BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470409
Length=3532
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:... 4974 0.0
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:... 1363 0.0
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:... 976 0.0
AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:... 180 1e-43
> AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1148659-1154652
REVERSE LENGTH=3610
Length=3610
Score = 4974 bits (2693), Expect = 0.0
Identities = 3322/3612 (92%), Gaps = 98/3612 (3%)
Strand=Plus/Plus
Query 1 ctctctctctctctatttatctccctttcttgtcctccgtcgtcttttttggtttgttct 60
|||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 17 CTCTCTTTCTCTCTATTTATCTCTCTTTCTTTTCCTCCGTCGTCTTTTTTGGTTTGTTCT 76
Query 61 ctctctGTAGAATCTCTTAAGAGCTGCCATTAACCCATTCAACGAATTAGCTTCTCTTTG 120
|||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||
Sbjct 77 CTCTCTGTAGAATCTCATAGGAGCTGCCATTAGCCCATTCAACGAATTAGCTTCTCTTTG 136
Query 121 CTCTTTCTTCCACCATCTCAGTTGAAGAAGAGAGAGAGCTTTGACG-AA-AATATTCATA 178
||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||
Sbjct 137 CTCTTTCTTCCACCATCTCAGTTGAAGGAGAGAGAGAGCTTTGACGAAACAAT-TTCATA 195
Query 179 CTGGGGAATGGCAGAGAC------T---G--T-T---GTTGGACGATCAGTAGAGGAGAG 223
|||||||||||||||| | | | | | ||||||||||| ||||||||||
Sbjct 196 CTGGGGAATGGCAGAGGCTGTTGATGAAGATTCTGGGGTTGGACGATCTCTAGAGGAGAG 255
Query 224 TTCTAATGGACAACACAGTCAAGCAGGAGAAGCACTCTCTGAGTGGCGGTCTTCTGGTCA 283
||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 256 TTCAAATGGACAACACAGTCAAGCAGGAGAAGCACTCTCAGAGTGGCGCTCTTCTGGTCA 315
Query 284 AGTAGAGAACGGGACTCCATCTACGTCGCCCTCCTACTGGGATATCGATGAGGATGATGA 343
||| ||||||||||||||||| || || ||||| ||||||||||||||||| ||||||||
Sbjct 316 AGTGGAGAACGGGACTCCATCCACATCCCCCTCTTACTGGGATATCGATGACGATGATGA 375
Query 344 TTATGGCCTTAAACCCTCTGAGTTATTTGGAAAATATACTTGGAAGATTCCAAAATTTTC 403
||||||||| |||||||||||||||| |||| | ||||||||||||||||| ||||||||
Sbjct 376 TTATGGCCTGAAACCCTCTGAGTTATATGGACAGTATACTTGGAAGATTCCGAAATTTTC 435
Query 404 AGAAATCAATAAAAGGGAGCATCGTAGCGATAATTTTGAAGCTGGCGGCTACAAATGGTA 463
|||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||
Sbjct 436 AGAAATCACTAAAAGGGAGCATCGTAGCAATGTTTTTGAAGCTGGCGGTTACAAATGGTA 495
Query 464 TATTTTAATTTATCCACAAGGATGTGATGTTTTTAATCATCTCTCCTTGTTTCTCTGTGT 523
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 496 TATTTTAATTTATCCACAAGGATGTGATGTTTGTAATCATCTCTCCTTGTTTCTCTGTGT 555
Query 524 TGCAAACTATGATAAACTTCTTCCAGGTTCTTTTGCTATCTTGGAGGCAGGCTGGAGTCA 583
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 TGCAAATTATGATAAACTTCTTCCAGGTTCTTTTGCTATCTTGGAGGCAGGCTGGAGTCA 615
Query 584 TTTCGCTCAGTTTACTATATCTGTGTTGAATAAAGATATAAAGAAAACGAAGTTTTCAGA 643
|||||||||||||||||||||||||||| | ||||| | |||||| | |||||||||||
Sbjct 616 GTTCGCTCAGTTTACTATATCTGTGTTGAGTCAAGATCTCAAGAAATCAAAGTTTTCAGA 675
Query 644 TACACTGCACCGGTTTTGGAAGAAAGAGCATGATTGGGGATGGAAAAAGTTTATGGAGTT 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 676 TACACTGCACCGGTTTTGGAAGAAAGAGCATGATTGGGGATGGAAAAAGTTTATGGAGTT 735
Query 704 ACCTAAGTTAAAGGACGGGTTCATAGATGATTCTGGCTGTCTTACAATTGAGGCTCAAGT 763
||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 736 GCCTAAGTTAAAAGACGGGTTCATAGATGAGTCTGGCTGTCTTACAATTGAGGCTAAAGT 795
