BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470218 Length=2229 Score E Sequences producing significant alignments: (Bits) Value AT1G02580.1 | Symbols: MEA, EMB173, FIS1, SDG5 | SET domain-con... 2793 0.0 > AT1G02580.1 | Symbols: MEA, EMB173, FIS1, SDG5 | SET domain-containing protein | chr1:544783-549202 FORWARD LENGTH=2291 Length=2291 Score = 2793 bits (1512), Expect = 0.0 Identities = 1793/1930 (93%), Gaps = 13/1930 (1%) Strand=Plus/Plus Query 306 TTT-TTAATAAAGAGGCACCATTATTTCCAAGTGTCAACCTTCCAGTTGTTGAGCAGCTA 364 ||| || || |||| | ||||||||| ||||||||||| |||||| |||||||| ||||| Sbjct 353 TTTCTTGATGAAGATGTACCATTATTACCAAGTGTCAAGCTTCCAATTGTTGAGAAGCTA 412 Query 365 CCACGATCCCTTACATGGGTCTTCATCAAAAG--G-CATCTGATGGCTGAAAGTGATTCT 421 ||||||||| ||||||||||||||| |||||| | || ||||||||||||||||||||| Sbjct 413 CCACGATCCATTACATGGGTCTTCACCAAAAGTAGCCAGCTGATGGCTGAAAGTGATTCT 472 Query 422 GTGATTGGTAAGAGACAAATCTATTATTTGAATGGTGAGGCACTAGAATTGAGCAGCgaa 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 473 GTGATTGGTAAGAGACAAATCTATTATTTGAATGGTGAGGCACTAGAATTGAGCAGTGAA 532 Query 482 gaagaagaagaagatgaagaagaagatgaggaagaagccaagaaagaaAAATGCGAATTT 541 ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 533 GAAGATGAGGAAGATGAAGAAGAAGATGAGGAAGAAATCAAGAAAGAAAAATGCGAATTT 592 Query 542 TCCAAAGATGTAGACCGGTTTATATGGACGGTTGGGCAGGATTATGGTTTGGATGATCTG 601 || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 593 TCTGAAGATGTAGACCGATTTATATGGACGGTTGGGCAGGACTATGGTTTGGATGATCTG 652 Query 602 GTCGTGCAGCGAGCTCTCGCCAAGTTCCTCGAAGTGGAAGTTTCCGATATATTGGAAAGA 661 ||||||| ||| ||||||||||||| |||||||||||| ||||| || |||||||||||| Sbjct 653 GTCGTGCGGCGTGCTCTCGCCAAGTACCTCGAAGTGGATGTTTCGGACATATTGGAAAGA 712 Query 662 TACAATGAGCTCAAGCTTAAGAATGATGAAACTGTTGGTGAGGCTTCTGATTTGACATCC 721 |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 713 TACAATGAACTCAAGCTTAAGAATGATGGAACTGCTGGTGAGGCTTCTGATTTGACATCC 772 Query 722 AAGACAATAACTACTGCTTTTCAGGATTTTGCTGATAGACGTCATTGCCGCCGTTGCTTG 781 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || Sbjct 773 AAGACAATAACTACTGCTTTCCAGGATTTTGCTGATAGACGTCATTGCCGTCGTTGCATG 832 Query 782 ATATTTGATTGTCATATGCATGAGAAGTTTGAGCCCGAGTTTAGACCCAGCGAAGACAAA 841 ||||| |||||||||||||||||||||| ||||||||||| |||| |||||||||||||| Sbjct 833 ATATTCGATTGTCATATGCATGAGAAGTATGAGCCCGAGTCTAGATCCAGCGAAGACAAA 892 Query 842 TCTGGTTTGTTTGAGAATGAAGATAGAGAACCATGCAGTGAGCATTGTTACCTCAAGGTG 901 ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 893 TCTAGTTTGTTTGAGGATGAAGATAGACAACCATGCAGTGAGCATTGTTACCTCAAGGTG 952 Query 902 AGGAGTGTGACAGAAGCTGATCATGCGGTAGATAATGATAACTCTATATCAAACAAGAAT 961 ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| | Sbjct 953 AGGAGTGTGACAGAAGCTGATCATGTGATGGATAATGATAACTCTATATCAAACAAGATT 1012 Query 962 GTGGTCTCAGATCCAAAC-ACAACTATGTGGACGCCTGTGGAGAAGGATCTTTACTTGAA 1020 |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct 1013 GTGGTCTCAGATCCAAACAAC-ACTATGTGGACGCCTGTAGAGAAGGATCTTTACTTGAA 1071 Query 1021 AGGAGTTCAAATCTTTGGGAGAAACAGTTGTGCTATTACATTAAACATACATCGGGGGCT 1080 |||| || | || ||||||||||||||||||| | || |||||||||||| ||||||||| Sbjct 1072 AGGAATTGAGATATTTGGGAGAAACAGTTGTGATGTTGCATTAAACATACTTCGGGGGCT 1131 Query 1081 TAAGACGTGTCTAGAGGTTTACAATTACATGCTTGAACAAGATCAATGTACTATGTCATT 1140 ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 1132 TAAGACGTGCCTAGAGATTTACAATTACATGCGCGAACAAGATCAATGTACTATGTCATT 1191 Query 1141 AGTCCTTCACAAAACTACAAAAACAAAGAATCAGGTTAACAAAAAAGTATCTCGAAAAGG 1200 || |||| ||||||||||| ||| | | |||||||||| ||||||||||||||||||| | Sbjct 1192 AGACCTTAACAAAACTACACAAAGACACAATCAGGTTACCAAAAAAGTATCTCGAAAAAG 1251 Query 1201 TACTAGGTCGGTCCGCAAAAAATCCAGACTCCGAAAATATGCTCGTTATCCGCCTGCTTT 1260 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1252 TAGTAGGTCGGTCCGCAAAAAATCGAGACTCCGAAAATATGCTCGTTATCCGCCTGCTTT 1311 Query 1261 GAAGAAAACAACTAATGGAGAAGCTAAGTTTTATAAGCACTACTCACCATGCACTTGCAA 1320 ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1312 AAAGAAAACAACTAGTGGAGAAGCTAAGTTTTATAAGCACTACACACCATGCACTTGCAA 1371 Query 1321 GTCAAAATGTGGATATCAATGCCCTTGTTTAACTAATGAAAATTGCTGTGAGAAATATTG 1380 ||||||||||||| | |||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 1372 GTCAAAATGTGGACAGCAATGCCCTTGTTTAACTCACGAAAATTGCTGCGAGAAATATTG 1431 Query 1381 CGGGTGCCCGAAGGATTGCAACAATCGCTTTGGAGGATGTAATTGTGCAATTGGCCAATG 1440 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1432 CGGGTGCTCAAAGGATTGCAACAATCGCTTTGGAGGATGTAATTGTGCAATTGGCCAATG 1491 Query 1441 CACAAA-CAGACAATGTCCTTGCTTTGCTGCTAATCGTGAATGTGATCCAGATCTATGTC 1499 |||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct 1492 CACAAATC-GACAATGTCCTTGTTTTGCTGCTAATCGTGAATGCGATCCAGATCTTTGTC 1550 Query 1500 GGAGTTGTCCTCTTAGCTGTGGAGATGGCTCTCTTGGTGAGCCATCAGAGCAAATACAAT 1559 ||||||||||||||||||||||||||||| ||||||||||| || ||| |||||| |||| Sbjct 1551 GGAGTTGTCCTCTTAGCTGTGGAGATGGCACTCTTGGTGAGACACCAGTGCAAATCCAAT 1610 Query 1560 GCAAGAACATGCATTTCCTCCTTaaaaaaaaTAAGAAGATTCTCATTGGAAAGTCTAATG 1619 ||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||| ||| Sbjct 1611 GCAAGAACATGCAATTCCTCCTTCAAACCAATAAAAAGATTCTCATTGGAAAGTCTGATG 1670 Query 1620 TTCATGGATGGGGTGCATTTACACCGGACTCTCTTAAAAAGAATGAGTTTCTAGGAGAAT 1679 ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct 1671 TTCATGGATGGGGTGCATTTACATGGGACTCTCTTAAAAAGAATGAGTATCTCGGAGAAT 1730 Query 1680 ATACTGGAGAACTGATCACTCATGAGGAAGCAAATGAGCGTGGGAGAGTAGAAGATCGGA 1739 ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| Sbjct 1731 ATACTGGAGAACTGATCACTCATGATGAAGCTAATGAGCGTGGGAGAATAGAAGATCGGA 1790 Query 1740 TTGGTTCTTCATACCTCTTTACCTTGAATGATCAGCTCGAAATCGATGCTCGCCGTTATG 1799 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1791 TTGGTTCTTCCTACCTCTTTACCTTGAATGATCAGCTCGAAATCGATGCTCGCCGTAAAG 1850 Query 1800 