BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470231 Length=1383 Score E Sequences producing significant alignments: (Bits) Value AT1G02720.1 | Symbols: GATL5 | galacturonosyltransferase 5 | ch... 2156 0.0 AT4G02130.1 | Symbols: GATL6, LGT10 | galacturonosyltransferase... 697 0.0 AT1G24170.1 | Symbols: GATL8, LGT9 | Nucleotide-diphospho-sugar... 134 3e-30 > AT1G02720.1 | Symbols: GATL5 | galacturonosyltransferase 5 | chr1:591826-594236 FORWARD LENGTH=1775 Length=1775 Score = 2156 bits (1167), Expect = 0.0 Identities = 1266/1314 (96%), Gaps = 5/1314 (0%) Strand=Plus/Plus Query 1 AAACGCAGAGGAGAAGAAAAGAGAGAAGGCGCAGAGTAGCATTGACATGCGAAATGTGCC 60 ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 117 AAAAGCAGAGGAGAAGAGAAGAGAGACGGCGCAGAGTAGCATTGACATGCGAAATGTGCC 176 Query 61 TCTCAGGGTTCTTATCTTACGCCTGTTTCAATCTCTTCCCCACCATGAAAGTTTTCTGAT 120 |||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 177 TCTCAGAATTCTTATCCTACGCCTGTTTCAATTTCTTCTCCACCATGAAAGTTTTCTGAT 236 Query 121 TGCTGTTTCCTCTGAAA-TTTGAAGCTTCGTAGTTTCTTCTGCATT-CTCGCAATGCATT 178 |||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 237 TGCTCTTTCCTCAGAAATTTTGAAGCTTCGTAGTTTCTTCTGCATTCCTCGCAATGCATT 296 Query 179 GGATTACGAGATTCTCCGCCATCTTCGCTGCCGCATTAGCCATGATTCTCCTTTCTCCTT 238 |||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||| Sbjct 297 GGATTACGAGATTCTCTGCTTTCTTCTCCGCCGCATTAGCCATGATTCTCCTTTCTCCTT 356 Query 239 CACTCCAATCCTTTTCTCCGGCGGCAGCTATCCGATCATCTCACCCCTACGCCGACGAAT 298 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 CGCTCCAATCCTTTTCTCCGGCGGCAGCTATCCGATCATCTCACCCCTACGCCGACGAAT 416 Query 299 TCAAACCACAACAAAACTCCGATCACTCCTCCTTCAGAGAATCTCCAATGTTCCGTAATG 358 ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 417 TCAAACCCCAACAAAACTCCGATTACTCCTCCTTCAGAGAATCTCCAATGTTCCGTAACG 476 Query 359 CCGAACAATGCAGATCTTCCGGCGAAGATTCCGGCGTCTGTAACCCTAATCTCGTCCACG 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477 CCGAACAATGCAGATCTTCCGGCGAAGATTCCGGCGTCTGTAACCCTAATCTCGTCCACG 536 Query 419 TAGCCATCACACTCGACATCGATTACCTCCGTGGCTCAATCGCAGCCGTGAATTCAATCC 478 |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 537 TAGCCATCACTCTCGACATCGATTACCTCCGTGGCTCAATCGCAGCCGTCAATTCGATCC 596 Query 479 TCCAGCACTCAATGTGTCCTCAAAGCGTCTTCTTCCACTTCCTCGTCTCCTCCGAGAT-T 537 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct 597 TCCAGCACTCAATGTGCCCTCAAAGCGTCTTCTTCCACTTCCTCGTCTCCTCCGAG-TCT 655 Query 538 CAAAACCTAGAATCTCTGATTCGTTCAACTTTCCCCAAATTGACGAATCTCAAAATTTAC 597 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 656 CAAAACCTAGAATCTCTGATTCGTTCTACTTTCCCCAAATTGACGAATCTCAAAATTTAC 715 Query 598 TATTTTGCCCCTGAGACCGTACAGTCTTTGATTTCATCTTCCGTGAGACAAGCCCTAGAG 