BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470259
Length=3969
Score E
Sequences producing significant alignments: (Bits) Value
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1... 6045 0.0
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4... 3048 0.0
> AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:645092-651907
REVERSE LENGTH=4131
Length=4131
Score = 6045 bits (3273), Expect = 0.0
Identities = 3763/3988 (94%), Gaps = 80/3988 (2%)
Strand=Plus/Plus
Query 18 CGGCGGCGTTGAAGAAGAAG---TA-AGAGA-AG-TATGGTTGAGACCAGACGCAGCTCT 71
|||||||| ||||||||||| || ||||| || ||||||||| || ||||| ||||||
Sbjct 75 CGGCGGCGGTGAAGAAGAAGAATTAGAGAGAGAGATATGGTTGATACGAGACGTAGCTCT 134
Query 72 TCCACTTCCAAGCGTTTTTCAGCTGAAACAAGTTCATCCTCACGCCCTACCAAACGATCC 131
|| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct 135 TCTGCTTCCAAGCGTTTTTGTGCTGCAACAAGTTCATCCTCACGTCCTACCAAACGATCC 194
Query 132 AA-GCGGGCGGCCGAACCGGCAGCATCTTCGTCGGCGAGTGAGGTGCCGATTGAGAATCA 190
|| || |||||| ||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 195 AAGGC-GGCGGCGGAACCGGCATCGTCTTCGTCGGCGAGTGAGGTGCCGATTGATAATCA 253
Query 191 AGGACCGGTTTCGGATCCTGGATCGGA-ATCTGGAGAGCAAGAACTAAGAACTTCTGATC 249
|| ||||||||||||||||||||| | ||||||||| | ||||| |||||||||||||
Sbjct 254 AGCACCGGTTTCGGATCCTGGATC-AATATCTGGAGACCCGGAACTTAGAACTTCTGATC 312
Query 250 CGCAGAGTAATGATGCGGAAAGGCCAGTTACTAACACCGTTGTGCCCGCGATGGAGACCG 309
|||||||||| |||||||| ||||||||||||| ||||| |||||| |||||||||||||
Sbjct 313 CGCAGAGTAACGATGCGGAGAGGCCAGTTACTACCACCGATGTGCCGGCGATGGAGACCG 372
Query 310 ACACAAATCCAGAAGTTGAAGGCTTCGTGACGCCTACACCTGCAGGTCAAGTGGTGGTGG 369
|||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 373 ACACAAATCCAGAACTTGAAGGCTTGGTGACGCCTACACCTGCAGGTGAAGTGGTGGTGG 432
Query 370 AAGCTGAGAAATCAAAATCCTCCAAGAAGCGGATTGCTAAGGCTCCTTGGGCCAAGCTGC 429
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 433 AAGCTGAGAAATCGAAATCCTCAAAGAAGCGGATTGCTAAGGCTCCTTGGGCCAAGCTTC 492
Query 430 TTTCTCAGTATCCTCAGAACCCTCAT-TGTGTCATGAGAGGCTCTGTGTTTACTGTTGGA 488
||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 493 TTTCTCAGTTTCCTCAGAACCCTCATCT-TGTCATGAGAGGCTCTGTGTTTACTGTTGGA 551
Query 489 CGGCGAGGATGCGATTTATGTATCAGAGATCATTCCATGCCCAATGTTCTATGTGAACTA 548
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 552 CGGCGAGCCTGCGATTTATGTATCAGAGATCATTCTATGCCCAATGTTCTATGTGAACTA 611
Query 549 AGGCAGTCTGAGCACGGAGGTCCATCGGTTGCATCACTGGAGATAATAGGGAATGGAGTA 608
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 612 AGGCAGTCTGAGCACGGAGGTCCATCAGTTGCATCGCTGGAGATAATAGGGAATGGAGTA 671
Query 609 CTTGTTCAGGTCAATGGCAAGATTTACCAAAGGAGTACTTGTGTTCATCTACGAGGTGGC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 672 CTTGTTCAGGTCAATGGCAAGATTTACCAAAGGAGTACTTGTGTTCATCTACGGGGTGGC 731
Query 669 GATGAAATTATCTTCAGCACCCCTGGGAAACATGCTTATATATTTCAGCCTCTTAAAGAT 728
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 GATGAAATTATCTTCACCACCCCTGGGAAACATGCTTATATATTTCAGCCTCTTAAAGAT 791
Query 729 GAAAATCTAGCTACTCCAGATAGAGCTTCTTCATTGAGCATTTTTGAAGCGCAGAGTGCC 788
|||||||||||| ||||||| ||| ||||||| |||||| ||||||||||||||||||||
Sbjct 792 GAAAATCTAGCTGCTCCAGACAGAACTTCTTCCTTGAGCCTTTTTGAAGCGCAGAGTGCC 851
Query 789 CCTCTGAAAGGGCTTCATGTTGAGACAAGAGCAGGAGACTC-T--TC----------A-- 833
||||||||||||||||| ||||||||||||||| ||||||| | || |
Sbjct 852 CCTCTGAAAGGGCTTCACGTTGAGACAAGAGCAAGAGACTCTTCATCTGTTGATGGAACT 911
Query 834 ---TCTTTATTGGCGTCTATATCAAAGTTACATAATGTCCCTTTTCTACCACCTACTGCT 890
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 912 GCCTCTTTATTGGCGTCTATATCAAAGTTACAAAATGTCCCTTTTCTACCACCTACTGCT 971