Query 764 TCAGGTGATCAGAGAGAGGGTGGACAGACCTTTTCGCTGCCTTGATTGTAGTTATAGGAG 823
||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||
Sbjct 796 TCAGGTGATCAGAGAGAGGGTAGACCGACCTTTTCGCTGCCTTGATTGCGGTTATAGGAG 855
Query 824 AGAACTTGTTAGGGTGTATTTGCC-AAATGTGGATCAAAATTGCCGGCGTTTTGTTGAAG 882
||||||||||||||||||||| || ||||||||| |||| |||||| |||||||||||||
Sbjct 856 AGAACTTGTTAGGGTGTATTT-CCAAAATGTGGAGCAAATTTGCCGACGTTTTGTTGAAG 914
Query 883 AGAGAAGAAGCAAGCTCGGGAGGTTGATAGAGGACAAGGCAAGATGGACTAGCTTCGGTG 942
||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 915 AGAAAAGAAGCAAGCTAGGGAGGTTGATAGAGGACAAGGCAAGATGGACAAGCTTCGGTG 974
Query 943 TTTTCTGGTTAGGGATGGACCAAAACTCTAGGCGTCGGATGTCTAGAGAGAAAATGGACG 1002
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 975 TTTTCTGGTTAGGGATGGACCAAAACTCTAGGCGTCGGATGTGTAGAGAGAAAGTGGACG 1034
Query 1003 TAATCCTAAAAGGAGTTGTAAAACACTTTTTCGTAGAAAAAGAAGTTACATCCACTTTGG 1062
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 1035 TAATCCTAAAAGGAGTTGTAAAACACTTTTTCGTAGAGAAAGAAGTTTCATCCACTTTGG 1094
Query 1063 TGATGGATTCCTTGTATAGTGGGTTGAAGGCTCTTGAAGGCCAAACTAAGAACACGAAAG 1122
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1095 TGATGGATTCCTTGTATAGTGGGTTGAAGGCTCTAGAAGGCCAAACTAAGAACATGAAAG 1154
Query 1123 ATAGGCCAAGACTGTTAGATGCCAAGGAATTGCCAGCTCCAATTGTAAGCGTGGAAAAAG 1182
|||| | ||||| |||||||||||| |||||||||| || ||||| |||||||| ||||
Sbjct 1155 CTAGGTCGAGACTTTTAGATGCCAAGCAATTGCCAGCACCGATTGTTAGCGTGGACAAAG 1214
Query 1183 ATATGTTCGTATTAGTTGATGATGTGCTGTTACTCCTAGAGAGAGCTGCTCTTGAGCCAT 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 ATATGTTCGTATTAGTTGATGATGTGCTGTTACTCCTAGAGAGAGCTGCTCTTGAGCCAT 1274
Query 1243 TGCCTCCAAAAGAGGAGAAAGGTCCCCAGAACCGTACAAAGGATGGCAATGATGGAGAAG 1302
||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1275 TGCCTCCAAAAGATGAAAAAGGTCGCCAGAACCGTACAAAGGATGGCAATGATGGAGAAG 1334
Query 1303 AGGTCAACAAGGAAGCCTACGAGCGTGATGAGAGACGTTTAACTGAGTTGGGTAGACGAA 1362
||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||
Sbjct 1335 AGGTCAACAAGGAAGCCGATGAGCGTGATGAGAGACGTTTAACTGAATTGGGTAGACGAA 1394
Query 1363 CTGTGGAAATATTTGTTCTTGCCCATATCTTCAGCAGTAAAATCGAGGTTGCATATCAAG 1422
||||||| |||||| ||||| ||||||||||||||| ||||||||| |||||| ||||||
Sbjct 1395 CTGTGGAGATATTTATTCTTTCCCATATCTTCAGCACTAAAATCGAAGTTGCACATCAAG 1454
Query 1423 AAGCTATCGCGCTAAAAAGGCAGGAAGAACTTATTCGTGAGGAAGAGGAAGCGTGGTTGG 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1455 AAGCTATCGCGCTAAAAAGGCAGGAAGAACTTATTCGTGAGGAAGAGGAAGCGTGGTTGG 1514
Query 1483 CAGAAACCGAACAGAGGGCCAAAAAAGGAGCAGCCGAGAGAGAGAagaaatctaagaaga 1542
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 1515 CAGAAACCGAACAGAGGGCCAAAAGAGGAGCAGCCGAGCGAGAGAAGAAATCTAAGAAGA 1574
Query 1543 aacaggcgaaacagaaacggaacaaaaataaagggaaggacaaaagaaaggaagaaaagg 1602
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1575 AACAGGCGAAACAGAAACGGAACAAAAATAAAGGGAAGGACAAAAGGAAGGAAGAAAAGG 1634
Query 1603 TGAGCTTTGCATCACATGAAAAGGATCTCGAGGAAAACCAAAAC------------GATG 1650
|||| |||||| |||||| ||||||||||||||||||||||||| ||||
Sbjct 1635 TGAGTTTTGCAACACATGCAAAGGATCTCGAGGAAAACCAAAACCAAAACCAAAACGATG 1694
Query 1651 AGGAAGAAAAGGATTCTGTCACGGAGAAAGCACACTCTTCAGCTGAAAAGCCTGATACTC 1710
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1695 AGGAAGAAAAGGATTCTGTCACGGAGAAAGCACAATCTTCAGCTGAAAAGCCTGATACTC 1754