GAAACAAGTTCAAATTTCTCAATCACTCAGCAAGACCTAACTGCTACGCCAAGTTGATGA 1859 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1851 GAAACGAGTTCAAATTTCTCAATCACTCAGCAAGACCTAACTGCTACGCCAAGTTGATGA 1910 Query 1860 TTGTGAGAGGAGATCAGAGGATTGGTCTATTTGCAGAGAGAGCAATCGAACAAAATGAGG 1919 |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct 1911 TTGTGAGAGGAGATCAGAGGATTGGTCTATTTGCGGAGAGAGCAATCGAAGAAGGTGAGG 1970 Query 1920 AGCTTTTCTTCGACTACTGCTATGGACCAGAGCATGCGGATTGGTCTCGTGGTCGAGAAC 1979 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 1971 AGCTTTTCTTCGACTACTGCTATGGACCAGAACATGCGGATTGGTCGCGTGGTCGAGAAC 2030 Query 1980 CTAGAAAGACTGGTGCTTCTAAAAGGTCTAAGGAAGCCCGTCCATCTAGATAGATTTGGA 2039 |||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| || Sbjct 2031 CTAGAAAGACTGGTGCTTCTAAAAGGTCTAAGGAAGCCCGTCCAGCTCGTTAGTTTTTGA 2090 Query 2040 TCTGAGGAGAAGCAGCAATACAAGCAGTCGTTTTTTAAAGTTATGGTAATATCAATAAAT 2099 ||||||||||||||||||| ||||||||| |||||| | ||||||||| ||||||| ||| Sbjct 2091 TCTGAGGAGAAGCAGCAATTCAAGCAGTCCTTTTTTTATGTTATGGTA-TATCAATTAAT 2149 Query 2100 AATGTAATGCTATTTTGTGTTACTAAACCAAAACTTAAgtttctgtttaatttgtttcag 2159 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 2150 AATGTAATGCTATTTTGTGTTACTAAACCAAAACTTAAGTTTCTGTTTTATTTGTTTTAG 2209 Query 2160 ggttttttgttttgtttgtcatatgtgtcttaagctctcaaagttttatttttgtatttC 2219 ||| |||||||| || | |||||||||||||| || |||||||||| |||||||||||| Sbjct 2210 GGTGTTTTGTTT-GTAT--CATATGTGTCTTAA-CTTTCAAAGTTTTCTTTTTGTATTTC 2265 Query 2220 AATTAAAAAA 2229 |||| ||||| Sbjct 2266 AATTTAAAAA 2275 Score = 440 bits (238), Expect = 3e-122 Identities = 288/311 (93%), Gaps = 8/311 (3%) Strand=Plus/Plus Query 1 AGGCGAGTGGTTAATGGAGAAGGACAACCATGAGGACGATGGTGAGGATTTGCCACCCGA 60 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 1 AGGCGAGTGGTTAATGGAGAAGGAAAACCATGAGGACGATGGTGAGGGTTTGCCACCCGA 60 Query 61 TA-TAAATCAGATAAAAGAGCAAATCGAAGAGGAGAGATTTCTGCATATCAAGA-AAACA 118 | |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | Sbjct 61 -ACTAAATCAGATAAAAGAGCAAATCGAAAAGGAGAGATTTCTGCATATCAAGAGAAA-A 118 Query 119 TTCGAGCTGAGATGCATTCCAAGTGTAGCTGCTCATGCTTCACACCATCAATCGTTTGAC 178 ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 119 TTCGAGCTGAGATACATTCCAAGTGTGGCTACTCATGCTTCACACCATCAATCGTTTGAC 178 Query 179 TTAAACCAGCCC-CTTGCAGAGGATGATAATGAAGGAGACAACAAAACACTTCTT-TCTA 236 |||||||||||| || |||||||||||||||| ||||||||||||| ||||| || || | Sbjct 179 TTAAACCAGCCCGCT-GCAGAGGATGATAATGGAGGAGACAACAAATCACTT-TTGTCGA 236 Query 237 GAATGCAAAACCCACTTCATCATTTCAGTGCCTTATCTGATTCTGATACTTACGAAGATC 296 |||||||||||||||||| |||||||||||||| |||||||| | || |||||||||||| Sbjct 237 GAATGCAAAACCCACTTCGTCATTTCAGTGCCTCATCTGATTATAATTCTTACGAAGATC 296 Query 297 AAGGTTGTGTT 307 |||||| |||| Sbjct 297 AAGGTTATGTT 307 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110591800635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5