Query 891 AAAAGTGTCAAAATTCAGCAAAATTCAGAGGTTCCTGT-TCTACCTTCTAGCTGCAATGA 949
||||||||||||| ||||||||||||||||| ||||| | |||||||||||||| ||||
Sbjct 972 AAAAGTGTCAAAAGGCAGCAAAATTCAGAGGTCCCTGTGT-TACCTTCTAGCTGCGATGA 1030
Query 950 TTGTATTCTGGATGTTGACATGAACGATGATGATAGTCATAATGATCATGCTGCTATTGC 1009
|| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||
Sbjct 1031 TTTTATTCTGGATGTTGACTTGAACGATGCTGATAGTAATAATGATCATGCTGCTATTGC 1090
Query 1010 TTCAACGGAGAAAACTGTTGCTTCGACCTCTTGTGCTGCCAACGATGACC-TGAATGCAG 1068
||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct 1091 TTCAATGGAGAAAACTGTTGCTTCGACTTCTTGTGCTGCCAACGATGACCATG-ATGCAG 1149
Query 1069 ATGGAAATGGAATGGATCCTTTTCAAGAAGCTGAGGGTGGAAATATTCCTGGTTCTGGTT 1128
|||| |||||||||||||||||||||||| |||||| |||||||||||||| | ||| ||
Sbjct 1150 ATGGGAATGGAATGGATCCTTTTCAAGAACCTGAGGCTGGAAATATTCCTGATCCTGCTT 1209
Query 1129 ATGAAATTAGACCAATTTTGAGTTTACTTGGGGATCCTTCTGAATTTGATTTAAGGGGTA 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 ATGAAATTAGACCAATTTTGAGTTTACTTGGGGATCCTTCTGAATTTGATTTAAGGGGTA 1269
Query 1189 GCATTTCCAAAATACTGGTGGATGAACGAAGGGAAGTGAGGGAAATGCTGAAAGAATATG 1248
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1270 GCATTTCCAAAATACTGGTGGATGAACGAAGGGAAGTGAGGGAAATGCCGAAAGAATATG 1329
Query 1249 AACGTCCATCAGCTTCGGTGTTAACTAGACGTCAAGCACATAAGGATAGACTGCGAGGAG 1308
||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1330 AACGTCCATCAGCTTCGGTATTAACTAGACGTCAAGCGCATAAGGATAGTCTGCGAGGAG 1389
Query 1309 GAATACTCAATCCTCAGGACATAGAAGTTTCTTTTGAGAACTTTCCATATTTCTTAAGTG 1368
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1390 GAATACTCAATCCTCAGGACATAGAAGTTTCTTTTGAGAACTTCCCATATTTCTTAAGTG 1449
Query 1369 GCACAACTAAGGATGTTTTGATGATATCAACATATGCCCATATGAAGTATGGAAGGGAGT 1428
|||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |
Sbjct 1450 GCACAACTAAGGATGTTTTGATGATATCCACATATGCCCATATAAAGTATGGAAAGGAAT 1509
Query 1429 ATGCGA-AGTATGCATCAGATTTGCCAACAGCGTGTCCCCGTATCTTACTCTCTGGACCA 1487
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 ATGC-AGAGTATGCATCAGATTTGCCAACAGCGTGTCCCCGTATCTTACTCTCTGGACCA 1568
Query 1488 TCTGGTTCTGAGATATATCAGGAAATGTTAGCAAAAGCGCTTGCGAAAAAATTTGGGGCC 1547
||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 1569 TCTGGCTCTGAGATATATCAGGAAATGTTAGCAAAAGCGCTTGCGAAACAATGTGGGGCC 1628
Query 1548 AAATTGATGATTGTTGACTCTCTCTTGTTACCTGGGGGATCAACACCCAAGGAAGCAGAT 1607
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1629 AAATTGATGATTGTTGACTCTCTCTTGTTACCTGGGGGTTCAACACCCAAGGAAGCAGAT 1688
Query 1608 TCTACCAAAGAAAGTTCTAGGCGTGAAAGACTGTCTGTGCTTGCTAAACGAGCTGTACAG 1667
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1689 ACTACCAAAGAAAGTTCTAGGCGTGAAAGACTGTCCGTGCTTGCTAAACGAGCTGTACAA 1748
Query 1668 GCTGCACAAGCTGCTGTTTTGCAGCATAAGAAACCAATTTCAAGTGTTGAGGATGATATA 1727
||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct 1749 GCTGCACAAGCTGCTGTTTTGCAGCATAAGAAACCAATTTCAAGTGTAGAGGCTGGTATA 1808
Query 1728 ACAGGTGGATCAACATTAAGCTCTCAGGCTGTTCCGAGGCAAGAAGTATCAACTGCAACC 1787
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1809 ACAGGTGGATCAACATTGAGCTCTCAGGCTGTTCGGAGGCAAGAAGTATCAACTGCAACC 1868
Query 1788 TCTAAAAGTTATACCTTTAAAGCAGGTGATAGAGTAAGGTTTCTAGGCCCTTCAACTTCT 1847
||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||
Sbjct 1869 TCTAAAAGTTACACCTTCAAAGCAGGTGATCGAGTAAGGTTTTTAGGCCCTTCAA----- 1923
Query 1848 TCTCTTGCTTCTCTTGCTTCTCTCCAAGCTCCACCTAGGGGACCGGCAACAGGTTTTCAG 1907
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1924 ---CTT-CTTCTCTTGCTTCTCTCCGAGCTCCACCTAGGGGACCGGCAACAGGTTTTCAA 1979
Query 1908 GGAAAAGTACTCCTTGCATTTGAAGGCAATGGATCTTCAAAAATTGGGGTTAGATTTGAT 1967
