BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470457
Length=2238
Score E
Sequences producing significant alignments: (Bits) Value
AT1G50920.1 | Symbols: | Nucleolar GTP-binding protein | chr1:... 3506 0.0
AT1G10300.1 | Symbols: | Nucleolar GTP-binding protein | chr1:... 1489 0.0
> AT1G50920.1 | Symbols: | Nucleolar GTP-binding protein | chr1:18870139-18872930
FORWARD LENGTH=2394
Length=2394
Score = 3506 bits (1898), Expect = 0.0
Identities = 2119/2227 (95%), Gaps = 9/2227 (0%)
Strand=Plus/Plus
Query 15 ATCGATAAGCGAAAATGGTTCAATACAACTTCAAGAAGATCACTGTTGTTCCCAATGGGA 74
||||||||||||| ||||||||||| || ||||||| |||||| ||||||||||||||||
Sbjct 105 ATCGATAAGCGAAGATGGTTCAATATAATTTCAAGAGGATCACAGTTGTTCCCAATGGGA 164
Query 75 AGGAGTTCGTTGACATCATCCTTTCACGGACTCAGCGTCAGACACCAACTGTTGTCCACA 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165 AGGAGTTCGTTGACATCATCCTTTCACGGACTCAGCGTCAGACACCAACTGTTGTCCACA 224
Query 135 AGGGCTACAAGATTAACCGTCTCCGTCAGTTCTACATGAGAAAGGTTAAGTACACTCAGA 194
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 AGGGTTACAAGATTAACCGTCTCCGTCAGTTCTACATGAGAAAGGTTAAGTACACTCAGA 284
Query 195 CAAACTTCCATGAGAAGCTCTCCACAATCATTGAGGAGTTTCCTCGCCTTGATCAAATCC 254
| |||||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct 285 CCAACTTCCATGCGAAGCTCTCTGCAATCATTGACGAGTTTCCTCGCCTTGAACAAATCC 344
Query 255 ATCCTTTCTATGGTGATCTTCTTCACGTGCTTTACAATAAAGATCATTACAAGCTTGCTT 314
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 345 ATCCTTTCTATGGTGATCTTCTTCATGTGCTTTACAATAAAGATCATTACAAGCTTGCTT 404
Query 315 TAGGCCAAGTGAATACTGCGAGGAACTTGATTAGCAAAATCTCCAAGGATTATGTGAAGC 374
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct 405 TAGGCCAAGTGAACACCGCCAGGAACTTGATTAGCAAAATCTCCAAGGATTATGTGAAGC 464
Query 375 TACTCAAGTATGGTGATTCTTTGTACCGGTGCAAGTGTCTTAAAGTCGCTGCTCTTGGTC 434
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 465 TACTCAAGTATGGTGATTCTTTGTACCGCTGCAAGTGTCTTAAGGTTGCTGCTCTTGGTC 524
Query 435 GTATGTGCACTGTTTTGAAGAGGATCACTCCTAGTTTGGCTTATCTCGAGCAGATCAGGC 494
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 525 GTATGTGCACTGTTTTGAAGCGAATCACTCCTAGTTTGGCTTATCTCGAGCAGATCAGGC 584
Query 495 AGCACATGGCAAGGCTTCCTTCCATTGACCCAAACACTCGTACTGTCTTGATCTGTGGAT 554
|||||||||| |||||||||||||| || || |||||||||||||||||||| ||||| |
Sbjct 585 AGCACATGGCTAGGCTTCCTTCCATCGATCCTAACACTCGTACTGTCTTGATTTGTGGTT 644
Query 555 ACCCTAATGTGGGCAAGAGTTCTTTTATGAACAAGGTTACCAGAGCTGATGTTGATGTCC 614
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 645 ACCCTAATGTTGGCAAGAGTTCTTTTATGAACAAGGTCACCAGAGCTGATGTTGACGTCC 704
Query 615 AGCCATATGCTTTCACCACCAAATCGCTCTTTGTTGGTCATACTGATTACAAGTACCTGA 674
