BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470470
Length=3288
Score E
Sequences producing significant alignments: (Bits) Value
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protea... 2497 0.0
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protea... 320 5e-86
> AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease
2 | chr1:1369054-1373101 REVERSE LENGTH=3418
Length=3418
Score = 2497 bits (1352), Expect = 0.0
Identities = 1677/1830 (92%), Gaps = 37/1830 (2%)
Strand=Plus/Plus
Query 1 CACTAGCCCCTTTGTCTGCCCCTCTTTCGGAGCGATT-ATTTCACATTGTTTCGTCGGAC 59
||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 29 CACTAACCCCTTTGTCTGCCCCTCTTTCGGAGCGATTCTTTTCTCATTCTTTCGTCGGAC 88
Query 60 TCTCTGCCTCCTCCTTTTGACGGCGGCA-GAA--ACAACG-AAGCACGCACTAATAACAC 115
|||||| | |||||||||||||||||| || |||| | ||||| ||| | ||||||
Sbjct 89 TCTCTG--T-CTCCTTTTGACGGCGGCACCAACGACAAAGCAAGCAAGCAGTGATAACAT 145
Query 116 CTATCTCTTTCTCCGTCTAAACCATTTGATTAGTCTAGATCCCAATTCTTCGAGTATCGA 175
|||||| | ||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 146 CTATCTATCTCTCCGTCTAAACCAATTGATTAGGCTAGATCCCAATTCTTCGAGTATCGA 205
Query 176 TTCTTCTTCAATCCTTTTCATGTTAATATCCTCCT-AAGCAGCAATCT-TTGGGTTTTTA 233
|||||||||||||||||| |||| ||||| ||||| ||||||||| || ||||||| ||
Sbjct 206 TTCTTCTTCAATCCTTTTTATGTGAATATTCTCCTAAAGCAGCAACCTCTTGGGTTCTTC 265
Query 234 TTCCATTAC-AGTAACTGATGGGGAAGAAAGCGAAGAAGAAGGCCCGAGCACCAACAAAG 292
|| | || | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 266 TT-C-TT-CTGGTAACTGATGGGGAAGAAAGCGAAGAAGAAGGCCCGAGCTCCAACAAAG 322
Query 293 GAGATTCAGACCACAGAATTTTCCATGAAGGTCTCTGAAGAGCCGCCTAGTCAAGCCGGA 352
||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||
Sbjct 323 GAGATTCAGACCATGGAAATTTCCAAGAAGGTCTCAGAAGAGCCGCCTAGTCAAGCCGGG 382
Query 353 GAAATAGCTGAGGGTGACGTTAAAGCAGTTAAGGAGACACAAGCTTGTGTGCATTTCGAT 412
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 GAAATTGCTGAGGGTGACGTTAAAGCAGTTAAGGAGACACAAGCTTGTGTGCATTTCGAT 442
Query 413 AAGGGTCTTAATTTGGAGAAAGTGTTGGATAAGATTAAGTCTTCCCGGCAGATTAAGTGT 472
|||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 443 AAGGCTCTTAATTTGGAGAAGGTGTTGGATAAGATTAAGTCATCCCGGCAGATTAAGTGT 502
Query 473 GAAGAATGCAAGGAAGGAGTGTATGGAAAGAGAGGAACTAAAGCAAAGGGCAATAAGGGG 532
| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 503 GCAGAATGCAATGAAGGAGTGTATGGAAAGAGAGGAACTAAAGCAAAGGGCAGTAAAGGG 562
Query 533 AAAAAAGATTTTTCTTCATCTG-------A--T-A-AA-AAAGCCATTTGGCTATGTTTG 580
|| || ||||||||||| |||| | | | || |||||||||||||||||||||
Sbjct 563 AAGAAGGATTTTTCTTCTTCTGATCCAAAATCTAATAACAAAGCCATTTGGCTATGTTTG 622
Query 581 GAATGTGGCTGTTATGTTTGTGGAGGTGTTGGTTTACCAAATGGAGCTCAAAGTCATGTT 640
||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 623 GAATGTGGCTGTTATGTTTGTGGAGGTGTTGGTTTACCAAATGGACCTCAGAGCCATGTT 682
Query 641 TTGAGGCATACCAGAGTGACGCGTCACCGATTGGTGATTCAATGGGAAAATCCTCAGTTA 700
||| | || | ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 683 TTGCGACACAGCAGAGTGACACGTCACCGATTGGTGATTCAATGGGAAAATCCTCAGTTA 742
Query 701 AGATGGTGTTTCCCGTGCC-GTTCGCTTCTCCCTGTTGAAAAAGATGATAATGGTGAGAA 759
||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||
Sbjct 743 AGATGGTGTTTCCCGTGCCAGTT-GCTTCTCCCTGTTGAAAAAGAAGATAATGGCGAGAA 801
Query 760 GAAAGATGTGCTGTCTGAGGTTGTTAAATTTATTAAAGGACGATCTTTGAACAATTTAGC 819
||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 802 GAAAGATGTACTGTCAGAGGTTGTTAAATTGATTAAAGGACGATCTTTGAACAATTTAGC 861
Query 820 TTCATCTGATATCGAAGATCAGTGCTCAGGAAGTGGCAGTATCACAAGTGATATCAAATT 879
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 862 TTCATCCGATATCGAAGATCAGTGCTCAGGAAGTGGCAGTATCACTAGTGATATCAAACT 921
Query 880 AGAAGGTGCTGCTGTGACCAGTGATATAGAAGCAAGAGAGGGTTATGTTGTGCGAGGTTT 939
|||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 922 AGAA-G-G-TGCTGTGACCAGTGATATAGAAGCAAGAGATGGTTATGTTGTGCGAGGTTT 978
Query 940 AGTTAACCTTGGGAACACATGTTTCTTTAATTCGATAATGCAGAATCTTCTTTCTTTGGA 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 979 AGTTAACCTTGGGAACACATGTTTCTTTAATTCGATAATGCAGAATCTTCTTTCTTTGGA 1038
Query 1000 TCGGTTACGCGATCATTTCTTGAAGGAGAATGGGTCTGGGGCCGGTAGGCCTCTTGCGTC 1059
||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||
Sbjct 1039 TCGGTTACGCGATCACTTCTTGAAAGAGAATGGGTCTGGGGTCGGTGGGCCTCTTGCGTC 1098
Query 1060 TTCCCTGAGGAAATTATTCGCTGAAACGAAACCAGAGGCAGGCTTGAAGAGTGTGATAAA 1119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 TTCCCTGAGGAAATTATTCACTGAAACGAAACCAGAGGCAGGCTTGAAGAGTGTGATAAA 1158
Query 1120 TCCTAGAGTATTTTTTGGGTCTTTCTGTTCTAAGGCACCTCAGTTTCGTGGATATGACCA 1179
|||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 1159 TCCTAGAGCCTTTTTTGGGTCTTTCTGTTCTAAGGCACCCCAGTTCCGGGGATATGACCA 1218
Query 1180 GCATGATAGCCACGAGTTGCTACGCTGTTTGCTAGATGCGTTAAGCACCGAAGAATCGGC 1239
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1219 GCATGATAGCCACGAGTTGCTACGCTGTTTGCTAGATTCGTTGAGCACCGAAGAATCGGC 1278
Query 1240 TTTGAGAAAGAAGCATGGTGTTTCTGATAATGGTGAGAAATATACTACTCTCGTAGATTC 1299
||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||| ||
Sbjct 1279 CTTGAGAAAGAAGCGTGGTGTTTCTGATAATGATGAGAAATCTACTACTCTCATAGAATC 1338
Query 1300 TGTATTTGGAGGGGAAACGTCGAGCATTGTTCGTTGTATGGAGTGCGGGCATTCCTCCAA 1359
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1339 TGTATTTGGAGGCGAAACGTCGAGCATTGTTAGTTGTATGGAGTGCGGGCATTCCTCAAA 1398
Query 1360 AGTCTATGAGCCATTTTTGGATCTCTCCTTACCCGTACCATTCAAGAAAAGCCCTCCTAA 1419
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1399 AGTCTATGAACCATTTTTGGATCTCTCCTTACCCGTACCATTCAAGAAAAGCCCTCCTAA 1458
Query 1420 AAAGCCACAACCTGTTTCTCGAGCAAGAAAAGCTAAGCTTCCACCAAAAAGAGTCCCTAA 1479
||| |||||||||||||||||||||| |||||||||||||||||| || |||||||| ||
Sbjct 1459 AAAACCACAACCTGTTTCTCGAGCAAAAAAAGCTAAGCTTCCACCTAAGAGAGTCCCAAA 1518