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1980 GGAAAAGTACTCCTTGCGTTTGAAGGCAATGGATCTTCAAAAATCGGGGTTAGATTTGAT 2039
Query 1968 AGGTCGATACCAGATGGCAATGATCTTGGTGGTCTATGCGAAGAAGACC----------- 2016
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 AGATCGATACCAGATGGCAATGATCTTGGTGGTCTATGCGAAGAAGACCATGGTTTTTTT 2099
Query 2017 ---A-TGCGAGTTCTCTTCGGTTAGAAAGTTCTTCCAGTGACGACGCTGATAAACTTGCC 2072
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2100 TGTACTGCGAGTTCTCTTCGGTTAGAAAGTTCTTCCAGTGACGATGCTGATAAACTTGCC 2159
Query 2073 ATTAATGAAATCTTTGAGGTGGCTTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTC 2132
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2160 ATTAATGAAATCTTTGAGGTAGCTTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTC 2219
Query 2133 CTCAAAGACATTGAGAAATCTGTGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGC 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 CTCAAAGACATTGAGAAATCTGTGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGC 2279
Query 2193 AAGCTTGAGAATTTACCCGAGAATATTGTTGTCATAGCTTCACAAACCCAGTTGGACAGC 2252
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct 2280 AAGCTTGAGAATTTACCGGAGAATATTGTTGTCATAGCTTCGCAAACCCAGTTGGACAAC 2339
Query 2253 CGAAAGGAAAAATCCCACCCTGGAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACA 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 CGAAAGGAAAAATCCCACCCTGGAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACA 2399
Query 2313 GCACTACTGGATCTTGCATTTCCGGATAATTTTGGTGGTAGACTGCAGGATAGGAACAAA 2372
||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2400 GCACTGCTGGACCTTGCATTTCCGGATACTTTTGGTGGTAGACTGCAGGATAGGAACACA 2459
Query 2373 GAAATGCCTAAATCAGTGAAACAAATCACTAGGCTATTTCCAAACAAAGTGACCATCCAG 2432
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 GAAATGCCTAAAGCAGTGAAACAAATCACTAGGCTATTTCCAAACAAAGTGACCATCCAA 2519
Query 2433 TTACCTGAGGATGAAGCTTTGCTGGTGGACTGGAAGGATAAACTTGAACGTGATACAGAG 2492
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct 2520 TTACCTGAGGATGAAGCTTCGCTGGTCGACTGGAAGGATAAACTTGAACGTGATACTGAG 2579
Query 2493 ATCCTGAAGGCTCAAGCTAATATTACCAGCATCCGTGCGGTCCTTAGCAAAAACCATCTA 2552
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct 2580 ATCCTGAAGGCTCAAGCTAATATTACAAGCATCCGTGCGGTCCTTAGCAAAAATCAGCTA 2639
Query 2553 GTCTGCCCTGACCTTGAAACCTTGTGCATCAAAGACCAAACCCTTCCTTCTGATAGTGTG 2612
|||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 2640 GTCTGCCCTGACATTGAAATCTTGTGCATCAAAGATCAAACCCTTCCTTCTGATAGTGTG 2699
Query 2613 GAGAAAGTGGTTGGCTTTGCTTTCAATCACCATCTTATGAACTGCGCAGAACCTACAGTC 2672
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2700 GAGAAAGTGGTTGGCTTTGCTTTCAATCACCATCTTATGAACTGCTCAGAACCTACAGTC 2759
Query 2673 AAGGACAACAAGCTTATCATCTCGGCAGAAAGCATCACATATGGCCTGGAGCTGTTGCAT 2732
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2760 AAGGACAACAAGCTTATCATCTCGGCAGAAAGCATCACATATGGCCTGCAGCTGTTGCAT 2819
Query 2733 GGGATTCAAAACGAAAACAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACTGAGAAT 2792
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2820 GAGATTCAAAACGAAAACAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACAGAGAAT 2879
Query 2793 GAATTCGAGAAAAAACTCCTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTTCTTTC 2852
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2880 GAATTCGAGAAAAAACTACTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTTCTTTC 2939
Query 2853 AGTGATATTGGGGCTTTGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCT 2912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2940 AGTGATATTGGGGCTTTGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCT 2999