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct 705 AGCCTTATGCTTTCACCACCAAATCCCTCTTTGTTGGTCATACTGATTACAAGTATCTCA 764
Query 675 GGTACCAAGTCATTGATACCCCTGGGATTTTGGACAGGCCATTTGAAGACCGTAACATCA 734
|||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||
Sbjct 765 GGTACCAAGTCATTGATACCCCCGGGATTTTGGATAGGCCCTTTGAGGACCGCAACATCA 824
Query 735 TTGAAATGTGCAGTATCACAGCTTTGGCCCATCTTCGAGCTGCTGTTTTGTTCTTTCTGG 794
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct 825 TTGAAATGTGCAGTATCACTGCCTTGGCCCATCTTCGAGCTGCTGTTTTGTTCTTTCTCG 884
Query 795 ACATTTCTGGATCATGTGGTTACACCATTGCTCAGCAGGCTGCTCTTTTCCACAGCATTA 854
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 885 ACATTTCTGGATCATGTGGTTACACTATTGCTCAGCAGGCTGCTCTTTTCCACAGCATCA 944
Query 855 AGTCCCTGTTTATGAACAAACCATTGGTGATTGTCTGCAACAAGACTGATTTGATGCCCA 914
||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 945 AGTCCCTCTTTATGAACAAACCCTTGGTCATTGTCTGCAACAAGACTGATTTGATGCCCA 1004
Query 915 TGGAAAACATCTCTGAAGAAGATCGGAAGCTGATTGAAGAGATGAAAG-CTGAAGCTATG 973
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 1005 TGGAAAACATCTCTGAAGAAGATCGGAAGCTGATTGAAGAGATG-AAGTCTGAAGCTATG 1063
Query 974 AAGACTGCAATGGGAGCAAGTGAAGAAGC-TGTGCTTTTGAAGATGAGTACTCTGACAGA 1032
||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct 1064 AAGACTGCAATGGGAGCAAGTGAAGAA-CAAGTGCTTTTGAAGATGAGCACTCTGACAGA 1122
Query 1033 CGAAGGTGTGATGTCTGTGAAGAATGCCGCATGTGAGAGGCTGTTAGATCAAAGGGTAGA 1092
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 CGAAGGTGTCATGTCTGTGAAGAATGCCGCATGTGAGAGGCTGTTAGATCAAAGGGTAGA 1182
Query 1093 GGCGAAGATGAAATCCAAAAAGATCAACGACCACCTAAACAGGTTCCATGTGGCTATGCC 1152
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1183 GGCCAAGATGAAATCCAAAAAGATCAACGACCACCTAAACAGGTTCCATGTGGCTATCCC 1242
Query 1153 GAAGCCTCGTGATAGCATACAAAGGCTCCCTTGCATACCTCAGGTTGTTCTGGAGGCTAA 1212
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1243 GAAGCCTCGTGATAGCATAGAAAGGCTCCCTTGCATACCTCAGGTTGTTCTGGAGGCTAA 1302
Query 1213 AGCTAAGGAAGCAGCTGCAATGGAGAAACGAAAGACAGAGAAAGATTTGGAAGAGGAAAA 1272
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1303 AGCTAAGGAAGCAGCTGCAATGGAGAAACGAAAGACTGAGAAAGATTTGGAAGAGGAGAA 1362
Query 1273 TGGTGGAGCTGGAGTTTATTCTGCTAGTCTAAAGAAGAACTACATCTTGCATCATGATGA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1363 TGGTGGAGCTGGAGTTTATTCTGCTAGTCTAAAGAAGAACTACATCTTGCAACATGATGA 1422
Query 1333 ATGGAAGGAAGACATTATGCCTGAGATTCTCGATGGTCATAATGTGGCTGACTTCATTGA 1392
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1423 ATGGAAGGAAGACATTATGCCTGAGATTCTCGATGGTCACAATGTGGCTGACTTCATTGA 1482
Query 1393 TCCAGACATTTTGGAGAGGCTTG-AGGAGTTGGAACGTGAAGAAGAGATAAGACTGGCTG 1451
