BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470494 Length=1706 Score E Sequences producing significant alignments: (Bits) Value AT1G05030.1 | Symbols: | Major facilitator superfamily protein... 2543 0.0 > AT1G05030.1 | Symbols: | Major facilitator superfamily protein | chr1:1438152-1441417 REVERSE LENGTH=1779 Length=1779 Score = 2543 bits (1377), Expect = 0.0 Identities = 1624/1737 (93%), Gaps = 41/1737 (2%) Strand=Plus/Plus Query 1 AGTCTAGCTCTCCGATCATGTGGGTGACGAATACCGTAATTCTACATCAG-CCCAATTCT 59 |||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||| Sbjct 16 AGTCTAGCTCTCCGATCATGTGGGTGACGAATACCGTACTTCTATATC-GACCCAATTCT 74 Query 60 CTGACCCGATTAACCTTTTCTTACCCGACCCGACTCACCCACTCTCGTAAAGTCTCTCCC 119 ||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| || Sbjct 75 ATGAACCGATTAACCTTTTCTTACCCGACCCGACTCGCCCACTCTCGTAAAGCCTCTTCC 134 Query 120 TTTTCCCG---C--T---TCTT----GAGGAAGAATCGGGTTACGGCACTGTCGACGACG 167 |||||||| | | |||| ||||||||| ||||||||| || | | | ||||| Sbjct 135 TTTTCCCGTTTCTTTCGGTCTTCAAAGAGGAAGAAGCGGGTTACGACA-T-T-GTCGACG 191 Query 168 AAGAAACCAGATGAAGATCACGAGTTATCGCCAGATGAGAAGCTGGAGAAATTCTCCGCT 227 |||||||||||||| ||||||||| ||||||||| | || |||||||||||||||| Sbjct 192 AAGAAACCAGATGACGATCACGAGATATCGCCAG-T--TCCGCCGGAGAAATTCTCCGCT 248 Query 228 GATGTGGGATGGCTATCGGCTTTTCCTCATGTATCAGTTGCTTCTATGGCCAATTTTCTC 287 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249 GATTTGGGATGGTTATCGGCTTTTCCTCATGTATCAGTTGCTTCTATGGCCAATTTTCTC 308 Query 288 TTTGGTTATCACATTGGAGTGATGAATGGCCCCATTGTGTCTATTGCGCGTGAACTTGGG 347 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 309 TTTGGTTATCACATTGGAGTGATGAATGGCCCCATCGTGTCTATTGCGCGTGAACTTGGG 368 Query 348 TTTGAAGGCAATTCTATTCTTGAGGGTCTTGTTGTGAGCATATTTATTGCCGGTGCATTT 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 TTTGAAGGCAATTCTATTCTTGAGGGTCTTGTTGTGAGCATATTTATTGCCGGTGCATTT 428 Query 408 ATTGGAAGCATAGTCTCCGGTCCACTAGTTGACAAGTTTGGCTACCGACGCACCTTTCAG 467 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 429 ATTGGTAGCATAGTCGCCGGTCCACTAGTTGACAAGTTTGGCTACCGACGCACCTTTCAG 488 Query 468 ATTGTCACGATACCCCTAATTCTTGGTGCCCTTGTGAGTGCACAAGCTAACTCCTTGGAT 527 ||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 489 ATTTTCACGATACCCCTCATTCTTGGTGCCCTTGTGAGTGCACAAGCTCACTCCTTGGAT 548 Query 528 GAGATCTTATGTGGAAGATTTCTTGTTGGTCTTGGTATTGGCGTCAACACAGTTCTTGTT 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 549 GAGATCTTATGTGGAAGATTTCTTGTTGGTCTTGGTATTGGCGTCAACACAGTTCTTGTT 608 Query 588 CCTATTTATATATCCGAGGTTGCTCCGACGAAATACAGAGGTTCCCTTGGAACTTTATGT 647 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 CCAATATATATATCCGAGGTTGCTCCGACGAAATACAGAGGTTCCCTTGGAACTTTATGT 668 Query 648 CAAATTGGCACTTGTCTCGGGATAATCTTTTCTCTTCTCTTAGGGATTCCTGCAGAAGAT 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 669 CAAATTGGCACTTGTCTCGGGATAATCTTTTCTCTTCTCTTAGGGATTCCTGCAGAAGAT 728 Query 708 GACTCTCATTGGTGGAGGACAATGCTCTATGTAGCGAGTATGCCTGGTTTTCTTCTTGCA 767 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 729 GACCCTCATTGGTGGAGGACAATGCTCTATGTAGCGAGTATGCCTGGTTTTCTTCTTGCA 788 Query 768 CTTGGTATGCAATTTGCAGTAGAAAGTCCCCGTTGGCTCTGTAAGGTTGGACGACTGGAT 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 789 CTTGGTATGCAATTTGCAGTAGAAAGTCCCCGTTGGCTCTGTAAGGTTGGACGACTTGAT 