Query 2913 CTTCAAAGACCCGAATTGTTTGGCAAAGGTCAACTTACAAAGCCTACTAAGGGTATACTG 2972
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3000 CTTCAAAGACCCGAATTGTTTGGCAAAGGTCAACTTACAAAGCCTACAAAGGGTATACTA 3059
Query 2973 TTGTTTGGACCGCCTGGTACGGGGAAGACAATGTTGGCAAAAGCTGTAGCAACTGAGGCT 3032
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 3060 TTGTTTGGACCGCCTGGTACGGGGAAGACAATGCTGGCAAAAGCTGTAGCAACCGAGGCT 3119
Query 3033 GGGGCAAACTTTATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGA 3092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3120 GGGGCAAACTTTATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGA 3179
Query 3093 GAGAAGTACGTTAAAGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTT 3152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3180 GAGAAGTACGTTAAAGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTT 3239
Query 3153 GTTGATGAGGTTGATAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATG 3212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3240 GTTGATGAGGTTGATAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATG 3299
Query 3213 CGTAAGATGAAGAACGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAA 3272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3300 CGTAAGATGAAGAACGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAA 3359
Query 3273 AGAGTTTTAGTATTGGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGA 3332
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3360 AGGGTTTTAGTATTGGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGA 3419
Query 3333 CGGCTTCCCCGAAGGTTGATGGTTAATCTACCGGATTCAGCAAACAGATCGAAGATCTTG 3392
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3420 CGGCTTCCCCGAAGGTTGATGGTTAATCTGCCGGATTCAGCAAACAGATCGAAGATCTTG 3479
Query 3393 AGCGTAATTTTGGCGAAAGAAGAGATGGCAGAAGACGTAGATTTAGAAGCAATAGCAAAT 3452
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3480 AGCGTGATTTTGGCGAAAGAAGAGATGGCAGAAGACGTAGACTTAGAAGCAATAGCAAAT 3539
Query 3453 ATGACAGATGGGTACTCAGGGAGTGATTTAAAGAATCTTTGCGTGACCGCGGCACATCTT 3512
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3540 ATGACAGATGGGTACTCAGGGAGTGACTTAAAGAATCTTTGCGTGACCGCGGCACATCTT 3599
Query 3513 CCTATCCGAGAGATTCTGGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAATCCGAAAAC 3572
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3600 CCTATCCGAGAGATTCTTGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAAGCCGAAAAC 3659
Query 3573 CGACCAACGCCACAGTTATATAGCAGTAGAGACATTAGACCCTTGAACATGAATGATTTC 3632
||| ||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 3660 CGAGCAATGCCACAGCTATATAGCAGTACAGACGTTAGACCCTTGAACATGAATGATTTC 3719
Query 3633 AAGGCCGCACATGATCAGGTATGTGCGAGTGTGTCGTCTGATTCATCGAACATGAATGAG 3692
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3720 AAAACCGCACATGATCAGGTATGTGCGAGTGTGGCGTCTGATTCATCGAACATGAATGAG 3779
Query 3693 CTCCAGCAATGGAACGAGCTCTACGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGC 3752
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3780 CTCCAGCAATGGAACGAGCTCTATGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGT 3839
Query 3753 TACTTCATGTAAAGAGAAAACAGAGAGGTTGTGTTTTCT-AGTTTATC-A-ATATATAT- 3808
||||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||
Sbjct 3840 TACTTCATGTAAAGAGAAAACAGAGAGGTTGTGTTTTGTTAGTTTATATATATATATATA 3899
Query 3809 T-TA-A-ATC--TCTCT-T-TAATTTATATATTGTACagagagatagagagagaagagag 3861
| || | || ||||| | |||||||||| |||||||||||||| ||||||||||||||
Sbjct 3900 TATATATATAAATCTCTCTCTAATTTATATGTTGTACAGAGAGATTGAGAGAGAAGAGAG 3959