Query 1480 GAATGTGTCAAAAGTAAGTAAGATTTCAAATGTTCACCCAAGTAAGGCTCTTTCAGAACT 1539
|||||||||||||||||||||| ||||||| |||| |||| ||| || |||||| |||||
Sbjct 1519 GAATGTGTCAAAAGTAAGTAAGGTTTCAAAAGTTCTCCCAGGTATGGTTCTTTCGGAACT 1578
Query 1540 GAATTCT-CCGGGAAAAGCTTTGGTTGTCATAGCTGATTCAGACACATCGTGTTCTAGTT 1598
||| ||| |||| |||| || ||| ||||| ||||||||| || ||||| ||||| ||||
Sbjct 1579 GAACTCTTCCGG-AAAATCTATGGCTGTCACAGCTGATTCGGATACATCCTGTTCCAGTT 1637
Query 1599 TTGCACCCCTTGATAATGGTCCGGTTTTAGAGACTCTTTCAGTTCTAACCGCT-GACAAT 1657
| ||||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||
Sbjct 1638 TAGCACCCCTTGATAATGGTCCGGTTTTAGAAACTCCTTCAGTTCTAACC-CTTGACAAT 1696
Query 1658 AAGCAGGCCTCAGAAAGTGTAACACAAAGTGATACTGGTTTTGATAGCTTCTGGTTGGAT 1717
|| |||||||||||||||| | ||||||||||||||||||| ||| ||| ||||||||||
Sbjct 1697 AATCAGGCCTCAGAAAGTGCATCACAAAGTGATACTGGTTTCGATGGCTCCTGGTTGGAT 1756
Query 1718 ATTATTGGACCAGAAAACTCTGGAGATGAGACGTATTTGGATATGCAAGAAGATGGTACT 1777
|||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1757 TTTATCGGACCAGAAACCTCTGGAGATGAGACGAATTTGGATATGCAAGAAGATGGTATT 1816
Query 1778 GATAATGTC-TCTACAACTGAGGGTGATCA 1806
||||||||| | |||| |||||| | ||||
Sbjct 1817 GATAATGTCAT-TACAGCTGAGGTTAATCA 1845
Score = 2172 bits (1176), Expect = 0.0
Identities = 1343/1421 (95%), Gaps = 22/1421 (2%)
Strand=Plus/Plus
Query 1845 ATGTACAAGCTATGCAGTCTGATGAAGGCCCAGTTACGAGCGGTATTTCTGCTGAATTCA 1904
|||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||
Sbjct 1980 ATGTACAAGCTATGCAGTCTGATGAATGCCCAGCTACAAGTGGTATTTCTGCTGAATTCA 2039
Query 1905 TTCAAGCTAGTTGCATCAGTTGTGATCCTGGTATAGGGGAAAGTTCTTCCTCGGTGAATC 1964
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 GTCAAGCTAGTTGCATTGGTTGTGATCCTGGTATAGGGGAAAGTTCTTCCTCGGTGAATC 2099
Query 1965 CTTGGGACGAGGAAGAGCTTCCTTTGGTGGTTGCAGATTCGCAAATTCTGTACATGCCAT 2024
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2100 CTTGGGACGAGGAAGAGCTTCCTTTGGTGGTTGCAGATTCGCAAATTTTGTACATGCCAT 2159
Query 2025 ACAACGAAATATCCTGTAATGATAAATCAGTTGCTGAAGGTGAGTTTGAAGCTTCATCTT 2084
|||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 2160 ACAAAGAAATATCCTGTAATGATAAATCAGTTG---AAGGTGAGTGTGAAGCTTCATCTT 2216
Query 2085 CATTTGGTACTGGTGATCATGAACCACAAAACAGTGATTTTGTTGATTTTGGCGGTTTAT 2144
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 CATTTGTTACTGGTGATCATGAACCACAAAACAGTGATTTTGTTGATTTTGGCGGTTTAT 2276
Query 2145 TTGATGAGCCCGAGACTACCGAAGGACCTGTCTTTGGACCTCCTTCCAAGGCTGAAGCTT 2204
|||||||||| |||||||| || |||||||| |||||||||||||||||||||||||| |
Sbjct 2277 TTGATGAGCCTGAGACTACTGAGGGACCTGTTTTTGGACCTCCTTCCAAGGCTGAAGCCT 2336
Query 2205 CGGGAGTTGGTATTATGGCGTTCAGCAGCGAGTCTGATCCTGAAGAAATCGATGATTCGG 2264
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2337 CGGGAGTTGGTTTTATGGCGTTCAGCAGCGAGTCTGATCCTGAAGAAATCGATGATTCGG 2396
Query 2265 ATTCACCGGTGTCTGTAGAAAGGTGTTTGGCTCATTTCACAAAGCCTGAGATATTGTCGG 2324
||| ||||||||||||||| |||||||||| |||||||||||| | ||||||| |||| |