Query 1711 TTGGAGATGTGTCCGACATATCTGATTCTGTGGATGGTTCGGCTGACATTGTTCAGCCTG 1770
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1755 TTGGAGATGTGTCCGACATATCTGATTCTGTGGATGGTTCGGCTGACATTCTTCAGCCTG 1814
Query 1771 ATTTAGAAGATAGGGATAGTAGTTCTGTTCATTGGGATACTGACGCCTTGGAAATTCATG 1830
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1815 ATTTAGAAGATAGGGATAGTAGTTCTGTTCTTTGGGATACTGATGCCTTGGAAATTCATC 1874
Query 1831 CTGCATCATCAGGAGGGAGCAGTAGAGGAAGAGGCA---C-A---C--C-C--AATGGAA 1878
|| ||||||||| ||||||||||||||||||||||| | | | | | |||||||
Sbjct 1875 CTCCATCATCAGAAGGGAGCAGTAGAGGAAGAGGCATTTCGATATCTACACCCAATGGAA 1934
Query 1879 TTGCAGAAAGAAAGAGTCAGTCCACTATGGATGATAGTTCTTCAACTTGTTCTAATGATT 1938
|| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1935 TTACAGAAGGAAAGAGTCATTCCACTATGGATGATAGTTCTTCAACTTGTTCTAATGATT 1994
Query 1939 CTATCCGGTCGGGGGTAACCAATGGGTCCTACCAAGGGAATGCCTTGAATTTCCGAAACC 1998
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1995 CTATCCGATCGGGGGTAACCAATGGGTCCTACCAAGGGAATTCCTTGAATTTCCGAAACC 2054
Query 1999 GGAAGTCGCCGAACAGAGGAAAGAATCAACAAGTAAAAGCAAT-ATCTGATGCCCACAGT 2057
|||||||||||||| ||||||||| |||||||| |||||||| | ||||||||||||||
Sbjct 2055 AGAAGTCGCCGAACAAAGGAAAGAACCAACAAGTGAAAGCAATGA-CTGATGCCCACAGT 2113
Query 2058 TTAGGGAGTGAAACAGATGATCAACCTTCAACACTTGGGACAGACCCAAAGAGTCAGAAT 2117
|||| ||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||
Sbjct 2114 TTAGCGAGTGAAACAGATGATCAACCCTCAACACTTGGAACAGACCCCAAGGGTCAGAAT 2173
Query 2118 TATTCTTCCGAGGCAAGCAACGTTGGTGAATCTGATTGGGTTGTTGTCTCCCACGTCCAG 2177
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2174 TATTCTTCCGAGGCAAGCAACGTTGGTGAATCTGATTGGGTTGTTGTCTCCCACATCCAG 2233
Query 2178 GAGGCAGAGGGTTCTCGAAATCGTATTCCTGTTGGGAAGGAACTCGACGTGGCTCAATCC 2237
||| ||||||||||||||||||||||||||||||||| ||||| | | || |||||||
Sbjct 2234 GAGCCAGAGGGTTCTCGAAATCGTATTCCTGTTGGGAGGGAACGCAAAACGGTTCAATCC 2293
Query 2238 ATTGTGAACTCGATCGACATGGATCGACCTAAAGAGAAAAGCGCTGCTGTACTTTCTTCT 2297
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2294 ATTGTGAACTCGGTCGACATGGATCGACCTAAAGAGAAAAGCACTGCTGTACTTTCTTCT 2353
Query 2298 CCCAGAAGTGTTGCCAAGAATCCATCACCATTAACTCAGA-AGAAACCAGAGAAAAAGAG 2356
||||||| ||||||||||||||| |||||||||||||||| | ||||| |||||||||||
Sbjct 2354 CCCAGAAATGTTGCCAAGAATCCTTCACCATTAACTCAGACA-AAACCGGAGAAAAAGAG 2412
Query 2357 CATTTCAACCGCAGACGCTATTCCAAGCAGGAAAGTACTGGCAACTGGACCACCTTCATC 2416
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2413 CATTTCAACCGCAGACGGTATTCCAAACAGGAAAGTACTGGCAACTGGACCACCTTCATC 2472
Query 2417 AAGTCAAGTAGTGCTTTCTTCAGATGTTCAGTCGCAAACTGCTGGTCTCAGAGCTGTTAT 2476
||| |||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||
Sbjct 2473 AAGCCAAGTAGTGCTTCCTTCAGATATTCAGTCGCAAACTGTTGGTCTCAGAGCTGATAT 2532
Query 2477 GCAAAAAATATCTGCTCCAAAACAACCAGCAGCAACAACTATATCAAGGCCTTCCAGTGC 2536
||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2533 GCAAAAACTCTCTGCTCCAAAACAACCACCAGCAACAACTATATCAAGGCCTTCCAGTGC 2592
Query 2537 TCCAATAATCCCTGCGATGCAACCCGCCCCAATCGCCGTCTCATCCTCGGTTCAAGCAAC 2596
|||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| ||||
Sbjct 2593 TCCAATAATCCCTGCGATGCGACCCTCCCCAATCACCGTCTCTTCCTCAGTTCAAACAAC 2652
Query 2597 AACATCCCTTCCTCGTTCGGTTAGCTCAGCTGGTCGTCTAGGTCCTGATCCATCCCTACA 2656
