BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470361 Length=1205 Score E Sequences producing significant alignments: (Bits) Value AT1G03860.1 | Symbols: ATPHB2, PHB2 | prohibitin 2 | chr1:97930... 1781 0.0 AT2G20530.1 | Symbols: ATPHB6, PHB6 | prohibitin 6 | chr2:88419... 472 5e-132 > AT1G03860.1 | Symbols: ATPHB2, PHB2 | prohibitin 2 | chr1:979308-981885 REVERSE LENGTH=1280 Length=1280 Score = 1781 bits (964), Expect = 0.0 Identities = 1153/1237 (93%), Gaps = 41/1237 (3%) Strand=Plus/Plus Query 2 TTTCTCATTTCTAAAACCCTAAGCTTCGCCGGCAGCTCCGATCGTGATCTTTCATAAACC 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 21 TTTCTCATTTCTAAAACCCTAAGCTTCGCCGGCAGCTCCGATCGTGATCTTTCATAAATC 80 Query 62 CTACCATCGCCGGT-GATTAAGAGCTGAGCTCAGGAAATGAGTTTCAACAAAGTTCCCAA 120 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 81 CTACCATCGCC-GTCGATTAAGAGCTGAGCTCAGGAAATGAGTTTCAACAAAGTTCCCAA 139 Query 121 CATTCCTGGATCTCCTGCTCTCTCTGCCCTTCTTAAGGTCAGTGTTATTGGTGGCCTTGG 180 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || || Sbjct 140 CATTCCTGGAGCTCCTGCTCTCTCTGCCCTTCTTAAGGTCAGCGTTATTGGTGGGCTCGG 199 Query 181 TGTCTATGCCCTTACTAATAGTCTCTACAATGTCGATGGAGGACACCGTGCTGTCATGTT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 TGTCTATGCCCTTACTAATAGTCTCTACAATGTCGATGGAGGACACCGTGCTGTCATGTT 259 Query 241 CAACCGATTAACTGGTATCAAGGAAAAGGTATACCCAGAGGGCACACATTTTATGATGCC 300 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| Sbjct 260 CAACCGATTAACTGGTATCAAGGAAAAGGTGTACCCAGAAGGCACACATTTTATGGTGCC 319 Query 301 ATGGTTTGAAAGGCCAATCATCTATGACGTTCGTGCACGACCTTATCTTGTAGAGAGCAC 360 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 320 ATGGTTTGAAAGGCCAATCATCTATGACGTTCGTGCACGACCTTACCTTGTAGAGAGCAC 379 Query 361 CACCGGTAGTCATGACCTTCAGATGGTGAAAATTGGACTAAGGGTTCTCACACGTCCCAT 420 ||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 380 CACTGGTAGTCATGATCTTCAGATGGTGAAAATTGGATTAAGGGTTCTCACACGTCCCAT 439 Query 421 GGGTGATCGTTTGCCTCAGATTTACCGAACCCTCGGCGAGAACTACAGTGAAAGGGTTCT 480 |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 440 GGGTGACCGTTTGCCTCAGATTTACCGAACCCTTGGCGAGAACTACAGCGAAAGGGTTCT 499 Query 481 ACCTTCCATCATCCATGAAACCCTAAAAGCCGTGGTAGCTCAGTACAATGCAAGCCAGCT 540 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 500 TCCTTCCATCATCCATGAAACCCTAAAAGCAGTGGTAGCTCAGTACAATGCAAGCCAGCT 559 Query 541 CATTACACAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATTCTGACAGAGCGGGCTTC 600 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 560 CATTACCCAGAGAGAAGCTGTGAGCAGAGAGATACGCAAGATTCTGACAGAGCGGGCTTC 619 Query 601 