Query 3862 TC---C---TCTTGAATTGTCTAAAAA-TGTTTTGTTCGGAGCTGCCTCAATTCTTTTCT 3914
|| | |||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 3960 TCAGTCCCCTCTTGAATTGTCTAAAAAATGTTTTGCTCGGAGCTGCCTCAATTCTTTTCT 4019
Query 3915 TTCTTTCTCCaaaaaaaTAT-CTA-TAT 3940
|||||||||||||||||||| ||| |||
Sbjct 4020 TTCTTTCTCCAAAAAAATATTCTAATAT 4047
> AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:1081759-1088846
REVERSE LENGTH=4287
Length=4287
Score = 3048 bits (1650), Expect = 0.0
Identities = 3074/3743 (82%), Gaps = 171/3743 (5%)
Strand=Plus/Plus
Query 139 CGGCCGAACCGGCAGCATCTTCGTCGGCGAGTGAGGTGCCGATTGAGAATCAAGGACCGG 198
|||| |||||||| | ||||| || ||||| || || ||||| |||||||||||||| |
Sbjct 309 CGGCGGAACCGGCTGGTTCTTCATCAGCGAGCGAAGTTCCGATCGAGAATCAAGGACCTG 368
Query 199 TTTCGGATCCTGGATCGGAATCTGGAGAGCAAGAACTAAGAACTTCTGATCCGCAGAG-T 257
||||||||||||||||||||||||||||| ||||| || |||||||||| ||| | |
Sbjct 369 CTTCGGATCCTGGATCGGAATCTGGAGAGCCGGAACTTGGATCTTCTGATCCACAG-GCT 427
Query 258 AAT-GATGCGGA-AAGGCCAGTTACTAAC-ACCGTTGTGCCC-GCGATGGAG-A----CC 308
|| |||||||| || ||| ||| | || || | ||| ||| | ||||||| | ||
Sbjct 428 -ATGGATGCGGAGAA-GCCTGTT-GTTACAACTGATGT-CCCTGTGATGGAGAACTCTCC 483
Query 309 -G--A-C-A--CAAATCCAGAAGTTGAAGGCTTCGTGACGCCTACACCT-GCAGGTCAAG 360
| | | | | || || ||||| |||| ||| | || ||||| | | |||||| |||
Sbjct 484 TGAAACCGACGCTAACCCTGAAGTCGAAGTCTTGGCCACACCTAC-CGTAGCAGGTGAAG 542
Query 361 TGGTGGTGGAAGCTGAGAAATCAAAATCCTCCAAGAAGCG-GATTGCT-AAGGCTCCTTG 418
||||| ||| ||||| ||||| || | | |||||||| | || | |||||||| ||
Sbjct 543 CGGTGGCGGATGCTGACAAATCTAAGGCGGCTAAGAAGCGAGCTT--TAAAGGCTCCATG 600
Query 419 GGCCAAGCTGCTTTCTCAGTATCCTCAGAACCCTCATTGTGTCATGAGAGGCTCTGTGTT 478
||| ||||| ||||| |||||| ||||||| ||||| ||||||| |||||| |||||||
Sbjct 601 GGCGAAGCTACTTTCCCAGTATTCTCAGAATCCTCACCGTGTCATCAGAGGCCCTGTGTT 660
Query 479 TACTGTTGGACGGCGAGGATGCGATTTATGTATCAGAGATCATTCCATGCCCAATGTTCT 538
|||||||||||| || ||||| ||||||| ||||||||| || | ||||||| ||
Sbjct 661 TACTGTTGGACGCCGGGGATGTGATTTATCTATCAGAGACCAAGCTATGCCCAGCACCCT 720
Query 539 ATGTGAACT-AAGGCAGTCTGAGCACGGAGGTCCATCGGTTGCATCACTGGAGATAATAG 597
|||||||| || ||||||||||||||| |||||||| |||||||| || |||||| |||
Sbjct 721 CTGTGAACTGAA-GCAGTCTGAGCACGGTGGTCCATCAGTTGCATCCCTTGAGATATTAG 779
Query 598 GGAATGGAG-TACTTGTTCAGGTCAATGGCAAGAT-TTACCA-AAGGAGTACTTGTGTTC 654
| ||||||| || ||||||| |||||||||||| | |||||| || |||||||||||||
Sbjct 780 GAAATGGAGTTA-TTGTTCATGTCAATGGCAAG-TGTTACCAGAA-AAGTACTTGTGTTC 836
Query 655 ATCTACGAGGTGGCGATGAAATTATCTTCAGCAC-CCCTGGGAAACATGCTTATATATTT 713
||||||| ||||| || || | ||||||||| | ||||||||||||||||||||||
Sbjct 837 ATCTACGGGGTGGTGACGAGGTGATCTTCAGC-CTTAATGGGAAACATGCTTATATATTT 895
Query 714 CAGCCTCTTAAAGATGAAAATCTAGCTA-CTCCAGATAGAGCTTCTTCATTGAGCATTTT 772
|| ||| |||||||||||||| |||| | |||| || ||||||||||| ||||| || |
Sbjct 896 CAACCTGTTAAAGATGAAAATTTAGC-AGCTCCTGACAGAGCTTCTTCGTTGAGTATATG 954
Query 773 TGAAGCGCAGAGTGCCCCTCTGAAAGGGCTTCATGTTGAGACAAGAGCA-G-GA----GA 826
|||||| | | ||||||||||||||||| ||||||| |||||||| ||| | || ||
Sbjct 955 TGAAGCTCGGGGTGCCCCTCTGAAAGGGGTTCATGTCGAGACAAGGGCAGGAGATGTTGA 1014
Query 827 ------CTC-----TTCAT-----CT-T-TATTGGCGTCTATATCAAAGTTACATA-ATG 867
||| || || || | ||||||| ||| |||||||| | | | |
Sbjct 1015 TGGGGCCTCAGATGTTGATGGGGCCTCTATATTGGCATCTCTATCAAAGCTCCGCAGCT- 1073
Query 868 TCCCTTTTCTACCACCTACTGCTAAAAG-TGTCAAAATTCAGCAAAATTCAGAGGTTCCT 926
||| | |||||||||| | |||| |||| || ||| | ||||||||| | | |||||||
Sbjct 1074 TCCATCTTCTACCACCAATTGCT-AAAGCTGGCAAGAGGCAGCAAAATCCTGCGGTTCCT 1132
Query 927 GTTCTACCTTCTAGCTGCAATGATTGTATTCT-GGATGTTGACATGAACGATGATGATAG 985
