BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470391
Length=3064
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04140.2 | Symbols: | Transducin family protein / WD-40 rep... 4645 0.0
AT5G43930.4 | Symbols: | Transducin family protein / WD-40 rep... 1007 0.0
> AT1G04140.2 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr1:1075545-1080630 REVERSE LENGTH=3138
Length=3138
Score = 4645 bits (2515), Expect = 0.0
Identities = 2935/3127 (94%), Gaps = 72/3127 (2%)
Strand=Plus/Plus
Query 1 TTAGATAATGAAGAACAGGGCATTT-CAATTAGAGAGaaaaaaaGGAGATCCTTTTTAAT 59
||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 16 TTAGATAATCAAGAACAGGGCATTTCCAATTAGAGAGAAAAAAAGGAGATCC-TTTTAAT 74
Query 60 GTATCGCAGACCATCCTCAGCTATGTCCTCCTGTTTTTCCTTTTAGGTTTCTTCGTCGTT 119
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | |
Sbjct 75 GTATCGCAGACCATCCTCAGCTATGGCCTCCTGTTTTTCCTTTTAGGTATCTTCGTAGCT 134
Query 120 CTTCACCGTAAATAGTCCCTGACCCATCTAGAGGACGGAGCCGCCGGCGAGGAAATTCGG 179
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 135 CTTCACCGTAAATAATCCC-GACCCATCTAGAGGACGGAGCCGCCGGCGAGGAAATTCAG 193
Query 180 GCAGATTAGATCGGCGATTTGGCCTTGTTTTCAACGAAGATCGTCTTGTTAGGGTTTCGT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 GCAGATTAGATCGGCGATTTGGCCTTGTTTTCAACGAAGATCGTCTTGTTAGGGTTTCGT 253
Query 240 CCGCATCTATGGATTCTCTGTCAACTGTGGTATTGACATGAATTTCAGCTTTCATGATGA 299
|||||||||||||||||||||||| || |||||||| ||||||||| |||||| ||||||
Sbjct 254 CCGCATCTATGGATTCTCTGTCAAATGGGGTATTGATATGAATTTCGGCTTTCGTGATGA 313
Query 300 CGGAATCTATCTGGTTACACGATCAACCTTCTCCTCGGTCGATGATACCGTCACCAAAAC 359
||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||
Sbjct 314 CGGAATCTATCTGGTTAAACGATCAATCTTCTCCTCGGTCGATGATACCTTCAGCAAAAC 373
Query 360 CAGTGGCTAATGTCCATCGCCAAAGGTGTAGGAGCGTCTTCAAGTTACTGGTCCAGAGGG 419
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 374 CAGTGGCTAATGTCCATCGCCAGAGGTGTAGGAGTGTCTTCAAGTTACTAGTCCAGAGGG 433
Query 420 AAATTTCACCAAAAACAAAGTTTGTGCCAAGAAAACGGTGGGGTGAAAGCCGATGGGATG 479
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 434 AAATTTCACCAAACACAAAGTTTGTTCCAAGAAAACGGTGGGGTGAAAGCCGATGTGATG 493
Query 480 CTGATTCGTCGTGTGGAACCACTAGCGAACCAGTGAGCGAGCAGGGACATAATCTTATTT 539
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 494 CTGATTCGTCGTGTGGAACCACTAGCGAACCAGTGAGAGAGCAGGGACTTAATCTTATTT 553
Query 540 CTTGGGTTGAGGCAGAGTCATTGCAGTATTTATCTGCTAAATACTGTCCTCTTGTACCTC 599
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 554 CTTGGGTTGAGGCAGAGTCATTGCAGCATTTATCTGCTAAATACTGTCCTCTTGTACCTC 613
Query 600 CTCCAAGGTCAACTATTGCAGCAGCTTTTAGCTCTGATGGAAGAACTCTTGCCTCTACAC 659
||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct 614 CTCCAAGGTCAACGATTGCAGCAGCTTTTAGTTCAGATGGAAGAACTCTTGCTTCTACAC 673