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2653 AACATCCCTTCCTCGTTCGGTTAGCTCAGCTGGTCGTCTAGGTCCAGATCCATCCCTACA 2712
Query 2657 CAACCAACAAACATACACTCCTCATTCCTATAAACATGCCATAGTTGGTAACTCTCTTAG 2716
|||||||||||||||||||||||| ||||||||| | || ||||| |||||||||||| |
Sbjct 2713 CAACCAACAAACATACACTCCTCAATCCTATAAAAACGCTATAGTCGGTAACTCTCTTGG 2772
Query 2717 TTCATCATC-T--AGTTTCAACCACCACCAAAACTCTCACGGAGTTGTCCCAACCACACT 2773
||||||||| | |||||||||||||||| || |||||| ||||||||||| |||||| |
Sbjct 2773 TTCATCATCATCTAGTTTCAACCACCACCCAAGCTCTCATGGAGTTGTCCCGACCACATT 2832
Query 2774 GCCATCATCATCTTACTCGCAAACACCGGCATCATCTTATCAGTCAAGCTTCCCTTACAG 2833
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 2833 GCCATCATCATCTTACTCGCAAGCACCAACATCATCTTATCAGTCAAGCTTCCCTTACAG 2892
Query 2834 TCAAGATGGGCTCTTGTGGACAGGAAGAAGTTCCAATTCTGTAAACATGGGCAGGAACAA 2893
||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||
Sbjct 2893 TCAAGATGGGCTCTTGTGGACAGGAAGAAGTCCCAGTTCTGTAAACATGGGCATGTACAA 2952
Query 2894 TAACCCTTACTCACCGGCCGTTACTAGCAAGAGATCGCTCAACCACATGGACATTCAGAT 2953
||| |||||||||| |||||||||||||| |||||||| |||||||||||| |||||||
Sbjct 2953 CAACACTTACTCACCCGCCGTTACTAGCAACAGATCGCTGAACCACATGGACGTTCAGAT 3012
Query 2954 CGCGCAGCAACAAGCACAAAGCTTGGTGACGGATGAGTTCCCTCACCTCGACATCATCAA 3013
||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct 3013 AGCGCAGCAACAAGCACAAAGCATGATGACGGATGAGTTCCCTCACCTAGACATCATCAA 3072
Query 3014 TGATCTGCTGGAAGATGAACAGTGCAGCAACATGGTGT-TAAACGGAAGCATATTCAATC 3072
||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 3073 TGATCTGCTGGAAGACGAACAGTGCAGCAACATGGTGTATAA-CGGAAGCATATTCAATC 3131
Query 3073 AACAACCCCAAGTGTTCAACGGGCAGTACTCATCATACCAGGGTGATGTAGGTGAGTTAT 3132
|||||| |||||||||||||||||||||||||||||||| || || | ||||||
Sbjct 3132 CACAACCGCAAGTGTTCAACGGGCAGTACTCATCATACCA---TG--GT-G---AGTTAT 3182
Query 3133 TGTCTGGTGGCAGGTCCAGGAGTTTTGGAGAAGAAGGATTCCATTACATGGCACGTGGAC 3192
|||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 3183 TGTCTGGTGGCAGGACCAGGAGTTTCGGAGAGGAAGGATTGCATTACATGGCACGTGGAC 3242
Query 3193 CATATGGTGCAGATGGATTGATGCCGACACAGTGGCAAATGGCGAACATGGACTTGTCTT 3252
|||||||| |||| ||| ||||||||| ||||||||||||| |||||||||||||||| |
Sbjct 3243 CATATGGTACAGACGGAATGATGCCGAGACAGTGGCAAATGACGAACATGGACTTGTCGT 3302
Query 3253 TGCTAGCAATGAGGAACAATAGGA-TGGAAGATGCAACATCATCAGCAGCAAATTACCAT 3311
||| ||||||||||| |||| ||| ||||||||| ||||||||||||||| |||||||||
Sbjct 3303 TGCCAGCAATGAGGAGCAAT-GGAATGGAAGATGGAACATCATCAGCAGCTAATTACCAT 3361
Query 3312 CACACATACTTTGGTTTGGACTCTTCGAATCCAAGTTTTGCGTCTGGTATCAATGGCTAC 3371
|||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||
Sbjct 3362 CACAGTTACTTTGGTTTGGACGCTTCGAATCCAAGTTTTACGTCTGGTATTAATGGCTAC 3421
Query 3372 ACCGAGTTCAGGCCATCGAATGGTCATTGA--AG-----GG-GA-------TTTGTAATG 3416
|||||||||||||||||||||||||||||| || || || |||||||||
Sbjct 3422 ACCGAGTTCAGGCCATCGAATGGTCATTGATCAGCAAATGGAGAGAGGGGATTTGTAATG 3481
Query 3417 TTTTTATT------aaaaa--aaaG-----CATGAA-ATTACAATTTGTGTAAAGAGAGA 3462
|||||||| ||||| ||| |||||| || |||||||||||||||||||
Sbjct 3482 TTTTTATTTTTTTTAAAAAGGAAAAAAAATCATGAATAT-ACAATTTGTGTAAAGAGAG- 3539
Query 3463 GTTGTCTTCTTGTCTTCCTCTACGTTTCAAATGGttttttttttaaaaaa-aTA-TATAA 3520
||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct 3540 -TTGTCTTCTTGTCATCCTCTACGTTTCAAATGGTTTTTTTTTTTTTAAATATAGTATAA 3598
