BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470474 Length=1829 Score E Sequences producing significant alignments: (Bits) Value AT1G04890.1 | Symbols: | Protein of unknown function, DUF593 |... 2340 0.0 > AT1G04890.1 | Symbols: | Protein of unknown function, DUF593 | chr1:1380382-1382599 REVERSE LENGTH=2023 Length=2023 Score = 2340 bits (1267), Expect = 0.0 Identities = 1695/1887 (90%), Gaps = 87/1887 (5%) Strand=Plus/Plus Query 1 CAAGAGAAGAACCAAATGTGATTAACAACAAGGAACTTGGTAGATTTGATCTGATGACCG 60 ||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 1 CAAGAGACGAACCAAATGTGATTAACAATAAGGAACTTGGTAGATTTGATCTTATGACCG 60 Query 61 TTCAGGGCATGAAAGGCAAACGTTTTGTTACACGAAGATCAAGAAACGGTCTTAAAAACC 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 TTCAGGGCATGAAAGGCAAACGTTTTGTTACAAGAAGATCAAGAAACGGTCTTAAAAACC 120 Query 121 ATAGGAG---AGGTCGTGTAAATTGTGCAAGTCTTAGATCGATTTCTTCATCAGAAGCCT 177 ||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct 121 ATAGGAGATCAGGTCGTGTAAACTGTGCAAGTCTCAGATCTATTTCTTCATCAGAAGCCT 180 Query 178 TTGATGAGACCGCAAAAACCCATTTGATGCAGCCTTATGATGAGACATGTTCCAATGATG 237 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTGATGAGACCGCAAAAACCAATTTGATGCAGCCTTATGATGAGACATGTTCCAATGATG 240 Query 238 ACCAAAAAGATTGT-GTAAAGGCAGGAGAGGGGACTAATCTATCTCTTTGGCCGGAATTT 296 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct 241 ACCAAAAAGATTGTGGT-AAGGCAGGAGAGGGGACTAATCTATCTCATTGGCCGGAATTT 299 Query 297 GAGAAAACTGTATCAGTTAATGAACAGGTAAAGTCCAATTCATCAGCAGATCAGTCTTTT 356 |||||||| |||||||||||| |||||||||| ||||||||||||||||| || |||||| Sbjct 300 GAGAAAACCGTATCAGTTAATCAACAGGTAAACTCCAATTCATCAGCAGAACAATCTTTT 359 Query 357 GTCAGAAATGCAGAGGAAAA-CTCTGTTAGGGATTTAGAAGAATTATTGAAAGAAGAGCG 415 || ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||| | Sbjct 360 GTGAGAAATGTAGA-GAAAAGATCTGTTAGGGATTTAGAAGAATTATTGAAAGAAGAGAG 418 Query 416 AGCTGCTCGAGCAGCGGTTTGCGTTGAGCTTGACAAAGAGAGAAACGCTGCAGCATCCGC 475 ||| ||||||||| ||||||| || ||||||||||||||||||| |||||||||||| || Sbjct 419 AGCGGCTCGAGCAACGGTTTGTGTCGAGCTTGACAAAGAGAGAAGCGCTGCAGCATCAGC 478 Query 476 AGCGGATGAAGCAATGGCGATGATACATAGGCTGCAAGATGAGAAGGCGGCTATTGAAAT 535 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 479 AGCGGATGAAGCGATGGCGATGATACATAGGCTGCAAGATGAGAAGGCGGCAATTGAAAT 538 Query 536 GGAAGCGAGGCAATTCCAGAGAATGGTTGAAGAGAAATCGACTTTTGATGCTGAAGAGAT 595 |||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 539 GGAAGCGAGGCAGTTCCAGAGACTGGTTGAAGAGAGATCGACTTTTGATGCTGAAGAGAT 598 Query 596 GGTCATACTCAAAGACATTTTGATACGGCGTGAGAGGGAAAAACATTTCTTGGAGAAAGA 655 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 599 GGTCATACTCAAAGACATTTTGATACGGCGTGAGAGAGAAAAACATTTCTTGGAGAAAGA 658 Query 656 AGTTGAAGCTTATAGACAACTACTCGAGGAAACAGAGGAATTGGAATGTTCTTTAACAAA 715 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 659 AGTTGAAGCTTATAGACAACTACTCGAAGAAACAGAGGAATTGGAATGTTCTTTAATAAA 718 Query 716 AGAGAAGAATGTTCCAGAACCGGAACACAAACAAAATC-AAGATTCTCAAGAGAGAAGAG 774 |||||||||||||||||||||||||||||||||||| | |||| | |||||||||||||| Sbjct 719 AGAGAAGAATGTTCCAGAACCGGAACACAAACAAAA-CAAAGACTGTCAAGAGAGAAGAG 777 Query 775 CTTTGCTCGTTCAAGAACTTGATGGAACGGTTCTTGATATGCCTTATAGAGAAGAAGAAA 834 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || Sbjct 778 CTTTGCTCGTTCAGGAACTTGATGGAACGGTTCTCGATATGCCTTATAGAGAAGAAGGAA 837 Query 835 ACAGAGATAAAAGCAGAGATCTGTATAAATCAGATTCAGAAGTCGCTTATTCACGCGTAC 894 |||||||||||| ||||||||||||||||||||||||||||||||| || ||||| || | Sbjct 838 ACAGAGATAAAAACAGAGATCTGTATAAATCAGATTCAGAAGTCGCGTACTCACGTGTGC 897 Query 895 