BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470387 Length=2337 Score E Sequences producing significant alignments: (Bits) Value AT1G04110.1 | Symbols: SDD1 | Subtilase family protein | chr1:1... 3842 0.0 > AT1G04110.1 | Symbols: SDD1 | Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=2328 Length=2328 Score = 3842 bits (2080), Expect = 0.0 Identities = 2259/2343 (96%), Gaps = 21/2343 (1%) Strand=Plus/Plus Query 1 ATGGAACCCAAATCC-TTCCTACTCTGCATTAtctttcttctcttctcttcttcttcttc 59 |||||||||||| || ||| | |||||||||| |||| || | || | || || ||| Sbjct 1 ATGGAACCCAAA-CCTTTCTTTCTCTGCATTA----TCTT-TC-T-TC-TATT-TTGTTC 50 Query 60 ttcttcCTCAGAAATCCTGCAGAAACAGACTTACATTGTTCAGCTTCATCCTAATACCGA 119 |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 51 TTCTTCGTCAGAGATCCTGCAGAAGCAGACTTACATTGTTCAGCTTCATCCTAATAGCGA 110 Query 120 AACCGCTAAAACATTTGCCTCAAAGTTTGATTGGCATCTTTCTTTTCTCCAAGAAGCGGT 179 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 111 AACCGCTAAAACCTTTGCCTCAAAGTTTGATTGGCATCTTTCTTTTCTCCAAGAAGCGGT 170 Query 180 TTTGGGTGTTGAAGAAGAAGAGGAAGAGCCTTCTTCACGACTTCTCTACTCCTATGGCTC 239 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 171 TTTAGGTGTTGAAGAAGAAGAGGAAGAGCCTTCTTCTCGACTTCTCTACTCCTATGGCTC 230 Query 240 TGCGATTGAAGGATTTGCTGCTCAGTTGACTGAGTCAGAAGCCCAGATGCTGAGATATTC 299 ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| Sbjct 231 TGCGATTGAAGGATTTGCTGCTCAGTTGACTGAATCAGAAGCCGAGATACTGAGATATTC 290 Query 300 ACCTGAAGTTGTTGCAGTGAGACCTGACCATGTTCTTCAAGTTCAAACCACTTACTCTTA 359 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 291 ACCTGAAGTTGTTGCAGTGAGACCTGACCATGTTCTTCAGGTTCAAACCACTTACTCTTA 350 Query 360 CAAGTTCTTGGGACTCGACGGTTTTGGAAACT-CGAGTGTATGGTCTAAATCTCGGTTTG 418 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 351 CAAGTTCTTGGGACTCGACGGTTTTGGAAACTCCG-GTGTATGGTCTAAATCTCGGTTTG 409 Query 419 GTCAAGGCACAATTATCGGCGTGCTTGATACTGGAGTTTGGCCTGAAAGTCCTAGCTTTG 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 410 GTCAAGGCACAATTATCGGCGTGCTTGATACTGGAGTTTGGCCTGAAAGTCCTAGCTTTG 469 Query 479 ACGATACCGGAATGCCTTCGATTCCACGGAAATGGAAAGGGATTTGCCAAGAAGGAGAGA 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 470 ACGATACCGGAATGCCTTCGATTCCACGGAAATGGAAAGGGATTTGCCAAGAAGGAGA-A 528 Query 539 A-TTTCAGTTCCTCGAGCTGTAACCGGAAGCTAATCGGTGCTAGATTCTTCATCAGAGGA 597 | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 529 AGTTTCAGTTCTTCGAGCTGTAACCGGAAGCTAATCGGTGCTAGATTCTTCATCAGAGGA 588 Query 598 CACCGTGTCGCTAATTCACCAGAGGAATCACCAAACATGCCCCGTGAATACATTTCCGCA 657 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 589 CACCGTGTCGCTAATTCACCAGAGGAATCACCAAACATGCCTCGTGAATACATTTCCGCA 648 Query 658 AGAGATTCAACGGGACACGGGACTCATACCGCTTCAACAGTTGGTGGATCCTCTGTTTCG 717 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 649 AGAGATTCAACGGGACACGGGACTCACACCGCCTCAACAGTTGGTGGATCCTCTGTTTCG 708 Query 