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 TATTTTGCCCCTGAGACCGTACAGTCTTTGATTTCATCTTCCGTGAGACAAGCCCTAGAG 775 Query 658 CAACCGTTGAATTACGCCAGAAATTACTTGGCGGATCTGCTCGAGCCTTGCGTTAAGCGA 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 CAACCGTTGAATTACGCCAGAAATTACTTGGCGGATCTGCTCGAGCCTTGCGTTAAGCGA 835 Query 718 GTCATCTACTTGGATTCGGATCTCGTCGTCGTTGATGATATCGTCAAGCTTTGGAAAACG 777 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 836 GTCATCTACTTGGATTCGGATCTCGTCGTCGTCGATGATATCGTCAAGCTTTGGAAAACG 895 Query 778 GGTTTAGGCCAGAGAACAATCGGAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATAC 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 GGTTTAGGCCAGAGAACAATCGGAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATAC 955 Query 838 TTCACCGGAGGTTTTTGGTCAGATAAGAGGTTTAACGGGACGTTCAAAGGGAGAAACCCT 897 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 956 TTCACCGGAGGTTTTTGGTCAGATAAGAGGTTTAACGGGACGTTCAAAGGGAGGAACCCT 1015 Query 898 TGTTACTTCAATACTGGTGTAATGGTGATTGATTTGAAGAAGTGGAGACGATTTAGGTAC 957 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 1016 TGTTACTTCAATACTGGTGTAATGGTGATTGATTTGAAGAAGTGGAGACAATTTAGGTTC 1075 Query 958 ACGAAACGCATTGAGAAATGGATGGAGATTCAGAAGATGGAGAGGATTTATGAGCTGGGT 1017 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1076 ACGAAACGAATTGAGAAATGGATGGAGATTCAGAAGATAGAGAGGATTTATGAGCTTGGT 1135 Query 1018 TCTCTTCCTCCGTTTCTTCTGGTATTTGCTGGTCATGTAGCTCCGATTTCGCATCGGTGG 1077 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1136 TCTCTTCCTCCGTTTCTTCTGGTATTTGCTGGTCATGTAGCTCCGATTTCACATCGGTGG 1195 Query 1078 AATCAACATGGACTTGGTGGTGATAATGTTAGAGGTAGCTGCCGTGATTTGCATTCTGGT 1137 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1196 AATCAACATGGGCTTGGTGGTGATAATGTTAGAGGTAGTTGCCGTGATTTGCATTCTGGT 1255 Query 1138 CCTGTGAGTTTGCTTCATTGGTCAGGTAGTGGTAAGCCATGGTTAAGACTTGATTCCAAG 1197 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1256 CCTGTGAGTTTGCTTCACTGGTCAGGTAGTGGTAAGCCATGGTTAAGACTCGATTCCAAG 1315 Query 1198 CTTCCATGTCCTTTAGACACATTGTGGGCACCTTATGATTTGTATAAACACTCCCATTGA 1257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 CTTCCATGTCCTTTAGACACATTGTGGGCACCTTATGATTTGTATAAACACTCCCATTGA 1375 Query 1258 CACCGGTTTCTGAGTTCGACATATTCATCGCCATGAGGACTAAACCGAAGATAG 1311 || |||| ||||||||||||||||| | |||| |||||||||||||||||| Sbjct 1376 TGCCAATTTC-GAGTTCGACATATTCATGGTCATGGGGACTAAACCGAAGATAG 1428 > AT4G02130.1 | Symbols: GATL6, LGT10 | galacturonosyltransferase 6 | chr4:944367-947085 REVERSE LENGTH=1693 Length=1693 Score = 697 bits (377), Expect = 0.0 Identities = 720/884 (81%), Gaps = 30/884 (3%) Strand=Plus/Plus Query 390 CGGCGTCTGTAA-CCCTAATCTCGTCCACGTAGCCATCACACTCGACATCGATTACCTCC 