|| ||||||| || | ||||||||| | ||| |||| ||||||||||||| ||||||
Sbjct 1133 GTGGTACCTTCCAGTTTCAATGATTGCA-TCTCGGATACAGACATGAACGATGCTGATAG 1191
Query 986 TCATAATGATCATGCTGCTATTGCTTCAACGGAGAAAA---CTGTTGCTTCGACCTCTTG 1042
| ||||||| ||||||||| ||||||| ||| |||| ||| |||||| ||| || |
Sbjct 1192 TAATAATGACCATGCTGCTGTTGCTTCTGTGGAAAAAATTGCTGCTGCTTCTACCCCTGG 1251
Query 1043 TGCTGCCAACGATG-ACCTGAATG-CAGATGGAAATGGAATGGATCCTTTTCAAGAAGCT 1100
| ||||||| || | ||||||||| | ||||| | |||| |||| |||||||||||||||
Sbjct 1252 TACTGCCAATGA-GAACCTGAATGTC-GATGGCAGTGGATTGGACCCTTTTCAAGAAGCT 1309
Query 1101 GAGGGTGGAAATATTCCTGGTTCTGGTTATGAAATTAGACCAATTTTG-AGTTTACTTGG 1159
|| ||||||||| | |||| | |||||||||||||||||||||| || | || |||||
Sbjct 1310 GATGGTGGAAATGTCCCTGCTGCTGGTTATGAAATTAGACCAATCGTGCACCTT-CTTGG 1368
Query 1160 -GGATCCTTCTGAATTTGATTTAAGGGGTAGCATTTCCAAAATACTGGTGGATGAACGAA 1218
| || ||||| ||||||| ||||||||||||| |||| | ||| ||||||||||||
Sbjct 1369 TGAAT-CTTCTTCATTTGATATAAGGGGTAGCATCTCCAGATTAC---TGGATGAACGAA 1424
Query 1219 GGGAAGTGAGGGAAATGCTGAAAGAATATGAACGTCCATCAGCTTCGGTGTTAACTAGAC 1278
||||||||| ||| | || | ||||| ||| | | ||||| | | | | |||||||
Sbjct 1425 GGGAAGTGAAAGAATTCCTCAGAGAATTTGACCTTTCATCAAC-T--ATATCGACTAGAC 1481
Query 1279 GTCAAGCACATAAGGATAGACTGCGAGGAGGAATACTCAATCCTCAGGACATAGA-AGTT 1337
| ||||| ||||||||| |||||||||||| |||||||| |||| ||||||| | ||
Sbjct 1482 GCCAAGCTTTTAAGGATAGTCTGCGAGGAGGAGTACTCAATGCTCAAAACATAGATA-TT 1540
Query 1338 TCTTTTGAGAACTTTCCATATT-TCTTAAGTGGC-ACAACTAAGGATGTTTTGATGATAT 1395
|||||||||||||| ||||||| | |||||| || ||||| |||| ||||||||||||||
Sbjct 1541 TCTTTTGAGAACTTCCCATATTAT-TTAAGT-GCTACAACAAAGGGTGTTTTGATGATAT 1598
Query 1396 CAACATATGCCCATATGAA-GTATGGAAGGGAGTATGCGAAGTATGCATCAGATTTGCCA 1454
| | |||| |||||||| | |||||| ||||||| || | |||| |||| ||| |
Sbjct 1599 CGATGTATGTTCATATGAACG-GTGGAAGCAAGTATGCAAATTTTGCAACAGACTTGACT 1657
Query 1455 ACAGCGTGTCCCCGTATCTTACTCTCTGGACCATCTGGTTCTGAGATATATCAGGAAATG 1514
||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1658 ACAGCCTGTCCCCGTATCTTACTCTCTGGACCATCAGGCTCTGAGATATATCAGGAAATG 1717
Query 1515 TTAGCAAAAGCGCTTGCGAAAAAATTTGGGGCCAAATTGATGATTGTTGACTCTCTCTTG 1574
|| |||||||||||||| ||| | |||||||||||||||||||||||||| ||||| |||
Sbjct 1718 TTGGCAAAAGCGCTTGCTAAACAGTTTGGGGCCAAATTGATGATTGTTGATTCTCTTTTG 1777
Query 1575 TTACCTGGGGGATCAACACCCAAGGAAGCAG-ATTCTACCAAAGAAAGTTCTAGGCGTGA 1633
|| |||||||||||| || ||| |||||| | || || | |||||| |||||||||||||
Sbjct 1778 TTGCCTGGGGGATCACCAGCCAGGGAAGCTGAATCCT-CTAAAGAAGGTTCTAGGCGTGA 1836
Query 1634 AAGACTGTCTGTGCTTGCTAAACGAGCTGTACAGGCTGCACAAGCTGCTGTTTTGCAGCA 1693
||| |||||| ||||||||||| ||||||| |||||||||||| || ||||||||
Sbjct 1837 AAGGCTGTCTATGCTTGCTAAAAGAGCTGTTCAGGCTGCACAA------GTATTGCAGCA 1890
Query 1694 TAAGAAACCAATTTCAAGTGTTGAGGATGATATAACAGGTGGATCAACATTAAGCTCTCA 1753
||||||||| | |||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 1891 TAAGAAACCGACTTCAAGTGTTGATGCTGATATAACAGGTGGCTCAACATTAAGCTCTCA 1950
Query 1754 GGCTGTT-CCGAGGCAAGAAGTATCAACTGCAACCTCTAAAAGTTATACCTTTAAAGCAG 1812
|||| || || | |||||||| ||||| ||||| ||||||||||| || || |||||||
Sbjct 1951 GGCT-TTGCCAAAACAAGAAGTGTCAACAGCAACTTCTAAAAGTTACACATTCAAAGCAG 2009
Query 1813 GTGATAGAG-TAAGGTTTCTAGGCCCTTCAACTTCTTCTCTTGCTTCTCTTGCTTCTCTC 1871
|||| |||| ||| ||| |||| |||| | | | || ||| | || |||||||
Sbjct 2010 GTGACAGAGTTAA-ATTTGTAGGTCCTT---CGGC-T-TC-TGC-AAT-TT-CTTCTCTT 2059
Query 1872 CAAGCTCCA-CCTAGGGGACCGGCAACAGGTTTTCAGGGAAAAGTA-CTCCTTGCATTTG 1929
|||| ||| | |||||||||||| | |||| |||||||||||| | |||||||||||
Sbjct 2060 CAAG-GCCAGCTTAGGGGACCGGCCATTGGTTCCCAGGGAAAAGTAGC-CCTTGCATTTG 2117
