BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470511
Length=1902
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05180.1 | Symbols: AXR1 | NAD(P)-binding Rossmann-fold supe... 2880 0.0
AT3G25880.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 191 2e-47
> AT1G05180.1 | Symbols: AXR1 | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:1498114-1501824 REVERSE LENGTH=1915
Length=1915
Score = 2880 bits (1559), Expect = 0.0
Identities = 1755/1850 (95%), Gaps = 12/1850 (1%)
Strand=Plus/Plus
Query 1 TCAGTTCACCGGAGGCAAAAATCATCTCTCGCTCTCAGCTGCGAAGATGCAACCAATCAA 60
||||||||||||||||||||||| ||||||||| | |||||||||||||||| || | ||
Sbjct 5 TCAGTTCACCGGAGGCAAAAATCGTCTCTCGCT-TGAGCTGCGAAGATGCAAGCAGTAAA 63
Query 61 AAGATCCAGAAAACATGTTGAAGAAGAGCCAACAATGGCT-GAACCTAAAATCAAGTACG 119
||||||||| | |||||||||||||||||||||||||| | |||||||||| ||||||||
Sbjct 64 AAGATCCAGGAGACATGTTGAAGAAGAGCCAACAATGG-TAGAACCTAAAACCAAGTACG 122
Query 120 ATCGTCAACTCAGGATTTGGGGGGAGGTAGGTCAAGCGGCTTTGGAAGAAGCGAGTATCT 179
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 123 ATCGTCAGCTCAGGATTTGGGGGGAGGTAGGTCAAGCGGCCTTGGAAGAAGCGAGTATCT 182
Query 180 GTTTGCTCAATTGTGGCCCTACTGGCTCCGAGGCCTTGAAGAATCTCGTCCTTGGTGGTG 239
|||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 183 GTTTACTCAATTGTGGCCCTACTGGTTCCGAGGCTTTGAAGAATCTCGTACTTGGTGGTG 242
Query 240 TTGGCT-GCATCACCATCGTTGATGGATCCACGGTTCAAATTGGTGACCTTGGAAACAAT 298
|||| | |||||||| | ||||||||||| | ||||||| ||||||||||||| ||||||
Sbjct 243 TTGG-TAGCATCACCGTTGTTGATGGATCTAAGGTTCAATTTGGTGACCTTGGGAACAAT 301
Query 299 TTCATGGTCGATGCGAAGAGTGTTGGGCAGTCTAAAGCCAAATCTGTTTGTGCGTTTCTC 358
|||||||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct 302 TTCATGGTCGATGCGAAGAGTGTTGGCCAATCAAAAGCCAAATCTGTTTGTGCGTTTCTC 361
Query 359 CAAGAGCTTAATGATTCTGTTAACGCCAGGTTTATTGAGGAGAATCCAGATACTTTGATT 418
|||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||
Sbjct 362 CAAGAGCTTAATGATTCTGTTAACGCCAAGTTTATTGAGGAGAATCCAGACACGTTGATT 421
Query 419 ACTACTAACCCATCTTTCTTCTCTCAGTTTACTCTCGTTATAGCCACTCAGCTGGTGGAA 478
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 422 ACTACTAACCCATCTTTCTTCTCTCAGTTCACTCTCGTTATAGCCACTCAGCTGGTGGAA 481
Query 479 GATTCAATGGTGAAACTTGATAGAATCTGTCGAGAAGCAAACGTCAAGTTGGTTTTGGTT 538
||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 482 GATTCAATGTTGAAACTTGATAGAATCTGTCGAGATGCAAACGTTAAGTTGGTTTTGGTT 541
Query 539 CGCTCTTATGGCCTTGCTGGGTTTGTTCGCATCTCTGTAAAGGAGCACCCCATAATTGAC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 CGCTCTTATGGCCTTGCTGGGTTTGTTCGCATCTCTGTAAAGGAGCACCCCATAATTGAC 601
Query 599 TCAAAACCAGATCATTTTCTTGACGACCTTCGCTTGAATAATCCATGGCCTGAACTCAAG 658
