BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470513
Length=3278
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05200.1 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate rece... 4990 0.0
AT2G32390.3 | Symbols: GLR3.5 | glutamate receptor 3.5 | chr2:... 1352 0.0
> AT1G05200.1 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor
3.4 | chr1:1505317-1509152 FORWARD LENGTH=3257
Length=3257
Score = 4990 bits (2702), Expect = 0.0
Identities = 2978/3112 (96%), Gaps = 16/3112 (1%)
Strand=Plus/Plus
Query 178 GGTGTTACTCCAAATATACCAAATGGTTTTATAAGACCAGGACAAAGAGaaaaaaaCCAG 237
|||||||||||||||| | ||||||||| ||| |||||||||| || || |||||| ||
Sbjct 146 GGTGTTACTCCAAATAAATCAAATGGTTATATGAGACCAGGAC-AA-AG--AAAAACTAG 201
Query 238 TGCTTTTGCTGGAAATTGTGATAAAGATGAGATTTTTGGTGACGATAAGAGGAGTTTCTA 297
||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |
Sbjct 202 TGCTTTTGCTGGAAATTGTGATAAAGATGGGATTTTTGGTGATGATAAGAGAAGTTTCCA 261
Query 298 TGGCGAAAGCAATCAGAGTTGTGTTGTTATGTCTCTCTGTCTTGTGGGTCGTTCCAAAGG 357
|||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct 262 TGGCGAAAGCAATCAGAGTTGTGTTGTTATGTGTTTCTGTCTTGTGGGTTGTTCCAAAGG 321
Query 358 AATGTGCTTGCAGAAGTAATTTCTCAAGAAACTCG------TCTTCAACTTCTTCTTTGC 411
|||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct 322 AATGTGCTTGTAGAAGTAATTTCTCTAGAAACTCGTCTTCTTCTTCTTCTTCTTCTTTGC 381
Query 412 CGCCATTATCACAGAAGCCAAGCTCTGTGAATGTTGGAGCTCTGTTTACTTATGATTCTT 471
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 382 GGCCATTAAGACAGAGGCCAAGCTCTGTGAATGTTGGAGCTCTGTTTACTTATGATTCTT 441
Query 472 TTATCGGAAGAGCGGCTAAACCCGCGTTTATAGCGGCAATGGATGATGTTAATGCTGACC 531
|||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||
Sbjct 442 TTATCGGAAGAGCGGCTAAACCCGCGGTTAAAGCAGCTATGGATGATGTTAATGCTGACC 501
Query 532 TAACTGTACTTAAGGGCATCAAGCTTAATATTGTTTTTCAAGACTCAAATTGCAGTGGAT 591
|| ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 502 AAAGTGTTCTTAAGGGCATCAAGCTTAATATCATCTTTCAAGACTCAAATTGCAGTGGAT 561
Query 592 TTATAGGCACCATGGGAGCTTTGCAGCTGATGGAAAACAAAGTGGTTGCAGCCATTGGTC 651
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 562 TTATCGGCACCATGGGAGCTTTGCAGCTGATGGAAAACAAAGTGGTTGCAGCCATTGGTC 621
Query 652 CACAATCTTCAGGGATTGCTCACATGATCTCCTATGTATCTAATGAGCTTCATGTACCTC 711
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 622 CACAATCTTCAGGGATTGCTCACATGATCTCCTATGTAGCTAATGAGCTTCATGTACCTC 681
Query 712 TCTTGTCATTTGGAGCAACGGATCCGACTCTCTCCTCTCTGCAATATCCTTATTTCCTCC 771
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 682 TCTTGTCATTTGGAGCAACGGATCCGACTCTCTCCTCTCTGCAATTTCCTTATTTCCTCC 741
Query 772 GCACCACGCAGAATGATTACTTCCAAATGCATGCAATCGCAGATTTTCTATCATATTCCG 831
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 742 GCACCACGCAGAATGATTACTTCCAAATGCATGCGATCGCAGATTTTCTATCATATTCCG 801
Query 832 GATGGAGACAAGTCATTGCGATATTCATTGATGATGAATGTGGTAGGAACGGGATATCTG 891