Query 1930 AAGGCAA-TGGAT-CTTCAAAAATTGGGGTTAGATTTGATAGGTC-GATACCAGATGGCA 1986
||| ||| | | | |||||||||||||| ||||||| |||||| | | ||| ||||||||
Sbjct 2118 AAGACAACT-G-TGCTTCAAAAATTGGGATTAGATTCGATAGGCCTG-TACAAGATGGCA 2174
Query 1987 ATGATCTTGGTGGTCTATGCGAAGAAGACCA------------TGC-G--AGTTCTCTTC 2031
||||||||||||| || |||||||||||||| ||| | || || ||||
Sbjct 2175 ATGATCTTGGTGGCCTCTGCGAAGAAGACCATGGTTTTTTTTGTGCTGCTAGCTCACTTC 2234
Query 2032 GGTTAGAAAGTTCTTCCAGTGACGACGCTGATAAACTTGCCATTAATGAAATCTTTGAGG 2091
|||||||| ||||||| || || || ||||||||||| ||| ||||||||||||||||||
Sbjct 2235 GGTTAGAAGGTTCTTCTAGCGATGATGCTGATAAACTCGCCGTTAATGAAATCTTTGAGG 2294
Query 2092 TGGCTTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTCCTCAAAGACATTGAGAAAT 2151
| || ||| ||| |||||| |||||||||| |||||||| || ||||| ||||||||||
Sbjct 2295 TCGCACTTAGTGAGAGTGAAGGAGGGTCATTAATATTGTTTCTGAAAGATATTGAGAAAT 2354
Query 2152 CT-GTGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGCAAGCTTGAGAATTTACCC 2210
|| ||| |||||||| |||||||||| ||| ||||| ||||||||||||| ||||||
Sbjct 2355 CTCTTGT-GGGGAACAGTGATGTGTATGCAACCTTGAAAAGCAAGCTTGAGACTTTACCG 2413
Query 2211 GAGAATATTGTTGTCATAGCTTCACAAACCCAGTTGGACAGCCGAAAGGAAAAATCCCAC 2270
|| ||||| |||||||| || || || ||||||||||||||||||||||| ||||||||
Sbjct 2414 GAAAATATAGTTGTCATTGCCTCGCAGACCCAGTTGGACAGCCGAAAGGAGAAATCCCAT 2473
Query 2271 CCTGGAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACAGCACTACTGGATCTTGCA 2330
||||||||||||||||| || |||||||| |||| ||||| |||||||||||||| |||
Sbjct 2474 CCTGGAGGTTTCTTGTTTACTAAGTTTGGTGGCAATCAGACGGCACTACTGGATCTAGCA 2533
Query 2331 TTTCCGGATAATTTTGGTGGTAGACTGCAGGATAGGAA-CAAAGAAATGCCTAAATCAGT 2389
||||||||||| ||| ||||| |||||| |||| ||| |||||||| ||||||||| |
Sbjct 2534 TTTCCGGATAA-TTT--TGGTAAACTGCACGATA-GAAGCAAAGAAACACCTAAATCAAT 2589
Query 2390 GAAACAAATCACTAGGCTATTTCCAAACAAAGT-GACCATCCAGTTACCTGAGGATGAAG 2448
||||||||| ||| | |||||||| |||||| | | |||||||||||||| |||| ||||
Sbjct 2590 GAAACAAATAACTCGACTATTTCCTAACAAAATCG-CCATCCAGTTACCTCAGGAAGAAG 2648
Query 2449 CTTTGCTGGT-GGACTGGAAGGATAAACTTGAACGTGATACAGAGATCCTGAAGGCTCAA 2507
|||| || | ||| |||||||| |||||||| ||||| |||||||| |||||| |||
Sbjct 2649 CTTTACT-CTCGGATTGGAAGGAGAAACTTGACCGTGACACAGAGATTTTGAAGGTTCAG 2707
Query 2508 GCTAATATTACCAGCATCCGTGCGGTCCTTAG-CAAAAACCATCTAGTCTGCCCTGACCT 2566
|||||||| |||||||||| ||| |||| | | ||||||| | || | ||||||||||||
Sbjct 2708 GCTAATATAACCAGCATCCTTGCAGTCC-TCGCCAAAAACAAACTTGACTGCCCTGACCT 2766
Query 2567 TGAAACCTTGTGCATCAAAGACCAAACCCTTCCTTCTGATAGTGTGGAGAAAGTGGTTGG 2626
|| ||| |||||||||||||| ||||||||||| ||||| ||||| || |||||||||||
Sbjct 2767 TGGAACGTTGTGCATCAAAGATCAAACCCTTCCATCTGAAAGTGTTGAAAAAGTGGTTGG 2826
Query 2627 CTTTGCTTTCAATCACCATCTTATGA-ACTGCGCAGAACCTACAGTCAAGGACAACAAGC 2685
|| |||||| |||||||||||||| | ||| | ||||||| ||| || ||||||||||
Sbjct 2827 CTGGGCTTTCGGTCACCATCTTATGATA-TGCACTGAACCTATAGTTAAAGACAACAAGC 2885
Query 2686 TTATCATCTCGGCAGAAAGCATCACATATGGCCTGGAG-CTGTTGCATGGGATTCAAAAC 2744
|| | ||||| ||||| ||||| ||||||||||| || | |||||||| ||||| |||
Sbjct 2886 TTGTTATCTCTGCAGAGAGCATTTCATATGGCCTGCAGAC-GTTGCATGATATTCAGAAC 2944
Query 2745 GAAAACAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACTGAGAATGAATTCGAGAAA 2804
||||||||||| |||||| ||||| || ||||||||||||||||| ||||| ||||||
Sbjct 2945 GAAAACAAGAGTTTAAAGAAGTCTCTCAAGGATGTTGTTACTGAGAACGAATTTGAGAAA 3004
Query 2805 AAACTCCTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTT-CTTTCAGTGATATTGG 2863
||||| | || || |||||||| || || ||||| ||||||| |||| | |||||||||
Sbjct 3005 AAACTGTTGTCGGATGTCATTCCACCTAGCGATATAGGTGTTTCCTTTGA-TGATATTGG 3063
