 |||| || ||||||||||| | |||||| ||||||| ||||||||||| ||||| ||| Sbjct 302 GCCG--GG-AGACTTGTACC-C--TATTGAAAATTACTATGGAGCGGCTGTGGCAGTAGA 355 Query 334 AAGCTTCTCGGTGGTGAAGCTGGTCGTGTTTGGAGTTATTGTTTTTATGATTCTTTGATT 393 |||||| |||||| |||||||| |||||||||||||||| |||||| ||||||||||||| Sbjct 356 AAGCTTTTCGGTGATGAAGCTGTTCGTGTTTGGAGTTATGGTTTTTCTGATTCTTTGATT 415 Query 394 ATGATCACAATTTATTGA-GTTGTTGTTTTTGAACTT 429 ||||||| || ||||| | ||||||||||| |||||| Sbjct 416 ATGATCAGAAATTATTTATGTTGTTGTTTTCGAACTT 452 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21866470815 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5