BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470450 Length=407 Score E Sequences producing significant alignments: (Bits) Value AT1G04645.1 | Symbols: | Plant self-incompatibility protein S1... 569 5e-162 > AT1G04645.1 | Symbols: | Plant self-incompatibility protein S1 family | chr1:1293770-1294263 REVERSE LENGTH=494 Length=494 Score = 569 bits (308), Expect = 5e-162 Identities = 370/400 (93%), Gaps = 4/400 (1%) Strand=Plus/Plus Query 1 AAATGGaaaaaaaTTATATAGTTTGTTTGTTCTTCTTTCTTTTATTTGGTTC-AGTTCAT 59 ||||||||||| || ||| ||||| || ||||||||||||||||||||||| ||| || Sbjct 23 AAATGGAAAAAGTTTCTATTGTTTGCTTCTTCTTCTTTCTTTTATTTGGTTCGGGTT-AT 81 Query 60 GGGGGAGTCCCACCGTTCTGGCGCGATACGGTCGTCACGATGACAAACTTGATTGGCGGT 119 ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 82 GGGGGCCTCCCACCGTTCTGGCGCGCTACGGTTGTCACGATGACAAACTTGATTGGCGGT 141 Query 120 CCACCTCTTACTATACATTGCAAATCCAAGCAAGACGATCTAGGACCTCACGTGGTGCCT 179 ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 142 CCACCTCTTACCATACATTGCAAATCCAAGCAAGACGATCTAGGAATTCACGTGGTGCCT 201 Query 180 TTCAGGCAAGAGTACCACTTCAAGTTTCAACCAAATCTTTGGAAATCAACATTGTTCTTT 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 TTCAAGCAAGAGTACCACTTCAAGTTTCAACCAAATCTTTGGAAATCAACATTGTTCTTT 261 Query 240 TGCAGTTTTCAATGGGCCAATCAATTCAAG-CGGTTTGATATATTTGATGCTCAGAGAGA 298 |||||||| ||||||| || |||||||||| | ||||||||||| ||||||||||||||| Sbjct 262 TGCAGTTTCCAATGGGACAGTCAATTCAAGTC-GTTTGATATATATGATGCTCAGAGAGA 320 Query 299 TCAAGATGTATGTGATCAGTGTCACTGGGAAATAAAACCTGATGGTCCATGCAGGCTCGG 358 ||||| | |||||||| | ||||| ||||||||||||||||||||||||||||||||||| Sbjct 321 TCAAGGTATATGTGATGACTGTCAGTGGGAAATAAAACCTGATGGTCCATGCAGGCTCGG 380 Query 359 TAAAAAGGCGAAATGTTTTCCTTGGAATTAATTTTGTACT 398 ||||||||||||||||||||||||||| ||| |||||||| Sbjct 381 TAAAAAGGCGAAATGTTTTCCTTGGAAGTAAGTTTGTACT 420 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19252547867 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5