|||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 602 TCAAAACCTGATCATTTTCTTGACGACCTCCGCCTGAATAATCCATGGCCTGAACTCAAG 661
Query 659 AGTTTTGTGGAGACCATTGATCTAAATGTATCAGAGCCGCCCGCTGCACATAAGCACATA 718
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 662 AGTTTTGTGGAGACCATTGATCTGAATGTATCAGAGCCGGCCGCTGCACATAAGCACATA 721
Query 719 CCTTACGTTGTCATTCTTGTGAAGATGGCTGAGGAGTGGGCTCTATCCCATAGTGGTAAT 778
|||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 722 CCTTACGTCGTCATTCTTGTAAAGATGGCTGAGGAGTGGGCTCAATCCCATAGTGGTAAT 781
Query 779 CTTCCCTCAACCAGGGAAGAGAAAAAAGAGTTTAAGGATTTGGTTAAGTCCAAGATGATA 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 782 CTTCCCTCAACCAGGGAAGAGAAAAAAGAGTTTAAGGATTTGGTTAAGTCCAAGATGGTA 841
Query 839 TCTACGGATGAAGATAACTACAAAGAAGCCATTGAAGCCGCTTTCAAAGTTTTTGCTCCT 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 TCTACGGATGAAGATAACTACAAAGAAGCCATTGAAGCCGCTTTCAAAGTTTTTGCTCCT 901
Query 899 AGGGGAATCAGCTCAGAGGTTCAAAAATTAATTAATGATAGTTGTGCTGAAGCGAATTCA 958
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 902 CGAGGAATCAGCTCAGAGGTTCAAAAATTAATTAATGATAGTTGTGCTGAAGTGAATTCA 961
Query 959 AACTCATCAGCTTTTTGGGTGATGGTAGCGGCTCTGAAGGAGTTTGTTTTAAACGAAGGT 1018
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 962 AACTCCTCAGCTTTTTGGGTGATGGTAGCGGCTCTGAAGGAGTTTGTTTTAAATGAAGGT 1021
Query 1019 GATGGAGAGGCACCCCTTGAAGGCTCTATACCAGATATGACGTCTTCAACAGAACACTAT 1078
| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1022 GGTGGAGAGGCACCCCTTGAAGGTTCTATACCAGATATGACCTCTTCAACAGAACACTAT 1081
Query 1079 ATCAATTTGCAGAAAATCTATTTAGTCAAAGCCGAGGCTGATTTTCTTGTCATGGAGGAA 1138
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 1082 ATCAATTTGCAGAAAATCTATTTAGCCAAAGCCGAGGCTGATTTTCTTGTCATTGAGGAA 1141
Query 1139 CGAGTTAAAAACATTTTAAAGAAAATCGGCCGAGATCCGAATAGCATCTCAAAACCAACA 1198
||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||
Sbjct 1142 CGAGTTAAAAACATTTTAAAGAAAATCGGTCGAGATCCGAGCAGCATCCCAAAACCAACA 1201
Query 1199 ATCAAGAGCTTCTGCAAGAATGCAAGGAAACTTAAATTGTGCAGATATCGTATGGTAGAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 ATCAAGAGCTTCTGCAAGAATGCAAGGAAACTTAAATTGTGCAGATATCGTATGGTAGAG 1261
Query 1259 GACGAGTTCAGCAATCCTTCTGTAACTGAAATTCAAAAGTATTTAGCGGATGAGGACTAC 1318
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1262 GACGAGTTCAGAAATCCTTCTGTAACTGAAATTCAAAAGTATTTAGCGGACGAGGATTAC 1321
Query 1319 AGTGGTGCAATGGGGTTTTATATTCTTCTTAGAGCTGCGGACAGATTTGCTGCCAACTAT 1378
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322 AGTGGTGCAATGGGATTTTATATTCTTCTTAGAGCTGCGGACAGATTTGCTGCCAACTAT 1381
Query 1379 AACAAGTTTCCTGGGCAGTTTGATGGAGGAATGGATGAGGACATTTCTCGATTAAAAACT 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 AACAAGTTTCCTGGGCAGTTTGATGGAGGAATGGATGAGGACATTTCTCGATTAAAAACT 1441
Query 1439 ACTGCCTTGAGTCTTCTTACGGACTTGGGCTGTAACGGCGCAGTACTCCCCGATGACCTT 1498
|||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct 1442 ACTGCCTTGAGTCTTCTTACCGACTTGGGCTGTAACGGCTCAGTACTCCCAGATGACCTT 1501
Query 1499 ATCAATGAGATGTGCCGCTTTGGTGCCTCAGAGATTCATGTGGTTTCTGCCTTTGTTGGA 1558
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1502 ATCCATGAGATGTGTCGCTTTGGTGCCTCAGAGATTCATGTGGTTTCTGCCTTTGTTGGA 1561
Query 1559 GGAATCGCATCTCAAGAAGTCATCAAGCTTGTCACGAAGCAGTTTGTTCCAATGTTGGGG 1618
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1562 GGAATCGCATCTCAAGAAGTCATCAAGCTTGTCACAAAGCAGTTTGTTCCGATGTTGGGG 1621
Query 1619 ACTTACATCTTCAATGGCATTGATCACAAGTCTCAGTTATTGAAATTGTAGAAGATCTTT 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1622 ACTTACATCTTCAATGGCATTGATCACAAGTCTCAGTTATTGAAATTGTAGAAGATCTTT 1681
Query 1679 CCTTA-CACATTGGCTTGAAACAGAGAGAAATAGCTTTATCATATCTATTTATTCTTCTC 1737
||||| ||||||||||||||||||||||||| |||| |||||||| ||| ||||||||
Sbjct 1682 CCTTAACACATTGGCTTGAAACAGAGAGAAAGAGCTCTATCATAT--ATT-ATTCTTCT- 1737
Query 1738 TGAGTTGAAAGAGATTCTTTTTGCGGCTACTGGGAAACAAACTGTTCAATGACAATTCAG 1797
|| || ||||| | ||||||||| |||||| |||||||| | |||||||||| |||||
Sbjct 1738 -GA-TTAAAAGATAATCTTTTTGCTACTACTGAGAAACAAAATTTTCAATGACAGTTCAG 1795
Query 1798 CCGAGACAATTCGACTCCGAATTTTCCAACATATTGCTTTGCTTTGTCCT 1847
| ||||| || |||||| |||| ||| || || |||||||||||||||||
Sbjct 1796 CTGAGACCATCCGACTCAGAATCTTCGAAAATCTTGCTTTGCTTTGTCCT 1845
> AT3G25880.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:9469713-9470033 REVERSE LENGTH=210
Length=210
Score = 191 bits (103), Expect = 2e-47
Identities = 177/210 (84%), Gaps = 15/210 (7%)
Strand=Plus/Plus
Query 101 GAACCTAAAATCAAGTACGATCGTCAACTCAGGATTTGGGGGGAGGTAGGTCAAGCGG-C 159
||||||||| |||||||||||||||||||| | | | | || ||||| || |
Sbjct 7 GAACCTAAAGCCAAGTACGATCGTCAACTCATG-TAT------A-CTA-TTCAAG-GGAC 56
Query 160 TTTGGAAGAAGCGAGTATCTGTTTGCTCAATTGTGGCCCTACTGGCTCCGAGGCCTTGAA 219
|||||||||||||||||||||||| ||||||||||| |||| ||| ||| | ||||||||
Sbjct 57 TTTGGAAGAAGCGAGTATCTGTTTACTCAATTGTGGTCCTATTGGTTCCAATGCCTTGAA 116
Query 220 GAATCTCGTCCTTGGTGGTGTTGGCT-GCATCACCATCGTTGATGGATCCACGGTTCAAA 278
|||||||||||||||||||||||| | | |||||||||||||| ||||||| ||||| ||
Sbjct 117 GAATCTCGTCCTTGGTGGTGTTGG-TAGTATCACCATCGTTGAAGGATCCAAGGTTCTAA 175
Query 279 TTGGTGACCTT-GGAAACAATTTCAT-GGT 306
|||| ||| || |||||||||||||| |||
Sbjct 176 TTGGAGACATTTGGAAACAATTTCATAGGT 205
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94176222420
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5