Query 3521 GATAGTTTTCGC 3532
||||||||||||
Sbjct 3599 GATAGTTTTCGC 3610
> AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:17500542-17505646
FORWARD LENGTH=3789
Length=3789
Score = 1363 bits (738), Expect = 0.0
Identities = 1593/1989 (80%), Gaps = 126/1989 (6%)
Strand=Plus/Plus
Query 209 ATCAGTAGAGGAGAGTTCTAATGGAC-AACACAGTCAAGCAGGAGAAGCACTCTCTGAGT 267
|||| | || |||| ||| ||||||| || | |||||| ||| ||||||| || ||||||
Sbjct 543 ATCACTGGAAGAGAATTCAAATGGACAAAGA-AGTCAATCAGAAGAAGCAATCGCTGAGT 601
Query 268 GGCGGTCTTCTGGTCAAGTAGAGAACGGGACTCCATCTACGTCGCCCTCC-TACTGGGAT 326
|||| ||||||| ||||| ||||| || ||||| ||||| || || || || |||||
Sbjct 602 GGCGTTCTTCTGAACAAGTTGAGAATGGAACTCCTTCTACATC-TCCACCGTATTGGGAC 660
Query 327 ATCGATGAGGATGATGATTATGGCCT-TAAACCCTCTGAGTTATTT-GGAAAATATACTT 384
|||||||| ||||| |||| ||| | ||||| ||| | ||||| |||||| ||||||
Sbjct 661 ATCGATGATGATGACGATTTTGG-ATCAAAACCATCTCAACTATTTGGGAAAA-ATACTT 718
Query 385 GGAAGATTCCA-AAATTTTCAGAAATCAATAAAAGGGAGCAT-CGTAGCGATAATTTTGA 442
||| |||| | ||||||||||| ||||| ||| | |||| | || ||||| ||||||
Sbjct 719 GGACGATT-GAGAAATTTTCAGATATCAACAAACGAGAGC-TCCGCGGCGATGTTTTTGA 776
Query 443 AGCT-GGCGGCTACAAATGGTATATTTTAATTTATCCACAAGGATGTGATGTTTTTAATC 501
|| | || || |||||||||||||| ||||||||||||||||| |||||||||| || |
Sbjct 777 AG-TCGGGGGTTACAAATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACC 835
Query 502 ATCTCTCCTTGTTTCTCTGTGTTGCAAACTATGATAAACTTCTTCCAGGTTCTTTTGCTA 561
||||||| |||||||| ||||||||| || ||| ||| | | | || ||
Sbjct 836 ATCTCTCTTTGTTTCTATGTGTTGCACACCATG--AAA--------A-G--C--TT-CT- 878
Query 562 TCTTGGAGGCAGGCTGGAGTCATTTCGCTCAGTTTACTATATCTGTGTTGAATAAAGATA 621
|| |||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct 879 TC-------CAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTGTGTCGAATAAAGATC 931
Query 622 TAAAGAAAACGAAGTTTTCAGATACACTGCACCGGTTTTGGAAGAAAGAGCATGATTGGG 681
||||| | ||| ||||||||| | |||||||||||||||||||||||||||||||
Sbjct 932 CGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTGGAAGAAAGAGCATGATTGGG 991
Query 682 GATGGAA-AAAGTTTATGGAGTTACCTAAGTTAAAGGACGGGTTCATAGATGATTCTGGC 740
| ||||| ||| ||||| ||||||||||| || ||||| ||||| ||||||||||||||
Sbjct 992 GTTGGAAGAAA-TTTATTGAGTTACCTAAATTGAAGGAAGGGTTTATAGATGATTCTGGT 1050
Query 741 TGTCTTACAATTGAGGCTCAAGTTCAGGTGATCAGAGAGAGGGTGGACAGACCTTTTCGC 800
|||||||||||| | |||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct 1051 TGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGAGAGTGGACCGACCTTTTCGC 1110
Query 801 TGCCTTGATTGTAGTTATA-GGAGAGAACTTGTTAGGGTGTATTTGCCAAATGTGGATCA 859
|||||| ||| || |||| |||| ||||||||||||||||||||| |||||| || ||
Sbjct 1111 TGCCTTCATTATAAATATAGGGAG-GAACTTGTTAGGGTGTATTTGGGAAATGTAGAGCA 1169
Query 860 AAATTGCCGGCGTTTTGTTGAAGAGAGAAGAAGCAAGCTCGGGAGGTTGATAGAGGACAA 919
|| |||| |||| ||||| ||||||| |||||||||||| || |||||||||||||||||
Sbjct 1170 AATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTGGTAGGTTGATAGAGGACAA 1229
Query 920 GGCAAGATGGACTAGCTTCGGTGTTTTCTGGTTAGGGATGGACCAAAACTCTAGGCGTCG 979
||||| ||||| |||||| ||| ||||||| | ||| |||||||||| || ||||||||
Sbjct 1230 GGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGGACCAAAATTCAAGGCGTCG 1289
Query 980 GATGTCTAGAGAGAAAATGGACGTAATCCTAAAAGGAGTTGTAAAACACTT-TTTCGTAG 1038