Query 660 ATGGTGACCACACTGTAAAAATTATTGATTGTGAGACAGGAAAATGCTTAAAAATTTTGA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 674 ATGGTGACCACACTGTAAAAATTATTGATTGTGAGACAGGAAAATGCTTAAAAATATTGA 733
Query 720 CTGGCCATCGGAGGACACCCTGGGTGGTCAGATTCCACCCGCGCCACTCAGAAATAGTTG 779
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 734 CTGGCCATCGAAGGACACCCTGGGTGGTCAGATTTCACCCGCGCCACTCAGAAATAGTTG 793
Query 780 CTAGTGGAAGTTTAGATCATGAGGTGCGCTTATGGAATGCAAAAACTGCGGAGTGTATTA 839
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 794 CTAGTGGAAGTTTAGATCATGAGGTGCGCTTATGGAATGCAAAAACTGGGGAGTGTATCA 853
Query 840 GAACTCATGATTTCTATCGACCTATTGCTTCCATTGCTTTCCACGCT-GATGGTGAATTA 898
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 854 GAACTCATGATTTCTATCGACCTATTGCTTCCATTGCTTTCCACGCTGGA-GGTGAATTA 912
Query 899 CTTGCTGTTGCATCTGGTCATAAGTTGCACATTTGGCATTATAATAAGATAGGGGAGGAC 958
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||
Sbjct 913 CTTGCTGTTGCATCTGGTCATAAGTTGCACATATGGCATTATAATAAGGGAGGGGATGAC 972
Query 959 TCGTCACCAGCAATTGTGTTGAAGACAAGGCGTTCCCTGAGAGCTGTACACTTTCATCCA 1018
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 973 TCGGCACCAGCAATTGTGTTGAAGACAAGGCGGTCCCTGAGAGCTGTACACTTTCATCCA 1032
Query 1019 CATGGGGTTCCTCTTCTCTTGACTGCTGAGGTGACTGACATTGATTCATCAGATTCCGCA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 CATGGGGTTCCTCTTCTCTTGACTGCTGAGGTGACTGACATTGATTCATCAGATTCCGCA 1092
Query 1079 ATGACAAGAGCAACATCTCCGGGTTATTTGCGATATCCGCCCCCTGCTATTTTCTTCACC 1138
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1093 ATGACAAGATCAACATCTCCAGGTTATTTGCGATATCCGCCCCCTGCTATTTTCTTCACC 1152
Query 1139 AACACACAAAGTGGCAGTCGTACCAGTTTGGCAGCCGAACTGCCACTTGTGCCATTACCG 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1153 AACACACAAAGTGGCAGTCGTACCAGTTTGGCAGCCGAACTGCCACTTGTGCCATTACCG 1212
Query 1199 TACTTGCTCTTGCCTTCATATTCTCCTGATGATCCAAGAATACAATATTCTAGTGGTGCT 1258
|| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||| ||
Sbjct 1213 TATTTGCTCTTGCCTTCATATTCTGCGGATGATCCAAGAATACTATATTCTAGTGGTACT 1272
Query 1259 ACTGGTCCAAGGACTGCACAAACGAGATTTCAGAGTAACCAAAGTTCTGTAGAAC-TAGG 1317
||||||||||||| ||||||||| || ||||||||||| |||||||||||||||| | ||
Sbjct 1273 ACTGGTCCAAGGAATGCACAAACAAGGTTTCAGAGTAATCAAAGTTCTGTAGAACAT-GG 1331
Query 1318 CAGCAGAACAATTTCACCTTCTCCTCTTCCCATGGCTACGTCTGCTGATCTTTCTGGTTC 1377
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 CAGCAGAACAATTTCGCCTTCTCCTCTTCCCATGGCTACGTCTGCTGATCTTTCTGGTTC 1391
Query 1378 CTATCATGTCCCAGACAATTCTGCTGGTAATACATTTACTGCCCAAGCTGGAGCTAGAAA 1437
|||||||||||||||||| |||||| ||||||||||| || ||||||| |||||||||||
Sbjct 1392 CTATCATGTCCCAGACAACTCTGCTAGTAATACATTTGCTACCCAAGCAGGAGCTAGAAA 1451