||||||||||||| ||||||||| | ||||||||||||||||||| |||||| |||||
Sbjct 1483 TCCAGACATTTTGCAGAGGCTTGCA-GAGTTGGAACGTGAAGAAGGGATAAGGGAGGCTG 1541
Query 1452 GGGTTGAAGAAGCTGATATGGAGATGGATTTTGAAAAGCTTTCGGAGGAGGAGGTGAAGC 1511
||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||
Sbjct 1542 GGGTTGAAGAAGCTGATATGGAGATGGATATTGAAAAGCTTTCGGATGAGCAGCTGAAGC 1601
Query 1512 AGCTTGCTGCCATTCGAAAGAAGAGAGCTGTACTCATTCGAGAGCACAGGCTCAAGAAGA 1571
||||| ||| ||| ||||||||| |||| |||||||| | | ||||||||||||||||
Sbjct 1602 AGCTTTCTGAGATTAGAAAGAAGAAAGCTATACTCATTAAAAACCACAGGCTCAAGAAGA 1661
Query 1572 CCGTTGCACAGAACCGATCAACTGTTCCAAGAAAGTTTGATAAGGACAAGAAGTACACAA 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 CCGTTGCACAGAACCGATCAACTGTTCCAAGAAAGTTTGATAAGGACAAGAAGTACACAA 1721
Query 1632 CAAAGAGAATGGGTAGGGAGTTATCAGCTATGGGACTTGATCCGTCTTCTGCAATGAACC 1691
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1722 CAAAGAGAATGGGTAGGGAGTTATCAGCTATGGGACTTGATCCGTCTTCTGCAATGGACC 1781
Query 1692 GCGCAAGAAGCAAGTCTAGAGGGAGAAAGAGGGATCGATCAGAAGATGCGGGTAACGATG 1751
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1782 GTGCAAGAAGCAAGTCTAGAGGGAGGAAGAGGGATCGATCAGAAGATGCGGGTAATGATG 1841
Query 1752 CAATGGACGTGGATGATGAGCAACAGTCGAACAAGAAGCAGCGTGTGAGATCAAAGTCTA 1811
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1842 CTATGGACGTTGATGATGAGCAACAGTCGAACAAGAAGCAGCGTGTGAGATCAAAGTCTA 1901
Query 1812 GAACTATGTCGATATCAAGATCTCAGTCAAGGCCTCCTGCACATGAAGTGGTGCCTGGTG 1871
|| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1902 GAGCTATGTCGATATCAAGATCTCAGTCGAGGCCTCCTGCACATGAAGTTGTGCCTGGTG 1961
Query 1872 AAGGATTCAAAGACTCTACTCAGAAGAAATCGGCCATTAAGATTAGCAATAAATCTCACA 1931
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1962 AAGGATTCAAAGACTCTACTCAGAAGTTATCGGCCATTAAGATTAGCAATAAATCTCACA 2021
Query 1932 AAAAGAGAGACAAGAATGCACGTCGTGGTGAAGCTGACAGAGTTATACCAACACTTAGAC 1991
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2022 AAAAGAGAGACAAGAATGCACGTCGTGGTGAAGCTGACAGAGTTATACCAACGCTTAGAC 2081
Query 1992 CGAAACATTTGTTTTCAGGCAAGAGAGGGAAAGGAAAAACCGACAGGCGTTGATGAAACC 2051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2082 CGAAACATTTGTTTTCAGGCAAGAGAGGGAAAGGAAAAACCGACAGGCGTTGATGAAACC 2141
Query 2052 AAACAAGAGAAAACAGATGCTGCAGCCATTGAAGAATCTCTCTCAAgttttggaatttgc 2111
|||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||||
Sbjct 2142 AAACAAGAGAAAACAGATGCTGGATCCGTTGAAGAATCTCTGTCAAGTTTTGGAATTTGC 2201
Query 2112 tttacctttagtttacttgttatgttttgcatcgtttgtgttttttCGCAGACATTTATG 2171
||||||||||| |||||| |||| || |||||||||||||||||||| ||||||||||||
Sbjct 2202 TTTACCTTTAGGTTACTTTTTATATTCTGCATCGTTTGTGTTTTTTCTCAGACATTTATG 2261