448 ||||||||| || || | | | |||||||| || ||||| | ||| | || ||||| | Sbjct 455 CGGCGTCTGCAATCCGTCGT-TGGTCCACGTGGCGATCACGTTAGACGTAGAGTACCTGC 513 Query 449 GTGGCTCAATCGCAGCCGTGAATTCAATCCTCCAGCACTCAATGTGTCCTCAAAGCGTCT 508 ||||||||||||||||||| || || ||||| |||||||| ||||||| | ||||||| Sbjct 514 GTGGCTCAATCGCAGCCGTTAACTCGATCCTTCAGCACTCGGTGTGTCCAGAGAGCGTCT 573 Query 509 TCTTCCACTTCCTCGTC-TCCTCCGA-GATTCAAAACC---TAGAATCTCTGATTCGTTC 563 ||||||||||| ||| | | |||||| || | ||||| | || || ||| | | || Sbjct 574 TCTTCCACTTCATCGCCGT-CTCCGAGGAAAC-AAACCTGTTGGAGTCGCTGGTGAGATC 631 Query 564 AACTTTCCCCAAATTGACGAATCTCAAAATTTACTATTTTGCCCCTGAGACCGTACAGT- 622 |||||| | | ||| ||| |||| |||||| |||||||||||||||| || | || Sbjct 632 GGTTTTCCCGAGACTGA--AAT-TCAATATTTACGATTTTGCCCCTGAGACAGTTC-GTG 687 Query 623 CTTTGATTTCATCTTCCGTGAGACAAGCCCTAGAGCAACCGT-TGAATTACGCCAGAAAT 681 ||||||||| ||||||||||||||||| || ||||| || | |||| ||||| |||| Sbjct 688 GTTTGATTTCTTCTTCCGTGAGACAAGCTCTCGAGCAGCC-TCTGAACTACGCTAGAAGC 746 Query 682 TACTTGGCGGATCTGCTCGAGCCTTGCGTTAAGCGAGTCATCTACTTGGATTCGGATCTC 741 ||||| ||||||||||| |||||||| ||||| || ||||| ||||||||||||||||| Sbjct 747 TACTTAGCGGATCTGCTGGAGCCTTGTGTTAACCGTGTCATATACTTGGATTCGGATCTT 806 Query 742 GTCGTCGTTGATGATATCGTC-AAGCTTTGGAAAACGGGTTTAGGC-CAGAGAACAATCG 799 |||||||| ||||| |||| | |||||||||||||| | ||||| | ||| | ||||| Sbjct 807 GTCGTCGTCGATGACATCG-CTAAGCTTTGGAAAACTAGCCTAGGCTC-GAGGATAATCG 864 Query 800 GAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATACTTCACCGGAGGTTTTTGGTCAG 859 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | Sbjct 865 GAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATACTTCACCGGAGGATTCTGGTCGG 924 Query 860 ATAAGAGGTT-TAACGGGACGTTCAAAGGGAGAAACCCTTGTTACTTCAATACTGGTGTA 918 | |||| || | ||| || || | |||||| || || ||||||||||| || ||||| Sbjct 925 AGGAGAGATTCTC-CGGTACCTTTAGAGGGAGGAAGCCATGTTACTTCAACACAGGTGTG 983 Query 919 ATGGTGATTGAT-TTGAAGAAGTGGAGACGATTTAGGT-ACACGAAACGCATTGAGAAAT 976 |||||||| ||| || ||||| |||||| || | ||| |||||||||| || ||||||| Sbjct 984 ATGGTGATAGATCTT-AAGAAATGGAGAAGAGGT-GGTTACACGAAACGTATCGAGAAAT 1041 Query 977 GGATGGAGATTCAGAAGATG-GAGAGGATTTATGAGCTGGGTTCTCTTCCTCCGTTTCTT 1035 ||||||||||||||| || | ||||||||||| || || || || ||||| ||||||||| Sbjct 1042 GGATGGAGATTCAGA-GAAGAGAGAGGATTTACGAACTAGGCTCGCTTCCACCGTTTCTT 1100 Query 1036 CTGGTATT-TGCTGGTCATGTAGCTCCGATTTCGCATCGGTGGAATCAACATGGACTTGG 1094 || || || | | ||||| || ||||| || || || |||||||| || ||||||||||| Sbjct 1101 CTAGTTTTCTCC-GGTCACGTGGCTCCCATCTCTCACCGGTGGAACCAGCATGGACTTGG 1159 Query 1095 TGGTGATAATGTTAGAGGTAGCTGCCGTGATTTGCATTCTGGTCCTGTGAGTTTGCTTCA 1154 |||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| || Sbjct 1160 