BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470423 Length=464 Score E Sequences producing significant alignments: (Bits) Value AT1G04445.1 | Symbols: | C2H2-like zinc finger protein | chr1:... 364 3e-100 > AT1G04445.1 | Symbols: | C2H2-like zinc finger protein | chr1:1207344-1207862 FORWARD LENGTH=519 Length=519 Score = 364 bits (197), Expect = 3e-100 Identities = 306/355 (86%), Gaps = 21/355 (6%) Strand=Plus/Plus Query 1 ATGGCATTTTCA-AACCCCCAAGAATGTGCGATTTGTAAGAGAGTCTTCTTATCATCACA 59 ||| |||||||| || ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 ATGCCATTTTCAGAA-CCCCAAGAATGTGCGGTTTGTAAGAGAGTCTTCTTATCATCACA 59 Query 60 CCACCTGATCTCACACTTCAACGATGTTCACTCCAATCGCCACG-GTTCCACCTTCTCTT 118 ||| ||||||||||||| ||||| | ||||||||||||||| | |||||||||||||| Sbjct 60 CCAGCTGATCTCACACTACAACGCCGCTCACTCCAATCGCCA-GTATTCCACCTTCTCTT 118 Query 119 CCT---------CCG-C-CATC-GCTACACCCACCTCCTTCCGCCACTACCCGAACGTAA 166 ||| ||| | | | ||| |||||||| |||||||||||||| | ||||||| Sbjct 119 CCTCCCCCGCCGCCGCCGCCGCTGCTGCACCCACCACCTTCCGCCACTACACTAACGTAA 178 Query 167 A---CCGGAACCCTAATCCTGATTTTCAGGCGAGGAATCATTTTGACGTGAATTATTACC 223 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 179 ACGGCCGGAACCCTAATCCTGATTTTCAGGCGAGGAATCAGTTTGACGTGAATTATTACC 238 Query 224 GTAGGGGTTACTTAGACGACCACGGGAGGTTTCATAAAGGATGTTCTC-CGACGCCGGTG 282 |||| ||||||||||| || || |||||||| |||||||||| | ||| | |||||| | Sbjct 239 GTAGAGGTTACTTAGATGATCAAGGGAGGTTCCATAAAGGATCTCCTCATG-CGCCGGCG 297 Query 283 ATAACTCCGACCAGAAAATATAAGTTTTTGCTGCCAAAGATGCCGACGACGCCGA 337 || | |||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 298 ATGAGTCCGACCAGAAAATATAAGTTTTTGCTGCCAAAGATGCCGCCGACGACGA 352 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22052790533 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5