Query 1438 TTCTACCACTGCAGTTGATGCCATGGATGTAGATGAAGCTCAACCTGCTGGAAGAAATAG 1497
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1452 TTCTACTACTGCAGTTGATGCCATGGATGTAGATGAAGCTCAACCTGTTGGAAGAAATAG 1511
Query 1498 AGTTCCCAGTCAAGTTTCAAGTCAACCAGATTTACTCGAGTTTGGACAACTTCAGCAGTT 1557
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1512 AGTTCCCAGTCAAGTTTCAAGTCAACCAGATTTACTGGAGTTTGGACAACTTCAGCAGTT 1571
Query 1558 ATTTCAATTTAGAGACAGAGGTTCCTGGGAGTTACCTTTTCTACAAGGGTGGTTGATGGC 1617
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1572 ATTTCACTTTAGAGACAGAGGTTCCTGGGAGCTACCTTTTCTACAAGGGTGGTTGATGGC 1631
Query 1618 TCAAAGCCAGGCTGGTGCTAATTCAGTGGCTCTTCCTACTGGTAGTAGTGGTCATGTCAA 1677
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1632 TCAAAGCCAAGCTGGTGCTAATTCAGTGGCTCTTCCTACTGGTAGTAGTGGTCACGTCAA 1691
Query 1678 CTCAACTCCTTATACGGGTTCTTC---A---TC-CA--CA------GCCAGTCTAGAGGC 1722
|||||||||||||| ||||||||| | || || || ||||||||||||||
Sbjct 1692 CTCAACTCCTTATATGGGTTCTTCTTCAGCATCTCATTCATCCACAGCCAGTCTAGAGGC 1751
Query 1723 CGGAGTAGCGTCATTAGAAATTCCTGGAGGTGTTAACTTATATGGGGTTTCTGCAAGAGG 1782
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1752 TGGAGTAGCGTCATTAGAAATTCCTGGTGGTGTTAACTTATATGGGGTTTCTGCAAGAGG 1811
Query 1783 TGACTCCCGGGACCGAATTCTACAGTCCCGCTTCGCAGGATCTGGTTTAGCAGAAGGTCT 1842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1812 TGACTCCCGGGACCGAATTCTACAGTCCCGCTTCGCAGGATCTGGTTTAGCAGAAGGTCG 1871
Query 1843 TTCCTCTCGTAACACTCAACATGAAGGAGCTGATACTCAACCTGTGGTAAACAGAATCCC 1902
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1872 TTCCTCTCGTAACACTCAACATGAAGGAGCTGATGCTCAACCTGTGGTAAACAGAATCCC 1931
Query 1903 TTCTGAACTGGCTACTTCAATTGCTGCCGCAGAGTTGCCTTGCACCGTCAAACTGAGAGT 1962
|||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||
Sbjct 1932 TTCTGAACTGGCTAGTTCAATTGCTGCTGCAGAGTTGCCTTGTACTGTCAAACTGAGAGT 1991
Query 1963 GTGGTCACATGACATCAAAGACCCATGTGCAATACTGAAGTCTGACAAATGTCGATTAAC 2022
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1992 GTGGTCACATGACATCAAAGACCCATGTTCAATACTGAAGTCTGACAAATGTCGATTAAC 2051
Query 2023 AATACATCATGCTGTTCTTTGCAGTGAGATGGGAGCCCATTTTTCTCCATGTGGGAGATA 2082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2052 AATACATCATGCTGTTCTTTGCAGTGAGATGGGAGCCCATTTTTCTCCATGTGGGAGATA 2111
Query 2083 TTTAGCAGCCTGTGTTGCATGTGTTATTCCTCATACTGAAACAGATCCAGGTTTGCAGAC 2142
||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||
Sbjct 2112 TTTAGCAGCCTGTGTTGCATGCGTTATTCCTCATGCTGAGACAGATCCAAGTTTGCAGAC 2171
Query 2143 ACTGGTCCAACAAGATTCAGGGCTCGCAACTTCCCCTACTCGACATCCTGTCACAGCACA 2202
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2172 ACTGGTCCAACAAGACTCAGGGCTTGCAACTTCCCCTACTCGACATCCTGTCACAGCACA 2231
Query 2203 TCAAGTCATGTATGAACTTCGTGTGTATTCTCTCGAAAAGGAATCATTTGGTTCGGTACT 2262