848 Query 828 GATGCCAAAGTAGTGATCAGAAACATCTGGGGAGGATCTGAAGTCGAGAAAGCGGTAGAA 887 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 849 GATGCCAAAGTAGTGATAAGAAACATCTGGGGAGGATCTGAAGTCGAGAAAGCTGTAGAA 908 Query 888 GATTTTCAGTCGGTTATGAAGAATAGTGGCTCCAACTTAAATAGCAGATGGCTGGACCTT 947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 909 GATTTTCAGTCGGTTATGAAGAATAGTGGCTCCAACTTAAATAGCAGATGGCTGGAACTC 968 Query 948 CTTGATAAACCACATTCACGAGTTGCATTCATTGGGGGCACCCTTTTTGTCCTTCAGCAA 1007 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 969 CTTGATAAACCACATTCACGAGTTGCATTCATTGGGGGCTCCCTTTTTGTCCTACAGCAA 1028 Query 1008 TTCGCAGGCATAAATGGTGTTCTTTATTTCTCATCTTTAACATTCCAAAATGTTGGAATC 1067 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1029 TTCGCGGGCATAAATGGCGTTCTTTATTTCTCATCTTTAACATTCCAAAATGTTGGAATC 1088 Query 1068 ACGAGTGGTGCTCAAGCAAGTCTATATGTTGGAGTCACAAATTTTGCAGGTGCTCTGTGT 1127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1089 ACGAGTGGTGCTCAAGCAAGTCTATATGTTGGAGTCACAAATTTTGCAGGTGCTCTGTGT 1148 Query 1128 GCGTCTTATTTGATTGATAAGCAAGGAAGAAAAAAGCTTCTTATTGGTAGTTACTTGGGA 1187 |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| Sbjct 1149 GCGTCTTATTTGATTGATAAGCAAGGAAGAAAGAAGCTTCTTATCGGTAGCTACTTGGGA 1208 Query 1188 ATGGCAGTCTCTATGTTTCTCATTGTTTATTCTGTTGGTTTCCCGTTGGATGAAGATCTG 1247 |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| Sbjct 1209 ATGGCAGTCTCTATGTTTCTTATTGTTTATGCTGTTGGTTTCCCCTTGGATGAAGATCTG 1268 Query 1248 AGCCAGAGTTTGTCAATACTTGGAACACTCATGTATATATTCAGTTTTGCAATTGGAGCT 1307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1269 AGCCAGAGTTTGTCAATACTTGGAACACTCATGTATATATTCAGTTTTGCAATTGGAGCT 1328 Query 1308 GGTCCTGTAACTGGTCTCATCATCCCTGAGCTAAGTAGCAACAGAACGCGTGGGAAAATC 1367 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 1329 GGTCCTGTAACAGGTCTCATCATCCCTGAGCTAAGCAGCAACAGAACGCGTGGAAAAATC 1388 Query 1368 ATGGGTTTCAGCTTCTCTGTACATTGGGTCTGCAACTTCTTGGTTGGTTTGTTCTTCCTG 1427 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1389 ATGGGTTTCAGCTTCTCTGTACATTGGGTCTCCAACTTCTTGGTTGGTTTGTTCTTCCTG 1448 Query 1428 GATCTGGTGGAGAAATTTGGAGTTGGAACGGTGTATGCCGGCTTTGGCAGC-GTATCATT 1486 |||||||||||||||| || ||||||||||| |||||| |||||||| | |||||||| Sbjct 1449 GATCTGGTGGAGAAATACGGGGTTGGAACGGTCTATGCCAGCTTTGGCT-CAGTATCATT 1507 Query 1487 GTTGGCAGCGGCGTTCTCATACCGCTTCATAGTGGAAACAAAGGGTCGATCACTAGAAGA 1546 |||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||| Sbjct 1508 GTTGGCAGCGGCATTCTCACACCTCTTCACGGTGGAAACAAAGGGTCGATCACTAGAAGA 1567 Query 1547 GATTGAAATGTCTTTGAACTCCACAGAC--C-TGAGCTAAAAAG------GGTAAAAGTG 1597 ||| ||| ||||||||||||||| |||| | |||| |||||| |||| ||||| Sbjct 1568 GATCGAACTGTCTTTGAACTCCAGAGACGACCTGAGTTAAAAAAAAAAACGGTATAAGTG 1627 Query 1598 GAAGAAAGAGAGAGAGACCTCaaaaaaaTT-TCAATGTTTTTCATCAGTTGTTGTAAA-T 1655 |||||||||||| ||||||||||| || ||| |||||||||||||||||||||| | Sbjct 1628 AAAGAAAGAGAGAAAGACCTCAAAATTTTTATCA--GTTTTTCATCAGTTGTTGTAAAAT 1685 Query 1656 --AG-T--C-TGGAAATTAGCTTGTGAGAAATCTTGTGAatatatatatataCATAG 1706 | | | ||||||||||||||||||||||||||||| |||||| |||||| ||| Sbjct 1686 GTAAATAGCCTGGAAATTAGCTTGTGAGAAATCTTGTGAGTATATAGATATACTTAG 1742 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84336915600 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5