||||| ||||||||||||| || || |||||| ||||||||||||||| ||| || |
Sbjct 1290 AATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTGTAAAACACTTCTTT-GTCG 1348
Query 1039 AAAAAGAAGTTACATCCACTTTGGTGATGGATTCCTTGTATAGTGGGTTGAAGGCTCTTG 1098
| || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1349 AGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATAGTGGATTGAAGGCTCTTG 1408
Query 1099 AAGGCCAAACTAAGAAC-ACGAAAGATAGGCCAAGACTGTTAGATGC-CAAGGAATTGC- 1155
||||||||| ||||||| | || || |||||| ||||| | ||| | || ||| | |
Sbjct 1409 AAGGCCAAAATAAGAACAAGGAGAG-TAGGCCGAGACTAATGGATACTGAA-GAA-TCCA 1465
Query 1156 CAGCTCCAATTGTAAGCGTGGAAAAAGATAT-GTTCGTATTAGTTGATGATGTGCTGTTA 1214
||||||||||||| |||||||| |||||| | ||| | |||||||||||||||| | |||
Sbjct 1466 CAGCTCCAATTGTTAGCGTGGACAAAGAT-TCGTTTGCATTAGTTGATGATGTGTTATTA 1524
Query 1215 CTCCTAGAG-AGAGCTGCTCTTGAGCCATTGCCTCCAAAAGAGGAGAAAG-GTCCCCAGA 1272
||| ||||| || |||||||| |||||||||||| ||||||||| |||| || | || |
Sbjct 1525 CTCTTAGAGAAG-GCTGCTCTGGAGCCATTGCCTAAAAAAGAGGA-AAAGAGTTCTCAAA 1582
Query 1273 ACCGTACAAAGGATGGCAATGATGGAGAAGAGGTCAACAAG-GAAGCC-TACGAGCGTGA 1330
||||||| |||||||| |||| |||||| || || | || |||||| | ||||||||
Sbjct 1583 ACCGTACGAAGGATGGGAATGCTGGAGAGGAATTC-AGTAGAGAAGCCGT-TGAGCGTGA 1640
Query 1331 TGAGAGACGTTTAACTGAGTTGGGTAGACGAACTGTGGAAATATTTGTTCTTGCCCATAT 1390
||| || ||||||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct 1641 TGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTTCTTGCACATAT 1700
Query 1391 CTTCAGCAGTAAAATCGAGGTTGCATATCAAGAAGCTATCGCGCT-AAAAAGGCAGGAAG 1449
|||||||| ||||| || |||||||| ||||||||||| || | |||||||| ||||
Sbjct 1701 CTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGC-ATGGAAAAGGCAAGAAG 1759
Query 1450 AACTTATTCGTGAGGAAGAGGAAGCGTGGTTGGCAGAAACCGAACAG-AGGGCCAAAAAA 1508
||||||||||||| ||||||||||||||| ||||||||| ||||||| |||| ||||| |
Sbjct 1760 AACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAGGG-CAAAAGA 1818
Query 1509 GGAGCAGCCGAGAGAGAGAagaaatctaagaagaaacaggcgaaacagaaacggaacaaa 1568
|||||| | || | ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1819 GGAGCATCTGAAAAAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAAAAGAACAAA 1878
Query 1569 aataaagggaaggacaaa-ag-aaaggaagaaaaggTGAGCTTTGCATCACATGAAAAGG 1626
|| ||||| ||||| || || |||| |||| |||||||| | | || || ||
Sbjct 1879 AACAAAGGAAAGGA-AATGAGGAAAG-AAGACAAGGTGAGAA---C--C-CA--AACAG- 1927
Query 1627 ATCTCGAGGAAAACCAAAACGATGAGGAAGAAAAGGATTCTGTCACG-GAGAAAGCACAC 1685
| || ||| ||| || || |||| ||| | ||| | | | || |||| |
Sbjct 1928 A-----AG-AAAGGGAAATTGA-GA--AAGA---GGAATGTGTGA-GAGCGATAGCAGAA 1974
Query 1686 TCTTCAGCTGAAAAGCCTGATACTCTTGGAGATGTGTCCGACATATCTGATTCTGTGGAT 1745
|| ||||||||||| ||||| || ||||||||||| || ||| | |||||||| || |||
Sbjct 1975 TCGTCAGCTGAAAAACCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGAT 2034
Query 1746 GGTTCGGCTGACATTGTTCAGCCTGATTTAGAAGATAGGGATAGTAGTTCTGTTCATTGG 1805
|||| ||||| || |||||| ||||| ||||||||| || |||||| |||||||||||
Sbjct 2035 AGTTCAGCTGAAATACTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGG 2094
Query 1806 GATACTG-ACGCCTTGGAAATTCATGCTGCATCAT-CAGGAGGGAGC-AGTAGAGGAAGA 1862
|| | || | |||| || ||||| || | || | |||||| | | || |||||||||
Sbjct 2095 GAAA-TGGATGCCTCAGAGGTTCATCCTCCTTC-TGCAGGAGACA-CTAGCAGAGGAAGA 2151