TGGTGACAATGTTAGAGGTAGCTGTCGTGATTTGCATCCTGGTCCTGTGAGTTTGCTGCA 1219 Query 1155 TTGGTCAGGTAGTGGTAAGCCATGGTTAAGACTTGATTCCAAGCTTCCATGTCCTTTAGA 1214 |||||| |||||||| ||||| ||| ||||||| |||||||| | || ||||| ||||| Sbjct 1220 TTGGTCTGGTAGTGGCAAGCCCTGGATAAGACTCGATTCCAAACGGCCTTGTCCCTTAGA 1279 Query 1215 CACATTGTGGGCACCTTATGATTTGTATAAACACTCCCATTGAC 1258 | |||| ||| | ||||| || |||||| ||| || ||||||| Sbjct 1280 CGCATTATGGACGCCTTACGACTTGTATCGACATTCGCATTGAC 1323 > AT1G24170.1 | Symbols: GATL8, LGT9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:8557216-8558832 REVERSE LENGTH=1617 Length=1617 Score = 134 bits (72), Expect = 3e-30 Identities = 380/521 (73%), Gaps = 51/521 (10%) Strand=Plus/Plus Query 751 GATGATATCGTC-AAGCTTTGGAAAACGGGTTT-A---GGCCA-GAGAACAATCGGAGCT 804 ||||||||| | ||||||||||| |||| ||| | || || ||| | ||||||||| Sbjct 801 GATGATATC-ACAAAGCTTTGGAACACGGTTTTGACCGGGTCACGAG-TC-ATCGGAGCT 857 Query 805 CCGGAGTATTGTCACGCGAATTTCACGAAATACTTCAC--CGGAGGTTTTTGGTCAGATA 862 |||||||||||||||||||| ||||| | || ||||| | | |||| | ||||||| Sbjct 858 CCGGAGTATTGTCACGCGAACTTCACTCAGTATTTCACTTCCG-GGTTCT-GGTCAGACC 915 Query 863 AGAGGTTTAACGGGACGT--TCAAAGGGAGAAAC-CCTTGTTACTTCAATACTGGTGTAA 919 | | |||| |||| | | || ||| ||| ||||| || ||||| || || || | Sbjct 916 CG-GCTTTACCGGGTC-TAATCTC-GGGTCAAAAGCCTTGCTATTTCAACACAGGAGTGA 972 Query 920 TGGTGATTGAT-TTGA-AGAAGTGGAGACGATTT-AGGTACACGAAACGCA-TT-GAGAA 974 ||||||| ||| ||| ||| |||||| || | |||| || | | | || ||| | Sbjct 973 TGGTGATGGATCTTGTTAGA--TGGAGA-GAAGGGAATTACA-GAGA-GAAGTTAGAGCA 1027 Query 975 ATGGATGGAGATT-CAGAAGATGGA-GAGGATTTATGAGCTGGGTTCTCTT-CCTCCGTT 1031 ||||||| | ||| ||||||| | | ||| || || || || || || || || ||||| Sbjct 1028 ATGGATGCA-ATTGCAGAAGAAG-ATGAGAATCTACGATCTTGGATCA-TTACCACCGTT 1084 Query 1032 TCTTCTGGTATTTGCTGGTCATGTAGCTCCGATTTCGCATCGGTGGAATCAACATGGACT 1091 |||| |||| ||||| ||| |||| | | ||| ||| | ||||| |||||||| | Sbjct 1085 TCTTTTGGTGTTTGCGGGTAATGTTGAAGCTATTGATCATAGATGGAACCAACATGGT-T 1143 Query 1092 T-GGTGGTGATAATGTTA-GAGGTAGCTGCCG-TGATTTGCATTCTGGTCCTGTGAGTTT 1148 | || || || ||| | | |||| || || || | ||| |||| ||||||||||||| || Sbjct 1144 TAGGAGGAGACAATAT-ACGAGGAAGTTGTCGGTCATT-GCATCCTGGTCCTGTGAGCTT 1201 Query 1149 GCTT-CATTGGTCAGGTAGTGGTAAGCCATGG-TTAAGACTTGATTCCAAGCTTCCATGT 1206 | || |||||| |||| |||||||||||| ||| |||||||| ||| || ||| Sbjct 1202 G-TTGCATTGGAGTGGTAAAGGTAAGCCATGGGTTA-GACTTGATGAGAAGAGGCCTTGT 1259 Query 1207 CCTTTAGA-CA-CATTGTGGGCA-CCTTATGATTTGTATAA 1244 || || || || | || |||| | || |||||||||||||| Sbjct 1260 CCGTTGGATCATC-TT-TGGG-AGCCATATGATTTGTATAA 1297 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68122139565 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5