TAACTTTGACATTGCTCTTGATGATGTCTCCATCACGACTCTCACATTCGGCAAAGAGTT 660 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 620 TAACTTTGACATTGCTCTTGATGATGTCTCCATCACGACTCTGACATTCGGCAAAGAGTT 679 Query 661 CACCGCAGCAATCGAGGCAAAACAAGTCGCTGCTCAGGAAGCTGAAAGGGCTAAGTTCAT 720 ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct 680 CACCGCAGCTATCGAGGCAAAACAAGTTGCTGCTCAGGAAGCTGAACGGGCTAAGTTCAT 739 Query 721 TGTGGAGAAAGCCGAGCAAGACAGGAGAAGTGCGGTTATCCGTGCACAGGGAGAAGCTAA 780 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 740 TGTGGAGAAAGCCGAACAAGACAGGAGAAGTGCGGTTATCCGTGCGCAGGGAGAAGCTAA 799 Query 781 AAGTGCTCAGCTTATCGGACAAGCAATTGCGAATAATCAGGCATTCATCACTCTGAGAAA 840 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 800 AAGTGCTCAGCTTATCGGACAAGCAATTGCGAACAATCAGGCATTCATCACTCTGAGAAA 859 Query 841 GATTGAAGCGGCGAGAGAGATTGCTCAGACCATTGCACTATCTGCTAACAAAGTTTACCT 900 ||||||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct 860 GATTGAAGCTGCGAGAGAGATTGCACAGACCATTGCACAATCTGCTAACAAGGTTTACCT 919 Query 901 GAGCTCCAACGATCTGTTGCTTAACCTTCAAGAAATGAACTTGGAGCCTAACCCTAAGAA 960 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 920 GAGCTCCAACGATCTGTTGCTTAACCTTCAAGAAATGAACTTGGAGCCTAA------GAA 973 Query 961 GTAAAAGAGAAGGAACGAGTAAGTTT-T--A----A-A---A----A---A-----TCTC 997 |||||||||||||||||||||||||| | | | | | | | |||| Sbjct 974 GTAAAAGAGAAGGAACGAGTAAGTTTCTTCATTTCATATTCATTTCATTTAAAAGATCTC 1033 Query 998 TCCGCCTTGGAAGTAAAGAACGGGTTCGGTGTTTGACCAAATGACCCCTTCTCGTGACTG 1057 |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||| Sbjct 1034 TCCGCCTTGGAAGTAAAGGATGGGTT-GGTGTTTGACCAAATGACCCTTTCTCGTGACTG 1092 Query 1058 ATTCTGAAAATAGTCTTTAAGCGGACATATTGCGA----CTCAGATTGGCTTTGGTCAGT 1113 ||||||||||||||||||||| |||||||||| || | ||||||||||||||||||| Sbjct 1093 ATTCTGAAAATAGTCTTTAAGAGGACATATTGAGAGAGACGCAGATTGGCTTTGGTCAGT 1152 Query 1114 ATTATTCATCATGTTCAATGAAACTTTTTGTTGATATTCAACT-T-T--CCT-GGAAAAT 1168 |||||||||||| ||||||||||||||||||||||||| || | | || ||| ||| Sbjct 1153 ATTATTCATCATTTTCAATGAAACTTTTTGTTGATATTTTCCTGTGTTTCCCCGGACAAT 1212 Query 1169 TGATGAAGTTGAATTTTAAACTTAATAATATTCATAT 1205 |||||||||||||||| ||||| |||||||||||||| Sbjct 1213 TGATGAAGTTGAATTTAAAACTCAATAATATTCATAT 1249 > AT2G20530.1 | Symbols: ATPHB6, PHB6 | prohibitin 6 | chr2:8841972-8844000 FORWARD LENGTH=1165 Length=1165 Score = 472 bits (255), Expect = 5e-132 Identities = 585/742 (79%), Gaps = 32/742 (4%) Strand=Plus/Plus Query 202 TCTCTACAATGTCGATGGAGGACACCGTG-C--TGTCATGTTCAACC-GATTAACTGGTA 257 ||||||||||||||||||||| || || | | |||| | || |||| | || ||||| Sbjct 190 TCTCTACAATGTCGATGGAGGTCATCGAGCCATTGTC-T-TT-AACCGGCTT-GTTGGTA 