GTGATGTTTATATGGTGAAGGATGAAACAGATAACATTAGTAAGAAGAAGAACCTAGAAG 954 |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| Sbjct 898 GTGATGTTTATATGGTGAAGGACGAAACAGAGAACATTAGTAAGAAGAAGAATCTAGAAG 957 Query 955 AATCCTCTGTTAGCAAACCTAAAGAATCGTTGGAGGAAAATAGTATCATTGTCTCGGGGA 1014 ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 958 AATCCTCTGTTGGCAAACCTAAAGAATCGTTGGATGAAAACAGTATCATTGTCTCGGGGA 1017 Query 1015 TTGCTCGAAAGCTTCCTCCATTATGTCGTCCACGCAAGAAGTCTCTGAGCTCTTCAGGTT 1074 ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||| Sbjct 1018 TTGCTCGAAAGCTACCTCCCTTATGTCGTCCACGCAAGAAGTCGCTGAGCTCTTCGGGTT 1077 Query 1075 CAAGGAGAAAATCAATGTCTGCGGTTGATTATGAGAGGTTAAAGATTGAGAATGAAGTGG 1134 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1078 CAAGGAGAAAATCGATGTCTGCGGTTGATTATGAGAGGTTAAAGATTGAAAATGAAGTGG 1137 Query 1135 AATTGTTAAGAGAAAGATTAAAGGCTGTTCAAGAGGAAAGAGAGGAGCTTACGAGACGAG 1194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 AATTGTTAAGAGAAAGATTAAAGGCTGTTCAAGAGGAAAGAGAGGAGCTTACGAGACGAG 1197 Query 1195 CATCTTTGCCTCCTTTACCATCAAAGGTTAGGGCTACGTCAGAGAGGCGAAGTTGGAGAA 1254 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 1198 CATCTTTGCCTCCTTTACCATCAAAGGTTAGGGCTACGTCAGAGAAGCGAAGTTGGACAA 1257 Query 1255 GATCTTCTTCCATGGACCTTCACTCTTC-------CTGAAGCCTTTTTAATTTTATGCAC 1307 |||||| ||||||||| ||||||||||| |||||||||||| ||||||||| || Sbjct 1258 GATCTTGTTCCATGGATCTTCACTCTTCTTGAAGGCTGAAGCCTTTTAAATTTTATGTAC 1317 Query 1308 GTAGATACATACATGTT-GT--GTAT-GTATA--GGATAC-AGTATC-----CG-GTT-A 1353 |||| ||||||||||| || |||| ||||| |||| | | |||| || ||| | Sbjct 1318 TTAGACACATACATGTTTGTATGTATAGTATACAGGATTCGATTATCAGTTACGTGTTTA 1377 Query 1354 C---TTTCGAGCCATCCCTGTAGAGAA-TGCTTGGATCGCAAGTCAACCCTTTGGGA-TG 1408 | ||| |||||||| || | ||||| | |||||||||||||||| |||||||||| || Sbjct 1378 CAGATTTTGAGCCATCTCTATGGAGAAAT-CTTGGATCGCAAGTCA-CCCTTTGGGAATG 1435 Query 1409 TATTTCTCT-T-GTTTTTCAAATGTTTGCTTGCTTTTTGTTCGTTTATATCGACAATAAT 1466 ||||| ||| | || ||| | | |||||||||||||||||| ||||||||||||| Sbjct 1436 TATTTTTCTATCGTCGATCATACATA--CTTGCTTTTTGTTCGTTTGTATCGACAATAAT 1493 Query 1467 TATTCGACTTAGTGAATCAAATAT-TAATTACTGCAATAAAATTTGAAGAAAACT-ATTT 1524 |||||||| |||||| |||||||| || |||||||||||||| ||||||| |||| |||| Sbjct 1494 TATTCGACATAGTGATTCAAATATATA-TTACTGCAATAAAAGTTGAAGATAACTTATTT 1552 Query 1525 ACATGTCTTCTTTTCAAATTAAATCTAATTAAGCTACATTGAAAAAGTCATGCAACAACA 1584 ||||||| |||| |||||| |||| | |||||||||||||||||||||||||| Sbjct 1553 ACATGTCCTCTTATCAAAT-----CTAAG-A---TACATTGAAAAAGTCATGCAACAACA 1603 Query 1585 TCCAAATAAAACGATTGAAAGATATTTTGTGAATATCTTGTTGATGAAAATAGATTAGTG 1644 |||| ||| |||||||| |||||||||| || | | | |||||||||||||||||| | Sbjct 1604 TCCATATATAACGATTGGAAGATATTTT-TG--TGT-T-GTTGATGAAAATAGATTA-TA 1657 Query 1645 TAATATCTTTGTTAATTTTAGTGTAATATCACAT-GTCTAACAATATTTTAACCTCt-tt 1702 || || | ||| |||||||||||||||||| | ||||||||||| |||||||||| || Sbjct 1658 TA-TAA-T--GTTCATTTTAGTGTAATATCACTTTGTCTAACAATAATTTAACCTCTCTT 1713 Query 1703 tttttaaaaaaaTGAAGCTTGTCAATTGACCGATATAAAATATAACCGTTAT---A--AT 1757 ||||| ||| ||||||| |||| |||| ||||||||||||||||||||| | || Sbjct 1714 TTTTTTTAAAC--GAAGCTTTTCAACTGACTGATATAAAATATAACCGTTATTGTAGTAT 1771 Query 1758 GG-A-TTG---AATT--TTA--TTTTG----AA-TGTATGTAAGTGGTGAAAATGTATGT 1803 | ||| ||| ||| ||||| || |||||||||| ||||| ||||||||| Sbjct 1772 ATCAGTTGTTCAATGGATTAAATTTTGTTCTAAATGTATGTAAGCGGTGATAATGTATGT 1831 Query 1804 AAAA-TATATTTTACAGATTGTTGAGA 1829 |||| | |||||||||||||||||||| Sbjct 1832 AAAAATGTATTTTACAGATTGTTGAGA 1858 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90511582635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5