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 2232 TCAAGTCATGTATGAACTTCGTGTGTATTCTCTGGAAAAAGAATCATTTGGTTCGGTACT 2291
Query 2263 TGTGTCCCGGGCAATTAGGGCTGCACATTGCTTGACCTCTATCCAGTTCTCACCAACCTC 2322
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2292 TGTGTCCCGGGCAATTAGGGCTGCACATTGCTTAACCTCTATCCAGTTCTCACCAACCTC 2351
Query 2323 CGAGCACATTCTGCTTGCATATGGTCGGCGTCATGGTTCTCTTTTGAAGAGCATTGTGAG 2382
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2352 CGAGCACATTCTGCTTGCATATGGTCGTCGTCATGGTTCTCTTTTGAAGAGCATTGTGAG 2411
Query 2383 TGATGGAGAAACAACATCACATTTTTTCACAGTGTTGGAGATTTACAGAGTTTCAGATAT 2442
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2412 TGATGGAGAAACAACATCACATTTTTTCACAGTTTTGGAGATTTACAGAGTTTCAGATAT 2471
Query 2443 GGAACTGGTGAGAGTACTCCCAAGCTCAGAGGATGAAGTTAATGTTGCTTGCTTTCATCC 2502
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2472 GGAACTGGTGAGAGTACTTCCAAGCTCAGAGGATGAAGTTAATGTTGCTTGCTTTCATCC 2531
Query 2503 TTCTCCTGGGGGAGGTCTTGTCTATGGAACAAAGGAGGGAAAACTAAGGATCTTCCGGTA 2562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2532 TTCTCCTGGGGGAGGTCTTGTCTATGGAACAAAGGAGGGAAAACTAAGGATCTTCCGGTA 2591
Query 2563 CAACACAGCTGCTGCGTCCAACCTCACTGCGCCAAATAGCTCTCCTGATGAGAACCTGGC 2622
||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||
Sbjct 2592 CAACACAGCTGCTGCGTCCAATCTCACTGCACCAAATAGCTCTCCCGATGAGAACTTGGC 2651
Query 2623 CGAGGTAGAATTATTGACAAGGTGCAGACCTATGCGTTAGAATGCTAGACAGGGGAGAAT 2682
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2652 CGAGGTAGAATTATTAACAAGGTGCAGACCTATGCGTTAGAATGCTAGACAGGGAAGAAT 2711
Query 2683 TCGGGTGTCAACCGTTCTATATACAC--TCTCATAGACAGATCGTGCATTGCGGG-CTTA 2739
| |||| |||||| |||||||||||| ||||||||||||||| ||||||||||| || |
Sbjct 2712 TTGGGTCTCAACCATTCTATATACACACTCTCATAGACAGATCTTGCATTGCGGGACT-A 2770
Query 2740 TTTATCTTCCTCTGTTTCTTTTCGGGTAATTCCTCTCATTCTGCTTGCTCGCGGTGCTTT 2799
|||| |||||| ||||||||||||||| |||| || | ||||| ||||||||||||||||
Sbjct 2771 TTTACCTTCCTTTGTTTCTTTTCGGGTTATTCTTCCCGTTCTGTTTGCTCGCGGTGCTTT 2830
Query 2800 TAGTTGTCCTGAACCG-------A----AA-CCTGAGAAGCTTTTC-CCATTCACAAGCT 2846
|||||||||| | ||| | || |||||||||||||| |||||||| ||||
Sbjct 2831 TAGTTGTCCT-ACCCGCTGTGCGATTCCAAACCTGAGAAGCTTTTTTCCATTCACGAGCT 2889
Query 2847 GGTGGTATCTTTTTCTT-TTT-CTTATATACTGTGGAGGGCCACAGGTTGGGATGGCCC- 2903
||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||
Sbjct 2890 GGTGGTATCTTTTTCTTATTTTCTTATATACTGTTGAGGGCCGTAGGTTGGGATGGCCTA 2949
Query 2904 -CT-C--TT--CAA----TTTGCTT-aaaaaaagaaaaaaaaaaCGAAGCAGGTTTCTGA 2952
|| | || ||| ||| ||| ||||||| |||||| ||| |||||||||||||||
Sbjct 2950 TCTTCCATTTGCAAACCCTTTTCTTTAAAAAAACAAAAAAGAAATGAAGCAGGTTTCTGA 3009
Query 2953 GTCTGTTGTTTAAAAAGACTGCAGAAAAATGTTTaaaaaaaaaaaa-GTTTTT--GTTTG 3009