718 ATGGCGAATGTTCTTGGCAATGGAGCTGGTGTGGCTCGTGGGATGGCTCCTGGAGCTCAC 777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 ATGGCGAATGTTCTTGGCAATGGAGCTGGTGTGGCTCGTGGGATGGCTCCTGGAGCTCAC 768 Query 778 ATTGCAGTCTATAAAGTCTGTTGGTTCAATGGTTGTTACAGCTCTGACATTCTAGCAGCT 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 ATTGCAGTCTATAAAGTCTGTTGGTTCAATGGTTGTTACAGCTCTGACATTCTAGCAGCT 828 Query 838 ATAGATGTAGCGATTCAAGATAAAGTCGACGTTCTTTCTCTTTCCCTTGGCGGTTTCCCG 897 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 829 ATAGATGTAGCGATTCAAGATAAAGTCGATGTTCTTTCGCTTTCCCTTGGCGGTTTCCCT 888 Query 898 ATTCCTTTGTATGATGACACAATCGCCATTGGAACATTCCGAGCCATGGAACGTGGTATA 957 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 889 ATTCCTTTGTATGATGACACAATCGCCATTGGAACATTCCGAGCCATGGAACGCGGTATA 948 Query 958 TCTGTAATATGTGCAGCTGGTAACAACGGTCCAATCGAAAGCTCTGTTGCAAACACAGCT 1017 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 949 TCTGTAATCTGTGCAGCTGGTAACAACGGTCCAATCGAAAGCTCTGTTGCAAACACAGCT 1008 Query 1018 CCTTGGGTCTCAACCATTGGCGCAGGCACGCTTGATCGAAGATTTCCCGCTGTGGTCCGA 1077 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1009 CCTTGGGTCTCAACCATTGGCGCAGGCACGCTTGATCGAAGATTTCCCGCTGTGGTCAGA 1068 Query 1078 TTAGCCAACGGAAAGCTTCTGTATGGAGAGTCGTTGTATCCCGGG-AAAGGTTTAAAGAA 1136 |||||||||||||||||||| ||||||||||| |||||| ||||| |||||| ||||||| Sbjct 1069 TTAGCCAACGGAAAGCTTCTCTATGGAGAGTCATTGTAT-CCGGGAAAAGGTATAAAGAA 1127 Query 1137 TGCTGAGAGAGAGGTTGAGGTGATTTACGTCACAGGAGGAGATAAAGGAAGTGAGTTCTG 1196 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1128 TGCCGGGAGAGAGGTTGAGGTGATTTACGTCACAGGAGGAGATAAAGGAAGTGAGTTCTG 1187 Query 1197 TTTGAGAGGGTCACTTCCAAGAGAGGAAATCCGAGGCAAAATGGTTATTTGTGATCGCGG 1256 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1188 TTTGAGAGGGTCACTTCCAAGAGAAGAAATCCGAGGCAAAATGGTGATTTGTGATCGCGG 1247 Query 1257 CGTCAATGGAAGATCTGAGAAAGGAGAAGCGATTAAAGAAGCAGGAGGAGTTGCAATGAT 1316 |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 1248 AGTCAATGGAAGATCGGAGAAAGGAGAAGCGGTTAAAGAAGCTGGAGGAGTTGCAATGAT 1307 Query 1317 CTTAGCCAACACAGAGATCAACCAAGAAGAAGATTCTATTGACGTTCATCTCTTACCAGC 1376 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1308 CTTAGCCAATACAGAGATCAACCAAGAAGAAGATTCTATTGACGTTCATCTCTTACCAGC 1367 Query 1377 TACATTGATTGGTTACACCGAGTCAGTCCTTCTGAAAGCTTATGTTAATGCCACGGTGAA 1436 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1368 TACATTGATTGGTTACACTGAGTCAGTCCTTCTGAAGGCTTATGTTAATGCCACGGTGAA 1427 Query 1437 ACCAAAGGCGCGGATAATTTTTGGTGGTACAGTGATTGGGCGGTCACGAGCACCGGAAGT 1496 |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| || Sbjct 1428 ACCAAAGGCGCGGATAATTTTTGGTGGTACGGTGATTGGGAGGTCACGAGCACCGGAGGT 1487 Query 1497 GGCTCAGTTTTCAGCTCGAGGACCGAGTTTAGCCAATCCTTCGATACTAAAACCGGATAT 1556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1488 GGCTCAGTTTTCAGCTCGAGGACCGAGTTTAGCCAATCCTTCGATACTAAAACCGGATAT 1547 