Query 2172 GattattattattattatAGCTTTCCAGTGTGTTTGGAGGACGAATATTCGTTTAAGCAA 2231
||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||
Sbjct 2262 GATTATTATTATTAT-A--GCTTTCCAGTGTGTTTGGAGGACGAATGCTCGTTTAAGCAA 2318
Query 2232 ACCTTAT 2238
|||||||
Sbjct 2319 ACCTTAT 2325
> AT1G10300.1 | Symbols: | Nucleolar GTP-binding protein | chr1:3378142-3380226
FORWARD LENGTH=2064
Length=2064
Score = 1489 bits (806), Expect = 0.0
Identities = 1658/2055 (81%), Gaps = 115/2055 (6%)
Strand=Plus/Plus
Query 28 AATGGTTCAATACAACTTCAAGAAGATCACTGTTGTTCCCAATGGGAAGGAGTTCGTTGA 87
|||||| |||| || ||||||||||| || ||||| || || || || |||| |||||
Sbjct 87 AATGGTGAAATATAATTTCAAGAAGATAACAGTTGTGCCAAACGGAAAACAGTTTGTTGA 146
Query 88 CATCATCCTTTCACGGACTCAGCGTCAGACACCAACTGTTGTCCACAAGGGCT-ACAAGA 146
||| | ||||| || |||||||| |||||||||||||||||||||||||| | ||| ||
Sbjct 147 TATCGTTCTTTCCCGCACTCAGCGGCAGACACCAACTGTTGTCCACAAGGG-TGACAGGA 205
Query 147 TTAACCGTCTCCGTCAG-TTCTACATG-AGAAAGGTTAAGTACACTCAG-A-CAAACTTC 202
|| | |||||| || ||||||||| |||| || |||| || ||| | |||||||
Sbjct 206 TTTGCAAACTCCGT-AGCTTCTACATGCGGAAA-GTGAAGTTCA--CAGAATCAAACTTT 261
Query 203 CATGAGAAGCTCTCCACAATCATTGAGGAGTTTCCTCGCCTTGATCAAATCCATCCTTTC 262
| ||||||||||| | || || || |||||||||||||| | |||| || || |||
Sbjct 262 AACGAGAAGCTCTCTGCCATTATCGACGAGTTTCCTCGCCTCAAGGAAATTCAACCCTTC 321
Query 263 TATGGTGATCTTCTTCACGTGCTTTACAATAAAGATCATTACAAGCTTGCT-TTAGGCCA 321
|||| ||||||||||| |||||||||||||||||||| |||||||| ||| || || ||
Sbjct 322 TATGAAGATCTTCTTCATGTGCTTTACAATAAAGATCACTACAAGCTCGCTCTT-GGTCA 380
Query 322 AGTGAATACTGCGAGGAACTTGATTAGCAAAATCTCCAAGGATTATGTGAAGCTACTCAA 381
||| |||||||||| |||| ||| ||||||||| ||| |||||||||||||||| | ||
Sbjct 381 AGTCAATACTGCGAAGAACAAGATCAGCAAAATCGCCATGGATTATGTGAAGCTATTGAA 440
Query 382 GTATGGTGATTCTTTGTACCGGTGCAAGTGTCTT-AAAGTCGCTGCTCTTGGTCGTATGT 440
| ||||||||||| ||||||| |||||||| ||| ||||| ||||||||||| |||||||
Sbjct 441 GCATGGTGATTCTCTGTACCGATGCAAGTG-CTTAAAAGTGGCTGCTCTTGGGCGTATGT 499
Query 441 GCACTGTTTTGAAGAGG-ATCACTCCTAGTTTGGCTTATCTCGAGCAGATCAGGCAGCAC 499
| |||||| |||| ||| || |||||||||||||||||| || ||| | ||||| |||
Sbjct 500 GTACTGTTATGAA-AGGTATTGGTCCTAGTTTGGCTTATCTTGAACAGGTTAGGCAACAC 558
Query 500 ATGGCAAGGCTTCCTTCCATTGACCCAAACACTCGTACTGTCTTGATCTGTGGATACCCT 559
|| |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||| |||
Sbjct 559 ATTGCAAGGCTTCCTTCGATTGATCCAAACACTCGAACTCTCTTGATCTGTGGATGTCCT 618
Query 560 AATGTGGGCAAGAGTTCTTTTATGAACAAGGTTACCAGAGCTGATGTTGATGTCCAGCCA 619
|||||||| |||||||||||||||||||| ||||| |||||||| || | ||| ||||||
Sbjct 619 AATGTGGGAAAGAGTTCTTTTATGAACAAAGTTACAAGAGCTGACGTAGCTGTTCAGCCA 678
Query 620 TATGCTTTCACCACCAAA-TCGCTCTTTGTTGGTCATACTGATTACAAGTACCTGAGGTA 678