Query 1863 GGCA---CA----C----CC-AATGGAATTGCAGAAAGAAAGAGTCAGTCCACTATGGAT 1910
|||| | | || |||||| |||||||||||||| ||| |||||| ||||||
Sbjct 2152 GGCAATTCTTTTTCTATACCTAATGGAGTTGCAGAAAGAAAGGGTCTGTCCACAATGGAT 2211
Query 1911 GATAGTTCTTCAACTTGTTCTAATGATTCTATCCGGTCGGGGGTAACCAATGGGTCCTAC 1970
|||||||||||||| ||||||||||| || || | || |||||| |||||||||| |||
Sbjct 2212 GATAGTTCTTCAACCTGTTCTAATGACTCGATTCAATCAGGGGTAGCCAATGGGTCATAC 2271
Query 1971 CAAGGGAATGCCTTGAATTTCCGAAA-CCGGAAGTCGCCGAACAGA-GGAAAGAAT-CAA 2027
||||||||| || |||| || ||| || |||| | | || | ||||| ||| |||
Sbjct 2272 AAAGGGAATGTATTAAATTGCC-AAAGCCAAAAGTGGTTTAGCA-ATGGAAA-AATACAA 2328
Query 2028 CAAGTAAAAGCAATATCTGATGCCCACAGTTTAGGGAGTGAAACAGATG-ATCAACCTTC 2086
| || ||||| |||||||| || ||||||||| ||||||| ||| | ||||||||||
Sbjct 2329 CCAGGAAAAG---TATCTGATTCCAACAGTTTAGCCAGTGAAAAAGA-GCATCAACCTTC 2384
Query 2087 AACACTTGGGA-CAGACCC-AAAGAGTCAGAATTATTCTTCCGAGGCAAGCA-ACGTTGG 2143
|| ||||| | | ||||| ||| | ||||| ||||||| || | ||| | |||||
Sbjct 2385 AAGACTTGC-ATCTGACCCTAAAAA-TCAGAGCCATTCTTCTGATATACGCAGA-GTTGG 2441
Query 2144 TGAATCTGA 2152
|||| ||||
Sbjct 2442 TGAAGCTGA 2450
> AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:21247596-21250425
REVERSE LENGTH=1282
Length=1282
Score = 976 bits (528), Expect = 0.0
Identities = 971/1173 (83%), Gaps = 78/1173 (7%)
Strand=Plus/Plus
Query 330 GATGAGGATGATGATTATGGCCTTAAACCCTCTGAGTTATTTGGAAAATATACTTGGAAG 389
|||| ||||||||| ||||| ||||||||||||||||||| ||||||| |||| ||||||
Sbjct 101 GATGTGGATGATGAGTATGGTCTTAAACCCTCTGAGTTATATGGAAAAAATACATGGAAG 160
Query 390 ATTCCA-AAATTTTCAGAAATCAATAAAAGGGAGCATCG-TAGCGA-TAATTTTGAAGCT 446
||| | ||||||||| |||||| ||||||||| ||| |||| | | ||||||| |
Sbjct 161 ATT-AAGAAATTTTCACAAATCAGCAAAAGGGAG-TTCGCTAGC-AGTGTTTTTGAAATT 217
Query 447 GGCGGCTACAAATGGTATATTTTAATTTATCCACAAGGATGTGATGTTTTTAATCATCTC 506
|| ||||||| ||| |||||||||| |||||| |||||||||||||| |||||||||
Sbjct 218 GGAGGCTACAGTTGGCATATTTTAATGTATCCAGAAGGATGTGATGTTAGCAATCATCTC 277
Query 507 TCCTTGTTTCTCTGTGTTGCAAACTATGATAAACTTCTTCCAGGTTCTTTTGCTATCTTG 566
|| || |||||||||||||||||| ||||| | | | || || ||
Sbjct 278 TCATTATTTCTCTGTGTTGCAAACCATGAT-GA--------A----C--TT-CT-TC--- 317
Query 567 GAGGCAGGCTGGAGTCATTTCGCTCAGTTTACTATATCTGTGTTGAATAAAGATATAAAG 626
||||||||||||| || ||||||||||||||||||||| || |||||||| ||||
Sbjct 318 ----CAGGCTGGAGTCAGTTGGCTCAGTTTACTATATCTGTGATGCATAAAGATCCAAAG 373
Query 627 AAAACGAAGTTTTCAGATACACTGCACCGGTTTTGGAAGAAAGAGCATGATTGGGGATGG 686
|| | |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 374 AAGTCTAAGTTTTCAGATACGCTGCACCGGTTTTGGAAGAAAGAACATGATTGGGGATGG 433
Query 687 AAAAAGTTTATGGAGTTACCTAAGTTAAAGGACGGGTTCATAGATGATTCTGGCTGTCTT 746
|||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||||
Sbjct 434 AAAAAGTTTATGGAGTTACCGAAGTTACGGGATGGCTTCATAGATGATTCTGGCTGTCTT 493
Query 747 ACAATTGAGGCTCAAGTTCAGGTGATCAGAGAGAGGGTGGACAGACCTTTTCGCTGCCTT 806
|||||||| || ||||||||||||||||||| ||||||||| ||||||| | | ||||
Sbjct 494 ACAATTGAAACTAAAGTTCAGGTGATCAGAGACAGGGTGGACCGACCTTT-CT-T-CCTT 550
Query 807 GATTGTAGTTATAGGAGAGAACTTGTTAGGGTGTATTTGCCAAATGTGGATCAAAATTGC 866
|||| | |||| | || |||| |||||||||||||||| | |||| | || |||| || |
Sbjct 551 GATTATGGTTACAAGACAGAAATTGTTAGGGTGTATTTTCGAAATATAGAGCAAATTTTC 610
Query 867 CGGCGTTTTGTTGAAGAGAGAAGAAGCAAGCTCGGGAGGTTGATAGAGGACAAGGC-AAG 925