|| |||||||||||| |||| ||||||||||| |||||||||| | |||||| |||||
Sbjct 3010 GTTTGTTGTTTAAAATGACTTCAGAAAAATGT--AAAAAAAAAAGATGTTTTTTTGTTTG 3067
Query 3010 -T---T-G-T-----AGCTTTGTATCTAAGATTGTAACCACGTTTTTTCCTCTCTAAGAT 3058
| | | | || |||||| |||||||||||||||||||||||||||| ||||||
Sbjct 3068 ATAAATTGATGTTGTAG-TTTGTAACTAAGATTGTAACCACGTTTTTTCCTCTGTAAGAT 3126
Query 3059 C-TTTTT 3064
| |||||
Sbjct 3127 CGTTTTT 3133
> AT5G43930.4 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:17676816-17681000 FORWARD LENGTH=2831
Length=2831
Score = 1007 bits (545), Expect = 0.0
Identities = 1055/1291 (82%), Gaps = 75/1291 (6%)
Strand=Plus/Plus
Query 1338 CTCCTCTTCCCATGGCTACGT-CTGCTGATCTTTCTGGTTCC-TATCA-TGTCCCA-GAC 1393
||||||||||| ||||||| | | | || || |||||| ||| || | ||| ||| ||
Sbjct 1220 CTCCTCTTCCCTTGGCTACATCCAG-TGGTCCTTCTGG-TCCAAAT-AGTGTTCCAGGA- 1275
Query 1394 AATTCTGCTGGTAATACATTTAC-TGCCCAAGCTGGAGCTAGAAATTCTACCACTGCAGT 1452
|||||| | | || | |||| | | ||| |||||||| ||||| |||| | |||||||
Sbjct 1276 AATTCTCCCAGCAACATATTT-CTTACCCGAGCTGGAGATAGAACTTCT--C-CTGCAGT 1331
Query 1453 TGATGCCATGGATGTAGATGAAGCTCAACCTGCTGGAAGAAATAGAGTTCCC-AGTCAAG 1511
||||| |||||||||||||||||||||||||| |||||||||| || |||| || ||||
Sbjct 1332 TGATGGCATGGATGTAGATGAAGCTCAACCTGTTGGAAGAAATGGA-ATCCCTAGCCAAG 1390
Query 1512 TTTCAAGTCA-ACCAGATTTACTC-GAGTTTGGACA-ACTTCAGCAGTTATTTCAATTTA 1568
|||||| | | | ||||||| | | ||| ||||||| | ||| ||| |||||||| ||||
Sbjct 1391 TTTCAAAT-AGATCAGATTT-CCCTGAGCTTGGACAGA-TTCGGCAATTATTTCACTTTA 1447
Query 1569 GAGA-CAGAGGTTCCTGGGAGTTACCTTTTCTACAAGGGTGGTTGATGGCTCAAAGCCA- 1626
| || | ||| ||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 1448 GGGATC-GAGTTTCCTGGGAGTTACCTTTTCTACAAGGATGGTTGATGGCTCAAGGTCAT 1506
Query 1627 GGCTGGTGCTAATTCAGTGGCT-CTTCCTACTGGTAGTAGTGGTCATGTCAACTCAACTC 1685
|| || ||||||| |||||| | | ||||||||| |||||| ||||| || |||| |||
Sbjct 1507 GG-TGTTGCTAATCCAGTGGTTAC-TCCTACTGGCAGTAGTAATCATGGCATCTCAGCTC 1564
Query 1686 CTTATACGGGTTCTTCATCCACAGCCAGTCTAGAGGCCGGAGTAGCGTCATTAGAAATTC 1745
| || | | ||| ||||||||||| ||||| | |||||||| |||||||| ||
Sbjct 1565 C--AT-C-----C-TCA---ACAGCCAGTCTGGAGGCTGCAGTAGCGTTATTAGAAA-TC 1611
Query 1746 CTG-GAGGTGTTAACTTATATGGGGTTTCT-GCAAGAGGTGACTCCCGGGACCGAA-TTC 1802
| | | |||||||||||| ||| ||| ||| | |||||| | | | ||| | || |||
Sbjct 1612 CCGAGTGGTGTTAACTTACATGCGGTGTCTAG-AAGAGGCGGGGCTCAGGAACAAACTTC 1670
Query 1803 TACAGTCCCGCTTCGCAG-GATCTGGTTTAGCAGAAGGTCTTTCCTCTCGTAACACTCAA 1861
||| ||| ||| | | || |||| ||| | |||||| | || |||||||||||||||
Sbjct 1671 -ACAACCCCAATTCTC-GAGAACTGGATTACCGGAAGGTGTATCTTCTCGTAACACTCAA 1728
Query 1862 CATGAAGGAGCTGATACTCAACCTGTGGTAAACAGAATCCCTTCTGAACTGGCTACTTCA 1921
|||| | || |||| |||||||||| ||||| || ||| ||||| || ||||| |||