Query 2864 GGCTTTGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCTCTTCAAAGACC 2923
||| |||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 3064 AGCTCTGGAAAATGTGAAAGAAACGTTGAAGGAGTTGGTGATGCTTCCTCTTCAGAGACC 3123
Query 2924 CGAATTGTTTGGCAAAGGTCAACTTACAAAGCCTACTAAGGGTATACTGTTGTTTGGACC 2983
|||||||||| |||||| || || ||||||||||| || ||||||||||||||||||||
Sbjct 3124 GGAATTGTTTGACAAAGGCCAGCTCACAAAGCCTACGAAAGGTATACTGTTGTTTGGACC 3183
Query 2984 GCCTGGTACGGGGAAGACAATGTTGGCAAAAGCTGTAGCAACTGAGGCTGGGGCAAACTT 3043
|||||||| || ||||| ||| |||||||||| ||||||||||||||||| ||||| ||
Sbjct 3184 TCCTGGTACTGGAAAGACGATGCTGGCAAAAGCAGTAGCAACTGAGGCTGGCGCAAA-TT 3242
Query 3044 T-ATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGAGAGAAGTACG 3102
| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3243 TCATCAATATCTCAATGTCCAGCATTACTTCGAAGTGGTTTGGTGAGGGAGAGAAGTACG 3302
Query 3103 TTAAAGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTTGTTGATGAGG 3162
|||||||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||
Sbjct 3303 TTAAAGCTGTCTTCTCCTTAGCGAGCAAGATTGCGCCAAGTGTCATTTTTGTTGATGAGG 3362
Query 3163 TTGATAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATGCGTAAGATGA 3222
||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct 3363 TTGATAGCATGTTGGGTAGACGTGAAAATCCAGGGGAACATGAAGCTATGCGTAAGATGA 3422
Query 3223 AGAACGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAAAGAGTTTTAG 3282
||||||| |||||| |||||||||| || ||| | |||||||||| |||| | ||| | |
Sbjct 3423 AGAACGAGTTCATGGTAAACTGGGATGGTTTAAGAACAAAGGATAGAGAACGGGTTCTGG 3482
Query 3283 TATTGGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGACGGCTTCCCC 3342
|| | ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct 3483 TACTCGCTGCCACCAACAGACCATTTGACCTAGACGAAGCTGTTATTAGACGGCTTCCCC 3542
Query 3343 GAAGGTTGATGGTTAATCTACCGGATTCAGCAAACAGATCGAAGATCTTGAGCGTAATTT 3402
| || |||||||||||||| || ||| || | |||||||| |||||||||||||| |||
Sbjct 3543 GGAGATTGATGGTTAATCTTCCAGATGCAACGAACAGATCAAAGATCTTGAGCGTTATTC 3602
Query 3403 TGGCGAAAGAAGAGATGGCAGAAGACGTAGATTTAGAAGCAATAGCAAATATGACAGATG 3462
| || |||||||| || ||| |||||| ||||||||||| |||||||||||||||||||
Sbjct 3603 TAGCAAAAGAAGAAATAGCACCAGACGTCGATTTAGAAGCTATAGCAAATATGACAGATG 3662
Query 3463 GGTACTCAGGGAGTGATTTAAAGAATCTTTGCGTGACCGCGGCACATCTTCCTATCCGAG 3522
|||||||||| ||||| ||||||||||| || |||||||| |||||| |||| |||||||
Sbjct 3663 GGTACTCAGGAAGTGACTTAAAGAATCTGTGTGTGACCGCAGCACATTTTCCAATCCGAG 3722
Query 3523 AGATTCTGGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAATCCGAAAACCGACCAACGC 3582
| || ||||| |||||||||||||||| || || ||||| | || ||||| || || |
Sbjct 3723 AAATACTGGAGAAAGAAAAGAAGGAGAAAACTGCAGCTCAGGCTGAGAACCGTCCCACAC 3782
Query 3583 CAC-AGTTATATAGCAGTAGAGACATTAGA-CCCTTGAACA-TGAATGATTTCAAGGCCG 3639
| | | || |||||| | | ||| || | |||| || || |||| ||||||||||| |
Sbjct 3783 CGCCA-TTGTATAGCTGCACAGATGTTCGTTCCCT-GA-CAATGAACGATTTCAAGGCTG 3839
Query 3640 CACATGATCAGGTATGTGCGAGTGTGTCGTCTGATTCATCGAACATGAATGAGCTCCAGC 3699
| |||||||||||||| || |||||||| || || || ||||||||||| || || ||||
Sbjct 3840 CCCATGATCAGGTATGCGCAAGTGTGTCTTCAGACTCGTCGAACATGAACGAACTTCAGC 3899
Query 3700 AATGGAACGAGCTCTACGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGCTACTTCA 3759
||||||||||||| || || |||||||| |||||||||||||| || ||||||||||||
Sbjct 3900 AATGGAACGAGCTGTATGGTGAAGGAGGATCGAGGAAGAAGACGTCGTTGAGCTACTTCA 3959
Query 3760 TGTA-AAGAGA-A-AACAGAGAG 3779
|||| |||||| | || ||||||
Sbjct 3960 TGTAGAAGAGAGACAAAAGAGAG 3982
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 197758089306
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5