Sbjct 2397 ATTTACCGGTGTCTGTAGAGAGGTGTTTGGGTCATTTCACAAAACATGAGATACTGTCAG 2456
Query 2325 ATGACAATGCTTGGCACTGCGAGAACTGTTCAAAGAACCTGAAACTCCAACGGTTGAGAG 2384
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 ATGACAATGCTTGGAACTGCGAGAACTGTTCAAAGAACCTGAAACTCCAACGGTTGAGAG 2516
Query 2385 AAAAGC-AAAAGTCCAA-GAAAGATGAATTGAGATCAAGCAACACCAGCAACGGATGGGT 2442
|||||| |||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 2517 AAAAGCGAAAA-TCCAATGAA-GATGAATCGAGATCAAGCAACACCAGCAACGGATGGGT 2574
Query 2443 GAAAGAAAATGAAAATGAAGGTTTTGGAGAAACTGATATTTTGGCTGTTAAACAAGATCC 2502
||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2575 GAAAGAAAATGAAGATGAAGGTTTTGGAGAAACCGAAATTTTGGCTGTTAAACAAGATCC 2634
Query 2503 AAATGATACTTGTTGTGTCAAGGATCATAGCTCTAATGGAAGAAAAGCTACGGGG-TCTC 2561
|||||||||| ||||||||||||||||||||||| |||||||||||||| || || | ||
Sbjct 2635 AAATGATACTAGTTGTGTCAAGGATCATAGCTCTGATGGAAGAAAAGCTGCGAGGAT-TC 2693
Query 2562 ACTCAGCTGATGAAAGTGAATCCAAAGGGACTCAAGATGAAGACGAAGATTCTGAGAAAG 2621
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2694 ACTCAGCTGATGAAAGTGAATCCAAAGGAACTCAAGATGAAGACGAAGATTCTGAGAAGG 2753
Query 2622 TGATCACAGTGAAGAGAGATGCAACTAAAAGAGTACTTATAAACAAAGCCCCACCTGTCC 2681
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2754 TGATTACAGTGAAGAGAGATGCAACTAAAAAAGTACTTATAAACAAAGCCCCACCTGTCC 2813
Query 2682 TAACCATTCATCTAAAGCGATTCAGCCAAGATTTGCGTGGTAGGCTAAGTAAGTTAAATG 2741
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2814 TAACCATTCATCTAAAACGATTCAGCCAAGATTTGCGTGGTAGGCTAAGTAAATTAAATG 2873
Query 2742 GTCATGTTGCTTTCCAAGAGGTCATCGATCTTCGACAATATATGGACACAAGGTGTAGCG 2801
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2874 GTCATGTTGCTTTCAAAGAGGTCATCGATCTTCGACAATATATGGACTCAAGGTGTAGCG 2933
Query 2802 GAGAAGACCCGCCCGTTTACAGACTGGCTGGATTGGTGGAGCATTCAGGGACGATGAGAG 2861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2934 GAGAAGACCCGCCCGTTTACAGACTGGCTGGATTGGTGGAGCATTCAGGGACGATGAGAG 2993
Query 2862 GAGGTCATTATGTGGCATATGTTAGAGGAGGTCAGCGAGTTAAAGAGACTGATTCCTCCT 2921
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2994 GAGGTCATTATGTGGCGTATGTTAGAGGAGGTCAGCGGGTTAAAGAGACTGATTCCTCCT 3053
Query 2922 CCACTGTGTGGTATAACGTAAGCGATGCACATGTTCGTCAGGTTTCATTGGAAAAGGTTC 2981
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3054 CCACTGCGTGGTATAACGTAAGCGATGCATATGTTCGTCAGGTTTCATTGGAAAAGGTTC 3113
Query 2982 TGCATTCTGAAGCTTATATCTTGTTCTATGAACGGATCTTCTGACGAGACTGAGAAATGA 3041
||||||||||||| |||||||||||||||||||||||||||| || ||| |||||||| |
Sbjct 3114 TGCATTCTGAAGCGTATATCTTGTTCTATGAACGGATCTTCTCACAAGAATGAGAAATTA 3173
Query 3042 TTTTGTTTCCATTATACTGAAAAAGGAAAGAAGAAAACCAGTTTTGATCTTCTTCCCTAC 3101
|||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||
Sbjct 3174 TTTTGTTTCCATTA--C-GAAA--GGAAAGAAGAAAACCAGTTTTGATCTTCTTCCTTAC 3228
Query 3102 A---GCTTGTGCTGGGAAAGTTTTTGACGATCACATTAGATCAAATACCATTAATTTTGT 3158