|||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct 802 GATGGAGACAAGTCATTGCGATATTCGTTGATGATGAGTGTGGCAGGAACGGGATATCTG 861
Query 892 TTCTAGGCGATGTATTAGCCAAGAAACGCTCCAGGATCTCTTACAAGGCTGCAATTACTC 951
| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 862 TCCTTGGCGATGTATTAGCCAAGAAACGCTCGAGGATCTCTTACAAGGCTGCAATTACTC 921
Query 952 CTGGTGCAGATTCTAGCTCCATCAAG-GACTTGTTGGTTTCTGTTAATCTGATGGAATCT 1010
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 922 CTGGTGCAGATTCTAGCTCCATC-AGAGACTTGTTGGTTTCTGTTAATCTGATGGAATCT 980
Query 1011 CGGGTTTTTGTTGTTCATGTGAATCCTGACTCTGGTTTAAACGTTTTCTCTGTGGCTAAA 1070
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 981 CGGGTTTTTGTTGTCCATGTGAATCCTGACTCTGGTTTAAACGTTTTTTCTGTGGCTAAA 1040
Query 1071 TCTCTTGGAATGATGGGAAGTGGTTATGTTTGGATCGCAACAGACTGGCTTCCTACAGCT 1130
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 TCTCTTGGAATGATGGCAAGTGGTTATGTTTGGATCGCAACAGACTGGCTTCCTACAGCT 1100
Query 1131 ATGGATTCCATGGAGCACGTGGATTCCGACACGATGGATCTCTTGCAAGGAGTGGTTGCT 1190
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1101 ATGGATTCCATGGAGCACGTGGATTCAGACACGATGGATCTCTTGCAAGGAGTGGTTGCT 1160
Query 1191 TTTCGCCATTACACAATTGAGAGTAGTGTGAAGAGACAGTTTATGGCGAGATGGAGGAGT 1250
|||||||| |||||||| ||||||||||| || |||||||||||||||||||||| || |
Sbjct 1161 TTTCGCCACTACACAATCGAGAGTAGTGTCAAAAGACAGTTTATGGCGAGATGGAAGAAT 1220
Query 1251 CTTAGACCCAATGATGGCTTCAACTCTTACGCGATGTACGCTTATGATTCTGTCTGGTTA 1310
|||||||| ||||||||||| |||||||| |||||||| |||||||||||||| ||||||
Sbjct 1221 CTTAGACCAAATGATGGCTTTAACTCTTATGCGATGTATGCTTATGATTCTGTTTGGTTA 1280
Query 1311 GTTGCTCGTGCCCTCGATGTTTTCTTCAGAGAAAACAATAAAATAACTTTCTCCAACGAT 1370
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1281 GTTGCTCGTGCCCTCGATGTTTTCTTCAGAGAAAACAATAACATAACTTTCTCCAACGAT 1340
Query 1371 CCAAATCTACACAAAACCAATGGTAGCACAATTCAGCTATCAGCACTAAGTGTTTTCAAT 1430
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1341 CCAAATCTGCACAAAACAAATGGTAGCACTATTCAGCTATCAGCACTAAGTGTTTTCAAT 1400
Query 1431 GAAGGGGAGAAGTTTATGAAGATCATTCTTGGGATGAATCATACTGGTGTGACGGGCCCA 1490
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1401 GAAGGAGAGAAGTTTATGAAGATCATTCTTGGGATGAATCATACTGGTGTGACGGGTCCA 1460
Query 1491 ATCCAGTTTGATTCAGATAGAAACCGGGTTAACCCGGCTTATGAAGTTCTAAACTTAGAA 1550
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1461 ATCCAGTTTGATTCAGATAGAAACCGGGTTAATCCGGCTTATGAAGTTCTAAACTTAGAA 1520
Query 1551 GGTACAGGTCCACGCACAGTCGGGTACTGGTCAAATCATTCGGGTCTCTCTGTGGTCCAT 1610
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1521 GGTACAGCTCCACGCACAGTCGGGTACTGGTCAAATCATTCGGGTCTCTCTGTGGTCCAT 1580
Query 1611 CCAGAGACCTTGTACTCTAAGCCTCCAAACACATCTACAGCAAACCAGCGTCTTCATGGA 1670
||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||
Sbjct 1581 CCAGAGACCTTGTACTCTAGGCCTCCAAACACATCTACAGCAAACCAGCGTCTTAAAGGA 1640
Query 1671 ATCATATGGCCAGGCGAAGTAACTAAGCCTCCTCGTGGTTGGGTGTTTCCTAATAATGGA 1730