Sbjct 1729 CATG--GAAG-TGATGCTCAACCTGTAGTAAATAGGGTCCAGTCTGAGCTTGCTACCTCA 1785
Query 1922 ATTGCTG---C--C-GCAG-A---G-T--T---G-----CCTTGCACCGTCAAACTGAGA 1960
||||||| | | |||| | | | | | ||||| || |||||||| |||
Sbjct 1786 ATTGCTGCTTCGGCTGCAGCAGCTGCTGCTGCAGAATTACCTTGTACTGTCAAACTCAGA 1845
Query 1961 GTGTGGTCACATGACATCAAAGACCCATGTGCA-ATACTGAAGTCTGACAAATGTCGATT 2019
||||||| ||||||||||||||||||| |||| | |||||| || |||| ||||| |||
Sbjct 1846 ATGTGGTCGCATGACATCAAAGACCCATATGCACA-ACTGAAATCCGACAGATGTCTATT 1904
Query 2020 AACAATACATCATGCTGTTCTTTGCAGTGAGATGGGAGCCCATTTTTCTCCATGTGGGAG 2079
||||||| ||||| || ||||||||||| |||||||| |||| ||| |||||||||||
Sbjct 1905 TACAATACCGCATGCCGTCCTTTGCAGTGAAATGGGAGCTCATTATTCGCCATGTGGGAG 1964
Query 2080 ATATTTAGCAGCCTGTGTTGCATGTGTTATTCCTCATACTGAAACAGATCCAGGTTTGCA 2139
||||||||| ||||||||||| |||||| |||||||| ||| | |||||| || ||||
Sbjct 1965 ATATTTAGCGGCCTGTGTTGCGTGTGTTTTTCCTCATGGTGAGATAGATCCTGGACTGCA 2024
Query 2140 GACAC-TGGTCCAACAAGATTCAGGGCTCGCAACTTCCCCTACTCGACATCCTGTCACAG 2198
||||| | | ||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 2025 GACACAAGCT-CAACAAGATTCAGGGCTTGCAACTTCCCCAACTCGACACCCTGTCACAG 2083
Query 2199 CACATCAAGTCATGTATGAACTTCGTGTGTATTCTCTCGAAAAGGAATCATTTGGTTCGG 2258
|||| |||||||| || || |||||||||||||||||| | |||||| |||||||| |
Sbjct 2084 CACACCAAGTCATTTACGAGCTTCGTGTGTATTCTCTCCAGAAGGAAAGTTTTGGTTCAG 2143
Query 2259 TACTTGTGTCCCGGGCAATTAGGGCTGCACATTGCTTGACCTCTATCCAGTTCTCACCAA 2318
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 2144 TACTTGTGTCACGGGCAATTAGAGCTGCACATTGCTTGACCTCTATCCAGTTCTCACCCA 2203
Query 2319 CCTCCGAGCACATTCTGCTTGCATATGGTCGGCGTCATGGTTCTCTTTTGAAGAGCATTG 2378
| || ||||| || || ||||||||||| |||||||||||||||||||||| |||||| |
Sbjct 2204 CTTCGGAGCATATACTACTTGCATATGGGCGGCGTCATGGTTCTCTTTTGAGGAGCATCG 2263
Query 2379 TGAGTGATGGAGAAACAACATCACATTTTTTCACAGTGTTGGAGATTTACAGAGTTTCAG 2438
| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 2264 TTAGTGATGGTGAAACAACATCACATTTTTTCACAGTATTGGAGATATACAGAGTTTCAG 2323
Query 2439 ATATGGAACTGGTGAGAGTACTCCCAAGCTCAGAGGATGAAGTTAATGTTGCTTGCTTTC 2498
||||||| || ||||||||||| ||||| |||||||||||||| || ||||| || ||||
Sbjct 2324 ATATGGAGCTTGTGAGAGTACTGCCAAGTTCAGAGGATGAAGTGAACGTTGCGTGTTTTC 2383
Query 2499 ATCCTTCTCCTGGGGGAGGTCTTGTCTATGGAACAAAGGAGGGAAAACTAAGGATCTTCC 2558
||||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||
Sbjct 2384 ATCCTTCTCCTGGAGGAGGTCTTGTTTATGGGACAAAGGAGGGGAAACTGAGGATCTTCC 2443
Query 2559 GGTACAACACAGCTGCTGCGTCCAACCTCAC 2589
|||||| ||||||||| | || ||| ||||
Sbjct 2444 AGTACAATACAGCTGCTACCTCAAACTTCAC 2474
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 152357005891
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5