245 Query 258 TCAAGGAAAAGGTATACCCAGAGGGCACACATTTTATGATGCCATGGTTTGAAAGGCCAA 317 |||| || ||||| ||||| ||||| || || ||||||| |||||||| |||||||||| Sbjct 246 TCAAAGACAAGGTCTACCCTGAGGGTACTCACCTTATGATTCCATGGTTCGAAAGGCCAA 305 Query 318 TCATCTATGACGTTCGTGCAC-GACCTTATCTTGTAGAGAGCACCACC-GGTAGTCATGA 375 |||||||||||||||||||| | |||||||| || |||||||| | | || || | ||| Sbjct 306 TCATCTATGACGTTCGTGCAAAG-CCTTATCTAGTTGAGAGCAC-ATCTGGGAGCCGTGA 363 Query 376 CCTTCAGATGGTGAAAATTGGACTAAGGGTTCTCACACGTCCCATGGGTGATCGTTTGCC 435 || |||||||| || ||||| || |||||||||| ||||| |||| ||| | || || Sbjct 364 TCTCCAGATGGTTAAGATTGGGCTTCGGGTTCTCACCCGTCCTATGGCTGACCAATTACC 423 Query 436 TCAGATTTACCGAACCCTCGGCGAGAACTACAGTGAAAGGGTTCTA-CCTTCCATCATCC 494 || | ||||| |||| || ||||| ||| | || || || || ||||| ||||||| Sbjct 424 AGAGGTATACCGGTCCCTTGGTGAGAATTACCGCGAGAGAGT-CTTGCCTTCTATCATCC 482 Query 495 ATGAAACCCTAAAAGCCGTGGTAGCTCAGTACAATGCAAGCCAGCTCATTACACAGAGAG 554 | || ||| | ||||| ||||| ||||||||||| |||||||| || ||||| ||||||| Sbjct 483 ACGAGACCTTGAAAGCTGTGGTTGCTCAGTACAACGCAAGCCAACTTATTACTCAGAGAG 542 Query 555 AAG-CTGTGAGCAGAGAGAT-ACGCAAGATTCTGACAG-AGCGGGCTTCTAACTTTGACA 611 | | | ||||| ||||| || | | || || || || | | || | ||||| ||| Sbjct 543 A-GTCGGTGAGTAGAGAAATCAGGAAA-ATCCTAACTCTAA-GAGCCGCAAACTTCCACA 599 Query 612 TTGCTCTTGATGATGTCTCCATCAC-GACTCTCACATTCGGCAAAG-AGTTCACCGCAGC 669 |||| || |||||||| |||||||| | || | |||||||| |||| ||||||| ||||| Sbjct 600 TTGCACTGGATGATGTGTCCATCACAGGCT-TGACATTCGG-AAAGGAGTTCACGGCAGC 657 Query 670 AATCGA-GGCAAAACAAGTCGCTGCTCAGGAAGCTGAAAGGGCTAAGTTCATTGTGGAGA 728 || || || ||| || ||||||||||| || || ||| |||||||||||||||| |||| Sbjct 658 CATAGAAGG-AAAGCAGGTCGCTGCTCAAGAGGCCGAACGGGCTAAGTTCATTGTCGAGA 716 Query 729 AAGCCGAGCAAGACAGGAGAAGTGCGGTTATCCGTGCAC-AGGGAGAAGCTAAAAGTGCT 787 |||| || || |||| ||||||||| |||||||| || | |||||||||| || |||||| Sbjct 717 AAGCTGAACAGGACAAGAGAAGTGCTGTTATCCGCGC-CGAGGGAGAAGCCAAGAGTGCT 775 Query 788 CAGCTTATCGGACAAGCAATTGCGAATAATCAGGCATTCATCACTCTGAGAAAGATTGAA 847 ||||| || || |||||||| || || || || || ||| | || ||||| ||||| ||| Sbjct 776 CAGCTCATTGGTCAAGCAATCGCAAACAACCAAGCGTTCTTAACACTGAGGAAGATCGAA 835 Query 848 GCGGCGAGAGAGATTGCTCAGACCATTGCACTA--TCTGCTAACAAAGTTTACCTGAGCT 905 || || |||||||| || |||||||| | ||| || || ||||| |||||| |||||| Sbjct 836 GCAGCTAGAGAGATCGCACAGACCAT--CTCTAGGTCGGCGAACAAGGTTTACTTGAGCT 893 Query 906 CCAACGATCTGTTGCTTAACCT 927 | |||||||||||||||||||| Sbjct 894 CTAACGATCTGTTGCTTAACCT 915 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59186442555 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5