BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470323 Length=1099 Score E Sequences producing significant alignments: (Bits) Value AT1G03470.1 | Symbols: | Kinase interacting (KIP1-like) family... 1291 0.0 > AT1G03470.1 | Symbols: | Kinase interacting (KIP1-like) family protein | chr1:865915-867733 REVERSE LENGTH=1247 Length=1247 Score = 1291 bits (699), Expect = 0.0 Identities = 922/1024 (90%), Gaps = 37/1024 (4%) Strand=Plus/Plus Query 27 agaagaagaagaagagagaaACGGCGCCGtttatttattttttgtattttactgtttt-- 84 ||||||||||||||| ||||||||||||||||||||| || | ||| || ||||| Sbjct 40 AGAAGAAGAAGAAGA-AGAAACGGCGCCGTTTATTTA--TTGTCTATCTT--GGTTTTCC 94 Query 85 gtg-ttttttG-AGTGGAGAAAGCTTTAAGAAGAGTGAAAGATGGTGATGGACTCATCAA 142 | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 ACGCACCGAGGTTGTGGAGAAAGCTTTAAGAAGAGTGAAAGATGGTGATGGACTCATCAA 154 Query 143 AATGGTGGTGGATTGGGAATCACAACACCACAAATTTCTCTCCTTGGCTTCATTCTACTC 202 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct 155 AATGGTGGTGGATTGGAAATCACAACACTACTAATTTCTCTCCTTGGCTTCATTCTACTC 214 Query 203 TCTCTGAATTGGATGAAAAGACAAAAGAAATGCTGAGAGTGATTGATGAGGATGCTGATT 262 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 215 TCTCTGAATTGGATGAAAAGACAAAGGAAATGCTGAGAGTGATTGATGAGGATGCTGATT 274 Query 263 CTTTCGCCGCACGAGCTGAGATGTATTATAAGAAAAGGCCTGAGCTTATAGCTATGGTCG 322 |||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||| | Sbjct 275 CTTTTGCGGCACGAGCTGAGATGTATTACAAGAAAAGGCCCGAGCTTATAGCTATGGTGG 334 Query 323 AAGAGTTCTACCGTTCACATCGCTCCTTGGCCGAGAGGTACGACTTGTTGAGACCCTCTT 382 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 335 AAGAATTCTACCGTTCACATCGCTCCTTGGCCGAGAGGTACGACTTGTTGAGACCCTCTT 394 Query 383 CTGTGCACAAACATGGCTC--A----GAGAGTCATGGGAAATCATCAACTTGTGATGAGT 436 ||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||| Sbjct 395 CTGTGCATAAACATGGCTCAGACTCGGAGAGTCATGAGAAATCATCAACTTGTGATGAGT 454 Query 437 CTTCTTGGTCTGAGGCTTGTGAGACTCATGAAGAGTATGCGGAGTCTGAAATAGATAACG 496 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 455 CTTCTTGGTCTGAGGCTTGTGAGACTCATGAGGAGTATGCGGAGTCTGAAATAGATAACG 514 Query 497 GTGAAAGCAAATGGGTCGATGAAGGTGAAATCAATGGCATTGTCGAGGAAATGGAATCAT 556 ||||||||||||||||||||||| ||||||| |||||||||| |||||||| ||| ||| Sbjct 515 GTGAAAGCAAATGGGTCGATGAAAGTGAAATTGATGGCATTGTTGAGGAAATAGAACCAT 574 Query 557 CGCAAGTCGAATACGGTGAAGCTAATGGAAATTATGAGATGATGAAGGA-AGAGCTAGAA 615 || |||||| ||| |||||| ||||||||||| |||||||||||| || |||| |||| Sbjct 575 CGGAAGTCGTTTACAGTGAAGGTAATGGAAATTCTGAGATGATGAA-GATAGAGATAGAG 633 Query 616 AGGCtgagagaggagaataaggtttacagtgaaatggtgagagaaaaagatgaagagaag 675 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 634 AGGCTGAGAGAGGAGAATAAGGTTTACAGTGAAATGGTGAGAGAGAAAGATGAAGAGAAG 693 Query 676 agagaagCTATAAGGCAAATGAGTGTAGCAATACAAATGCTTAAAGAAGAGAACTCAGAG 735 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 694 AGAGAAGCTATAAGGCAAATGAGTGTAGCAATACAAATGCTTAAAGAAGAGAACTCAGAG 753 Query 736 CTAAAGCAACGTGTTAC---TACTGTTGTTGCAAGGCGTAACAAGGTAGGTGGTGATTCT 792 || ||| |||||||||| ||||||||||||||||||||| |||| ||||||||||||| Sbjct 754 CTTAAGAAACGTGTTACCAATACTGTTGTTGCAAGGCGTAATAAGGAAGGTGGTGATTCT 813 Query 793 CAGAGGAAGC--CA--T-T--------T--GAGTTTAAGAAGATTAATCTTCAAGGGTTT 837 |||||||||| || | | | ||||||||||||||||| ||| ||||||| Sbjct 814 CAGAGGAAGCAACAGATGTGGAAGCCATTTGAGTTTAAGAAGATTAAGCTTGAAGGGTTA 873 Query 838 TGGGGGAAAGTAGTAGGAAATTGGG-TCCTCCCAAACACAGATTCTGCTTCTAGAGAGCT 896 |||||||||| | || ||||||| || ||||||||||||||||| |||| | |||||| Sbjct 874 TGGGGGAAAGGCTTTGGCAATTGGGCTC-TCCCAAACACAGATTCTACTTCCAAAGAGCT 932 Query 897 CATGACTCTTTAGAGAAAACAGAGAGGTCTGAGTGATCAAGAACAGAAACTGAGGAACTT 956 ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct 933 CATGACTCTTTAGAGGAGACAGAGAGGTCCGAGTGATCAAGAACAGAAACTGAGGAACTT 992 Query 957 TCTCTAAACATCTTTGTACTCTGTGACAAGTAGGGTATACTCTCAAGTGGTTAGTGTAAG 1016 |||||||| ||||||||||||||||| | ||||||||||||||||| | ||||| ||||| Sbjct 993 TCTCTAAATATCTTTGTACTCTGTGATAGGTAGGGTATACTCTCAACTAGTTAGCGTAAG 1052 Query 1017 GTAT 1020 |||| Sbjct 1053 GTAT 1056 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53865184785 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5