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3229 AATAGCTTTTGCTGGGAAAGTTTTTGACGATCACATTAGATCAAATACCATTAATTTTGT 3288
Query 3159 TTTTTCTTATTGTATTTTGGAGTCATGAAAATTTCATTATATGTATCA---GAAACATGT 3215
||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |
Sbjct 3289 TTTTTCTTATTATATTTTGGAGTCATGAAA-TTTCATTATATGTATCATCAGAAACATTT 3347
Query 3216 CTGAAAATATTTGAGCCTCTCAAATGAGTTACATTCTATTT 3256
|||||| |||||||||||||| ||||||||||||||| |||
Sbjct 3348 CTGAAAGTATTTGAGCCTCTCCAATGAGTTACATTCT-TTT 3387
> AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease
1 | chr2:13898431-13901870 REVERSE LENGTH=3252
Length=3252
Score = 320 bits (173), Expect = 5e-86
Identities = 432/553 (78%), Gaps = 34/553 (6%)
Strand=Plus/Plus
Query 900 GTGATATAGAAGCAAGAGAGGGTTATGTTGTGCGAGGTTTAGTTAACCTTGGGAACACAT 959
||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||
Sbjct 572 GTGGTATAGAAGCAAGAGATGGTTATGCTGTAAGAGGTTTAGTTAACCTTGGGAACACAT 631
Query 960 GTTTCTTTAATTC-GATAATGCAGAATCTTCTTTCTTTGGATCGGTTACGCGATCATTTC 1018
||||||||||||| | |||||||||| ||||| |||||||||| ||||| || || |||
Sbjct 632 GTTTCTTTAATTCTG-TAATGCAGAACCTTCTCTCTTTGGATCAATTACGTGAGCACTTC 690
Query 1019 TTGAAGGAGAATGGGTCTGGG-GCCGGTAGGCCTCTTGCGTCTTCCCTGA-GGAAATTAT 1076
||||| ||| || |||| || || | ||||| | |||||||||| |||| | ||
Sbjct 691 TTGAAAGAGGATCTATCTGTTAGC-GG--G-CCTCTCGTTTCTTCCCTGAAGGAACT-AT 745
Query 1077 TCGCTGAAACGAAAC-CAGAGGCAGGC-TTGA-AG-AGTGTGATAAATCCTAGAGTATTT 1132
| |||||| | ||| |||||||| || || || | || ||||||||| |||| | |
Sbjct 746 TTGCTGAATC-AAATTCAGAGGCAAGCGTTTTTAGGAATGAGATAAATCCAAGAG-ACCT 803
Query 1133 TTTGGGT-CTTTCTGTTCTAAGGCACCTCAGTTTCGTGGATATGACCAGCATGATAGCCA 1191
||| | || |||||||| |||| || || ||| | |||||| | |||||||| || ||
Sbjct 804 TTTCTTTTCTGTCTGTTCTCAGGCTCCCCAATTTAGGGGATATCAGCAGCATGACAGTCA 863
Query 1192 CGAGTTGCTACGCTGTTTGCTAGATGCGTTA-AGCACCGAAGAATCG-GCTTTGAGAAAG 1249
||||||||| | |||||| | |||| ||| |||| ||||||||| || | ||| |||
Sbjct 864 TGAGTTGCTAAGATGTTTGTTGGATG-GTTTGAGCATTGAAGAATCGAGCCT-GAGGAAG 921
Query 1250 AAGCATGGTGTTTCTGATAATGGTGAGA-----A-ATAT-A----C-TACTCTCGTAGAT 1297
|||| |||||||||||||| | ||| | | |||| | | ||||||| |||||
Sbjct 922 AAGCTTGGTGTTTCTGATAGTAATGACAGTTCTACATATCAGAAACCTACTCTCATAGAT 981
Query 1298 TCTGTATTTGGAGGGGAAACGTCGAGCATTGTT-CGTTGTATGGAGTGCGGGCATTCCTC 1356
|||||||||||||| |||| ||||||| |||| | |||| | || ||||| |||| |||
Sbjct 982 TCTGTATTTGGAGGTGAAATATCGAGCACTGTTTC-TTGTTTAGAATGCGGACATTTCTC 1040
Query 1357 CAAAGTCTATGAGCCATTTTTGGATCTCTCCTTACCCGTACCATTCAAGAAAAGCCCTCC 1416
||||| ||||| || ||| |||||||||| |||||||| || | || |||| |||||
Sbjct 1041 AAAAGTGTATGAACCCTTTATGGATCTCTCTTTACCCGTTCCGTCCATGAAACTTCCTCC 1100
Query 1417 TAAAAAGCCACAA 1429
|||||||| ||||
Sbjct 1101 TAAAAAGCAACAA 1113
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 163594401123
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5