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1641 ATCATATATCCAGGAGAAGTAACTAAGCCTCCTCGTGGTTGGGTGTTTCCTAATAATGGA 1700
Query 1731 AAACCGCTCAGAATCGGGGTGCCTAACCGTGTGAGCTATACAGAATACGTTTCTAAGGAT 1790
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1701 AAACCGCTCAGAATCGGGGTGCCTAACCGTGTGAGCTATACAGATTACGTTTCTAAGGAT 1760
Query 1791 AAGAACCCGCCTGGCGTTAGAGGCTACTGCATTGATGTCTTTGAAGCCGCAATTGAATTG 1850
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1761 AAAAACCCGCCTGGCGTTAGAGGCTACTGCATTGATGTCTTTGAAGCCGCTATTGAATTG 1820
Query 1851 CTTCCATATCCTGTTCCACGTACTTATATACTATATGGAGACGGGAAGAGAAATCCTTCT 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821 CTTCCATATCCTGTTCCACGTACTTATATACTATATGGAGACGGGAAGAGAAATCCTTCT 1880
Query 1911 TACGATAATCTCGTCAATGAAGTGGTTGCAGATAATTTTGATGTAGCTGTAGGAGATATC 1970
|| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1881 TATGATAACCTCGTCAATGAAGTTGTTGCGGATAATTTTGATGTAGCTGTAGGAGATATC 1940
Query 1971 ACAATCGTTACAAACAGAACAAGATATGTAGATTTCACACAACCGTTTATAGAATCAGGG 2030
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1941 ACAATCGTCACAAACAGAACAAGATATGTAGATTTCACACAACCGTTTATAGAATCAGGG 2000
Query 2031 CTTGTGGTAGTGGCTCCGGTTAAGGAGGCCAAGTCTAGTCCTTGGTCATTCCTGAAACCA 2090
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2001 CTTGTGGTGGTGGCTCCGGTTAAGGAGGCCAAGTCTAGTCCTTGGTCATTCCTGAAACCA 2060
Query 2091 TTCACTATAGAGATGTGGGCTGTCACTGGAGCCTTCTTTCTCTTTGTGGGAGCCATGGTC 2150
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2061 TTCACTATAGAGATGTGGGCTGTCACTGGAGGCTTCTTTCTCTTTGTGGGAGCCATGGTC 2120
Query 2151 TGGATTCTCGAACACCGCTTCAACCAAGAATTCCGTGGCCCTCCTAGGCGTCAACTCATT 2210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2121 TGGATTCTCGAACACCGCTTCAACCAAGAATTCCGTGGCCCTCCTAGGCGTCAACTCATT 2180
Query 2211 ACCATCTTCTGGTTTAGCTTCTCAACGATGTTCTTCTCTCATAGGGAGAACACGGTGAGT 2270
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2181 ACCATCTTCTGGTTTAGCTTCTCAACAATGTTCTTCTCTCATAGGGAGAACACGGTGAGT 2240
Query 2271 TCACTGGGGAGGCTGGTGCTGATCATTTGGTTATTCGTGGTTCTGATCATCAACTCGAGC 2330
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2241 TCACTGGGGAGGTTTGTGCTGATCATTTGGTTATTCGTGGTTCTGATCATCAACTCGAGC 2300
Query 2331 TACACGGCCAGTCTCACTTCAATCCTAACCGTTCGACAGCTGACATCTCGGATTGAAGGA 2390
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 2301 TACACGGCCAGTCTCACTTCGATCCTAACCATTCGACAGCTGACATCTCGGATTGAAGGA 2360
Query 2391 ATAGATAGCTTGGTAACGAGCAATGAACCAATTGGAGTTCAAGACGGTACCTTTGCTCGG 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 ATAGATAGCTTGGTAACGAGCAATGAACCAATTGGAGTTCAAGACGGTACCTTTGCTCGG 2420
Query 2451 AACTATCTAATCAACGAGCTTAACATACTTCCTTCGAGGATTGTTCCACTGAAAGACGAA 2510
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 2421 AACTATCTAATCAACGAGCTTAACATACTACCTTCAAGGATTGTTCCTCTGAAAGACGAA 2480
Query 2511 GAACAGTACCTTTCTGCTCTACATCGTGGTCCCAAAGCTGGCGGCGTGGCAGCCATTGTA 2570
|||||||||||||||||||| || || |||||||| |||||||| |||||||||||||||