| || ||||| || ||||||||||||||||| | || |||||||||||||||||| ||
Sbjct 611 CTACGCTTTGTGGAGGAGAGAAGAAGCAAGCTTGAGAAGTTGATAGAGGACAAGGCCAA- 669
Query 926 ATGGACTAGCTTCGGTGTTTTCTGGTTAGGGATGGACCAAAACTCTAGGCGTCG-GATGT 984
|||||| ||||||||||||||||||||||| |||||| |||||||||||||| | |||||
Sbjct 670 ATGGACAAGCTTCGGTGTTTTCTGGTTAGGAATGGACAAAAACTCTAGGCGT-GAGATGT 728
Query 985 CTAGAGAGAAAATGGACGTAATCCTAAAAGGAGTTGTAAAACACTTTTTCGTAGAAAAAG 1044
|||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| |
Sbjct 729 CTAGAGAGAAAATGGACGTAATCCTAAAAGGATTTGTAAAACACTTTTTCATGGAAAATG 788
Query 1045 AAGTTACATCCACTT-TGGTGATGGATTCCTTGTATAGTGGGTTGAAGGCTCTTGAAGGC 1103
|||||||| || | | | |||||||| |||||||| ||||||||||| |||||||| |
Sbjct 789 TTGTTACATC-ACCTATAGCGATGGATTGCTTGTATAATGGGTTGAAGGATCTTGAAGTC 847
Query 1104 CAAACTAAGAACACGAAAGATAGGCCAAGACTGTTAGATGCCAAGGAATTGCCAGCTCCA 1163
||||||||||||| ||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct 848 CAAACTAAGAACAAGAAAGCTAGCCCAAAACTGTTAGATGACAAGGAATTGCCAGCTCCG 907
Query 1164 ATTGT-AAGCGTGGAAAAAGATATGTTCGTATTAGTTGATGATG-TGC-T-GTTACTCCT 1219
|||| || ||||| | |||||||||||||||||||||||||| || | |||||||||
Sbjct 908 TTTGTTAAA-GTGGACAGAGATATGTTCGTATTAGTTGATGATGATGTGTTGTTACTCCT 966
Query 1220 AGAGAGAGCTGC--TC-T---------TG----AG--CCATTGCCTCCAAAAGAGGAGAA 1261
|||||| ||||| || | || || ||||||||||| ||||| || ||
Sbjct 967 AGAGAGGGCTGCACTCCTAGAGAGGGCTGCTCCAGAGCCATTGCCTCCGAAAGATGATAA 1026
Query 1262 AGGTCCCCAGAACCGTACAAAGGATGG-CAATGATGGAGAAGAGGTCAACAAGGAAGCCT 1320
|| || || ||||||| ||||| || ||| |||| |||||| ||||||||||||| |
Sbjct 1027 AGCTCTTCAAAACCGTATTAAGGA-GGACAAGGATGAAGAAGATATCAACAAGGAAGC-T 1084
Query 1321 ACGAGCGTGATGAGAGACGTTTAACTGAGTTGGGTAGACGAACTGTGGAAATATTTGTTC 1380
| |||||| | |||||| ||||| |||||||||||||||||| ||||||||||
Sbjct 1085 -------T-ATGAGATATGTTTAAATGAGTGGGGTAGACGAACTGTGGAGATATTTGTTC 1136
Query 1381 TTGCCCATATCTTCAGCAGTAAAATCGAGGTTGCATATCAA-GAAGCTATCGCGCTAAAA 1439
||| ||||||||| |||| ||| | ||||||||||| ||| |||||||| ||||| |||
Sbjct 1137 TTGACCATATCTTTAGCA--AAATT-GAGGTTGCATA-CAAAGAAGCTATTGCGCTTAAA 1192
Query 1440 AGGCAGGAAGAACTTATTCGTGAGGAAGAGGAA 1472
||||||||||||||||| ||||| |||||||||
Sbjct 1193 AGGCAGGAAGAACTTATCCGTGAAGAAGAGGAA 1225
> AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:9089906-9091860
FORWARD LENGTH=1149
Length=1149
Score = 180 bits (97), Expect = 1e-43
Identities = 165/198 (83%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 571 CAGGCTGGAGTCATTTCGCTCAGTTTACTATATCTG-TGTTGAATAAAGATATAAAGAAA 629
|||| ||||||||||| ||||||||| || || ||| || |||||||||| ||||||
Sbjct 131 CAGGTTGGAGTCATTTAGCTCAGTTTTCTGTAGCTGTTG-AGAATAAAGATCCGAAGAAA 189
Query 630 ACGAAGTTTTCAGATACACTGCACCGGTTTTGGAAGAAAGAGCATGATTGGGGATGGAAA 689
| ||| || ||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct 190 TCAAAGATTGCAGATACGTTACACCAGTTTTGGAAGAAAGAGCATGATTGGGGATGGAAA 249
Query 690 AAGTTTATGGAGTTACCTAAGTTAAAGGACGGGTTCATAGATGA-TTCTGGCTGTCTTAC 748
|||||||| ||||||||||| ||| |||| || ||||||||| | || || || |||| |
Sbjct 250 AAGTTTATTGAGTTACCTAAATTACAGGATGGATTCATAGATAAGTT-TGACTCTCTTTC 308
Query 749 AATTGAGGCTCAAGTTCA 766
| || | |||||||||||
Sbjct 309 ACTTAAAGCTCAAGTTCA 326
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 175835135215
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5