|||||||||| || |||| || |||||| ||||||||||||||||||||| |||||||
Sbjct 679 TATGCTTTCA-CAACAAAGTCACTCTTTCTTGGTCATACTGATTACAAGTGTTTGAGGTA 737
Query 679 CCAAGTCATTGATACCCCTGGGATTTTGGACAGGCCATTTGAAGACCGTAACATCATTGA 738
|| || |||||||| || ||| ||||||| ||| | ||||||||||||| ||||||||
Sbjct 738 TCAGGTGATTGATACACCGGGGCTTTTGGATAGGGAAATTGAAGACCGTAATATCATTGA 797
Query 739 AATGTGCAGTATCACAGCTTTGGCCCATCTTCGAGCTGCTGTTTTGTTCTTTCTGGACAT 798
| |||| || ||||| || ||||| ||| | ||||||||||||||||||||||| || ||
Sbjct 798 ATTGTGTAGCATCACCGCGTTGGCTCATATCCGAGCTGCTGTTTTGTTCTTTCTTGATAT 857
Query 799 TTCTGGATCATGTGGTTACACCATTGCTCAGCAGGCTGCTCTTTTCCACAGCATTAAGTC 858
||| || || ||||||||||||||||||||||||||| ||||||| |||| ||| |||||
Sbjct 858 TTCGGGTTCTTGTGGTTACACCATTGCTCAGCAGGCTTCTCTTTTTCACAACATAAAGTC 917
Query 859 CCTGTTTATGAACAAACCATTGGTGATTGTCTGCAACAAGACTGATTTGATGCCCATGGA 918
|||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 918 TGTGTTCAAGAACAAACCGTTGGTGATTGTCTGCAACAAGACTGATTTGATGCCTATGGA 977
Query 919 AAACATCTCTGAAGAAGATCGGAAGCTGATTGAAGAGATGAAAGCTGAAGCTATGAAGAC 978
||| | |||||||||||| |||| || |||||||||||||||| |||||||||||||||
Sbjct 978 GAACTTATCTGAAGAAGATAGGAAACTTATTGAAGAGATGAAAGATGAAGCTATGAAGAC 1037
Query 979 TGCAATGGGAGCAAGTGAAGAAGCTGTGCTTTTGAAGATGAGTACTCTGACAGACGAAGG 1038
|| ||||||||||||||||||||| ||| ||||| ||||||||||| |||| || |||||
Sbjct 1038 TGAAATGGGAGCAAGTGAAGAAGCAGTGATTTTGGAGATGAGTACTTTGACTGAAGAAGG 1097
Query 1039 TGTGATGTCTGTGAAGAATGCCGCATGTGAGAGGCTGTTAGATCAAAGGGTAGAGGCGAA 1098
||||||||| ||| || ||| | |||||| ||||||| ||||||
Sbjct 1098 TGTGATGTC----AAG---GC----TGT-------T---AGATCAGAGGGTAGCGGCGAA 1136
Query 1099 GATGAAATCCAAAAAGATCAACGACCACCTAAACAGGTTCCATGTGGCTATGCCGAAGCC 1158
||||||||| ||||||||| || ||| | ||||||||||||||||| |||||||||
Sbjct 1137 GATGAAATCGAAAAAGATCGGTGATCACTTGAACAGGTTCCATGTGGCGATGCCGAAGAG 1196
Query 1159 TCGTGAT-AGCATACAAAGGCTCCCTTGCATACCTCAGGTTGTTCTGGAGGCTAAAGCTA 1217
||||||| | || | ||||||||||||| ||||||||||| | |||| | ||| |
Sbjct 1197 TCGTGATGACCA-AGAAAGGCTCCCTTGTATACCTCAGGTAG--CTGGTG---AAA---A 1247
Query 1218 AGGAAGCAGCTGCAATGGAGAAACGAAAGACAGAGAAAGATTTGGAAGAGGAAAATGGTG 1277
||| | ||| | || ||| ||| || || || ||||||||| ||||||||||
Sbjct 1248 -GGA-GAAGC-G-AA---AGAC-CGA--GA-AG-GA----TTTGGAAGATGAAAATGGTG 1291
Query 1278 GAGCTGGAGTTTATTCTGCTAGTCTAAAGAAGAACTACATCTTG-CATCATGATGAATGG 1336
||||||| |||||||||||||||||||||||||||||||| ||| | | | || ||||||
Sbjct 1292 GAGCTGGGGTTTATTCTGCTAGTCTAAAGAAGAACTACATTTTGGC-TAAAGAAGAATGG 1350
Query 1337 AAGGAAGACATTATGCCTGAGAT-TCTCGA-TGGTCATAATGTGGCTGACTTCATTGATC 1394
||||| || || || |||||||| | | || || ||||||||| ||||| || |||||