Sbjct 2481 GAACAGTACCTTTCTGCTCTGCAACGCGGTCCCAACGCTGGCGGTGTGGCAGCCATTGTA 2540
Query 2571 GACGAGCTTCCTTACATCGAAGTTCTTTTGACAAATAGCAACTGCAAGTTCCGTACAGTA 2630
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2541 GATGAGCTTCCTTACATCGAAGTTCTTTTGACAAATAGCAACTGCAAATTCCGTACAGTA 2600
Query 2631 GGACAAGAATTCACACGCACAGGCTGGGGTTTCGCATTCCAGAGAGACTCCCCTTTAGCT 2690
|| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2601 GGGCAAGAGTTCACACGCACAGGCTGGGGTTTCGCATTCCAGAGAGATTCCCCTTTAGCT 2660
Query 2691 GTAGACATGTCAACGGCTATCTTGCAACTCTCTGAAGAAGGCGAGCTCGAGAAAATCCAC 2750
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2661 GTAGACATGTCAACGGCTATCTTGCAACTATCTGAAGAAGGCGAGCTCGAGAAAATCCAT 2720
Query 2751 AGGAAATGGCTTAACTACAAGCATGAATGCTCGATGCAGATCTCACACAGTGAGGACTCT 2810
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2721 AGGAAATGGCTTAACTACAAGCATGAATGCTCGATGCAGATCTCAAACAGTGAGGACTCT 2780
Query 2811 CAGCTTTCACTTAAGAGTTTCTGGGGACTCTTCCTTATCTGTGGCATCACTTGCTTCATG 2870
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2781 CAGCTTTCACTAAAGAGTTTCTGGGGACTCTTCCTTATCTGTGGCATCACTTGCTTCATG 2840
Query 2871 GCACTCACTGTCTTCTTCTGGAGGGTTTTCTGGCAATACCAGAGGTTGCTACCAGAAAGT 2930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2841 GCACTCACTGTCTTCTTCTGGAGGGTTTTCTGGCAATACCAGAGGTTGCTACCAGAAAGT 2900
Query 2931 GCAGATGAGGAAAGGGCAGGCGAGGTGTCTGAGCCATCTCGATCAGGGAGGGGTTTACGA 2990
|| || ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||
Sbjct 2901 GCGGACGAGGAAAGGGCAGGCGAAGTGTCTGAGCCATCTCGATCAGGGAGAGGTTCACGA 2960
Query 2991 GCACCGAGTTTCAAGGAACTGATAAAAGTTGTGGATAAGAGGGAAGCAGAGATCAAGGAG 3050
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GCACCGAGTTTCAAGGAATTGATAAAAGTTGTGGATAAGAGGGAAGCAGAGATCAAGGAG 3020
Query 3051 ATACTGAAGCAGAAGAGTAGCAAGAAACTCAAAACTATCCAAAGTGCAGCTGGGACTTCA 3110
||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 3021 ATACTTAAGCAGAAGAGTAGCAAGAAACTCAAAAGTACCCAAAGTGCAGCTGGGACTTCA 3080
Query 3111 CAATCACAACATGGCGAAATTACTTAAACAGATAAGAGTTTAAATGACTATTAACATAG- 3169
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3081 CAATCACAACATGGCGAAATTACTTAATCAGATAAGAGTTTAAATGACTATTAACATACT 3140
Query 3170 -AGGGGG-AA-TAAACTTGTCAGTAGATTTTGTAATAGGAAAGTTCAAGGAACCACAGAC 3226
|| ||| || |||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 3141 TAGAGGGTAAATAAACTTGTCAGAAGATTTTGTAATAGGAAAGTTCAAGGAACCACAAAG 3200
Query 3227 CAAAGCTAAATTGTAAATCTTTTTTCTGAGACGTAATGAAAAAATCATCTTC 3278
|||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 3201 CAAAGCTAAATTGTAAATCTTTTTTCTGAGTCGTAATGAAAAAAGCATCTTC 3252
> AT2G32390.3 | Symbols: GLR3.5 | glutamate receptor 3.5 | chr2:13748441-13751933
REVERSE LENGTH=2749
Length=2749
Score = 1352 bits (732), Expect = 0.0
Identities = 1360/1656 (82%), Gaps = 72/1656 (4%)
Strand=Plus/Plus
Query 428 GCCAAGCTCTGTGAATGTTGGAGCTCTGTTTACTTATGATTCTTTTATCGGAAGAGCGGC 487