Query 1557 GATTGCTCCGGGAGTCAATATCATTGCGGCTTGGCCTCAAAATCTAGGACCAACCGGACT 1616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1548 GATTGCTCCGGGAGTCAATATCATTGCGGCTTGGCCTCAAAATCTAGGACCAACCGGACT 1607 Query 1617 TCCTTATGATTCAAGAAGAGTTAACTTCACTGTAATGTCAGGAACTTCAATGTCTTGTCC 1676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1608 TCCTTATGATTCAAGAAGAGTTAACTTCACTGTAATGTCAGGAACTTCAATGTCTTGTCC 1667 Query 1677 ACATGTTAGCGGAATCACTGCTCTTATCCGGTCTGCATACCCGAACTGGTCTCCCGCTGC 1736 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1668 ACATGTTAGCGGAATCACTGCTCTTATCCGGTCTGCATACCCGAACTGGTCTCCAGCTGC 1727 Query 1737 AATCAAATCCGCATTGATGACAACAGCGGATTTGTATGATCGTCAAGGGAAAGCGATAAA 1796 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1728 AATCAAATCCGCATTGATGACAACAGCGGATTTGTACGATCGTCAAGGGAAAGCGATAAA 1787 Query 1797 GGATGGTAACAAACCAGCAGGTGTGTTTGCGATTGGAGCAGGGCATGTGAATCCGCAAAA 1856 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1788 GGATGGTAACAAACCAGCCGGTGTGTTTGCGATTGGAGCAGGGCATGTGAATCCGCAAAA 1847 Query 1857 GGCGATAAACCCGGGATTGGTTTACAACATTCAACCAGTGGATTACATTACTTACCTCTG 1916 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1848 GGCGATAAACCCGGGATTGGTTTACAACATTCAACCAGTGGATTACATAACTTACCTCTG 1907 Query 1917 CACTCTTGGATTCACAAGATCAGACATTTTAGCAATCACTCATAAGAACGTGAGCTGCAG 1976 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1908 CACTCTTGGATTCACAAGATCAGATATTTTAGCAATCACTCATAAGAACGTGAGCTGCAA 1967 Query 1977 CGGAATATTGCGGAAAAACCCGGGTTTTAGCCTCAATTACCCGTCGATATCCGTGATTTT 2036 ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 1968 TGGAATATTGCGGAAAAACCCGGGTTTTAGTCTCAATTACCCGTCGATAGCCGTGATTTT 2027 Query 2037 CAAACGTGGCAAGACTACAGAGATGATCACAAGGCGTGTGACTAACGTTGGGAGTCCAAA 2096 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct 2028 CAAACGTGGCAAGACTACGGAGATGATCACAAGGCGTGTCACTAACGTTGGGAGTCCTAA 2087 Query 2097 CTCGATATACTCAGTGAATGTTGAGGCTCCAGAAGGGATCAAAGTGATTGTAAATCCTAA 2156 ||||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||| Sbjct 2088 CTCGATATACTCAGTGAATGTCAAGGCTCCAGAGGGGATCAAAGTTATTGTCAATCCTAA 2147 Query 2157 GAGACTTGTATTCAAACACGTGGATCAGACGCTGAGCTATCGAGTATGGTTTGTATTGAA 2216 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2148 GAGACTTGTGTTCAAACACGTGGATCAGACGCTGAGCTATAGAGTATGGTTTGTATTGAA 2207 Query 2217 GAAGAAAAACAGAGGAGGGAGGGTGGCTA-CGTTTGCACA-GGGACAGTTGACTTGGGTC 2274 |||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||| Sbjct 2208 GAAGAAAAACAGAGGAGGGAAGGTGGCTAGC-TTTGCACAAGGG-CAGTTGACTTGGGTC 2265 Query 2275 AACTCTCAGAATCTGATGCAGCGAGTTAGAAGTCCAATCTCTGTAACCTTGAAGACTAAC 2334 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2266 AACTCTCATAATCTGATGCAGCGAGTTAGAAGTCCAATCTCTGTAACCTTGAAGACTAAC 2325 Query 2335 TGA 2337 ||| Sbjct 2326 TGA 2328 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 116013459495 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5