Sbjct 1351 AAGGATGATATAATACCTGAGATCTGT-GACTG-TCATAATGTTGCTGATTTTGTTGATT 1408
Query 1395 CAGACATTTTGGAGAGGCTTGAGGAGTTGG-AACGTGAAGAAGAGA-TAAG-ACTGGCTG 1451
||||||| ||| | ||||||||||| ||| || |||||||| || | || | ||| |
Sbjct 1409 CAGACATCTTGAATAGGCTTGAGGAATTGACAA-GTGAAGAA-AGTCTTAGGAA-GGCAG 1465
Query 1452 GGGTTGAAGAAGCTGATATGGAGATGGATTTTGAA-AAGCTTTCGGAGGAGGAGGTGAA- 1509
|| ||||||| || | | ||||| || ||| || ||| | ||| ||||| |||
Sbjct 1466 AGGAAGAAGAAGTTGGTTTTGAGATTGAAGGCGAAGAA-CTTACAGAGAAGGAGAAGAAT 1524
Query 1510 GCAGCTTG-CTGCCATTCGAAAGAAGAGAGCTGTACTCATTCGA-GAGCAC-AGGCTCAA 1566
| | ||| |||| ||||| ||||||| |||| | || ||| || ||| | || || ||
Sbjct 1525 G-AT-TTGGCTGCTATTCGTAAGAAGAAAGCTTTGCTTATT-GAAGAG-AGTAGACTTAA 1580
Query 1567 GAAGACCGTTGCACAGAACCGATCAACTGTTCCAAGAAAGTTTGATAAGGACAAGAAGTA 1626
||||| | |||||| ||| || || ||||||||||||||||||| ||||| |||||||
Sbjct 1581 GAAGAGCAATGCACAAAACAGAGCAGCTGTTCCAAGAAAGTTTGACAAGGATAAGAAGTT 1640
Query 1627 CACAACAAAGAGAATGGGTAGGGAGTTATCAGCTATGGGACTTGATCCGTCTTCTGCAAT 1686
|||| |||||||||||||| ||||||||| || | || ||||||||||||||||| |
Sbjct 1641 TACAAGGAAGAGAATGGGTAGAGAGTTATCATCTCTTGGTCTTGATCCGTCTTCTGCTTT 1700
Query 1687 GAACCGCGCAAGAAGCAAGTCTAGAGGGAGAAAGAGGGATCGATCA-GAAGATGCGGGTA 1745
|||||| |||||||||||||||||||| ||||||||||| | | | || ||| | |||
Sbjct 1701 GAACCGTGCAAGAAGCAAGTCTAGAGGCAGAAAGAGGGAAAGGT-ATGATGATTTGAGTA 1759
Query 1746 ACGATGCAATGGACGTGGATG--A-TGA-G-----CAACAGTC-GAACAAGAAGCA-GCG 1794
||||||||||||| ||||||| | ||| | ||||| | ||| |||||| | | |
Sbjct 1760 ACGATGCAATGGATGTGGATGTGAATGATGATGAGCAACA-TAAGAAGAAGAAG-ATGTG 1817
Query 1795 TGTGAGATC-AAAGTCTAGAACTATGTCGATATCAAGATCTCAGTCAAGGCCTCCTGCAC 1853
| ||||||| ||| || ||| || |||| | ||||||||| ||||||||| || ||
Sbjct 1818 TCTGAGATCTAAA-TCAAGATCTTTGTCAAGATCAAGATCAGTGTCAAGGCCACC---AC 1873
Query 1854 ATGAAGTGGTGCCTGGTGAAGGATTCAAAGACTCTACTCAGAAGA--AATCGGCCATTAA 1911
|||| || || ||||||||||| |||||||| ||| | ||||||| || ||| |||||
Sbjct 1874 ATGAGGTTGTACCTGGTGAAGGCTTCAAAGATTCTTCACAGAAGATTAA--GGCAATTAA 1931
Query 1912 GATTAG-CAATAAATCTCACAAAAAGAGAGACAAGAATGCACGTCGTGGTGAAGCTGACA 1970
|||| | || |||||||||| |||||| |||||| |||||||||||| ||||| ||||
Sbjct 1932 GATTGGACAC-AAATCTCACAGAAAGAGGGACAAGGCTGCACGTCGTGGAGAAGCAGACA 1990
Query 1971 GAGTTATACCAACACTTAGACCGAAACATTTGTTTTCAGGCAAGAGAGGGAAAGGAAAAA 2030
||||||||||| | |||| ||| ||||| ||||||||||| || ||||| || |||||||
Sbjct 1991 GAGTTATACCATCTCTTAAACCAAAACACTTGTTTTCAGGGAAAAGAGGCAATGGAAAAA 2050
Query 2031 -CCGACAGGCGTTGA 2044
|| | |||||||||
Sbjct 2051 ACCAA-AGGCGTTGA 2064
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111043605540
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5