|||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 142 GCCAAGCTCTGTAAACGTTGGAGCTCTGTTTACTTATGATTCTTTCATTGGAAGAGCGGC 201
Query 488 TAAACCCGCGTTTATAGCGGCAATGGATGATGTTAATGCTGACCTA-ACTGTACTTAAGG 546
|||| |||||| | ||||| || || || |||||||||||| | | | | || | ||
Sbjct 202 CAAACTTGCGTTTGTGGCGGCCATTGAAGACATTAATGCTGACC-AGAGTATCCTCAGGG 260
Query 547 GCATCAAGCTTAATATTGTTTTTCAAGACTCAAATTGCAGTGGATTTATAGGCACCATGG 606
||| ||||||||||||||| || || ||| | ||||||||||||||| | ||||||||||
Sbjct 261 GCACCAAGCTTAATATTGTCTTCCAGGACACTAATTGCAGTGGATTTGTTGGCACCATGG 320
Query 607 GAGCTTTGCAGCTGATGGAAAACAAAGTGGTTGCAGCCATTGGTCCACAATCTTCAGGGA 666
||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct 321 GAGCTTTGCAGCTAATGGAGAACAAGGTGGTTGCAGCCATTGGTCCACAATCTTCAGGAA 380
Query 667 TTGCTCACATGATCTCCTATGTATCTAATGAGCTTCATGTACCTCTCTTGTCATTTGGAG 726
||| |||||| |||||| ||||| |||||||||||||||||||| |||||||||||| ||
Sbjct 381 TTGGTCACATAATCTCCCATGTAGCTAATGAGCTTCATGTACCTTTCTTGTCATTTGCAG 440
Query 727 CAACGGATCCGACTCTCTCCTCTCTGCAATATCCTTATTTCCTCCGCACCACGCAGAATG 786
||||||| |||||||| || || || ||||| ||||||||||| || ||||| |||||||
Sbjct 441 CAACGGACCCGACTCTTTCTTCGCTTCAATACCCTTATTTCCTTCGTACCACACAGAATG 500
Query 787 ATTACTTCCAAATGCATGCAATCGCAGATTTTCTATCATATTC-CGGATGGAGACAAGTC 845
|||||||||| ||| |||||||| | |||||| |||| |||| || ||||||| ||||
Sbjct 501 ATTACTTCCAGATGAATGCAATCACGGATTTTGTATCCTATTTTCG-ATGGAGAGAAGTT 559
Query 846 ATTGCGATATTCATTGATGATGAATGTGGTAGGAACGGGATATCTGT-TCTAGGCGATG- 903
||||||| || | |||||||| | ||||||||| || |||||||| | |||| ||||
Sbjct 560 GTTGCGATCTTTGTGGATGATGAGTATGGTAGGAATGGAATATCTGTAT-TAGGTGATGC 618
Query 904 TATTAGCCAAGAAACGCT-CCAGGATCTCTTACAAGGCTGCAATTACTCCTGGTGCAGAT 962
| |||||||||||||| | ||| ||||||||||||||||||| || | ||||||||||||
Sbjct 619 T-TTAGCCAAGAAACG-TGCCAAGATCTCTTACAAGGCTGCATTTCCACCTGGTGCAGAT 676
Query 963 TCTAGCTCCATCAAG-GACTTGTTGGTTTCTGTTAATCTGATGGAATCTCGGGTTTTTGT 1021
|||||| |||| | || || |||| |||||||||||||||||||||||| | |||||
Sbjct 677 AATAGCTCAATCA-GTGATTTATTGGCTTCTGTTAATCTGATGGAATCTCGCATCTTTGT 735
Query 1022 TGTTCATGTGAATCCTGACTCTGGTTTAAACGTTTTCTCTGTGGCTAAATCTCTTGGAAT 1081
|||||||||||||||||| || ||||||||| | |||||||| || ||||||||||||||
Sbjct 736 TGTTCATGTGAATCCTGATTCGGGTTTAAACATATTCTCTGTCGCCAAATCTCTTGGAAT 795
Query 1082 GATGGGAAGTGGTTATGTTTGGATCGCAACAGACTGGCTTCCTACAGCTATGGATTCCAT 1141
|||||||||||| ||||| |||||| | || || ||||||| ||||||| ||||||||||
Sbjct 796 GATGGGAAGTGGCTATGTCTGGATCACTACTGATTGGCTTCTTACAGCTTTGGATTCCAT 855
Query 1142 GGAGCACGT-GGATTCC-GACACGATGGATCTCTTGCAAGGAGTGGTTGCTTTTCGCCAT 1199
||| | ||| |||| || || | ||||||||||||||||||||||||| ||||| |||
Sbjct 856 GGAAC-CGTTGGATCCCAGAG-CTTTGGATCTCTTGCAAGGAGTGGTTGCATTTCGTCAT 913
Query 1200 TACACAATTGAGAGT-AGTGTGAAGAGACAGTTTATGGCGA-GATGGAGGAGTCTTAGAC 1257
|||||| ||||||| | ||||||||||||| | || |||||| | ||||||
Sbjct 914 TACACACCTGAGAGTGACAAC-AAGAGACAGTTTAAAG-GAAGATGGAAAAACCTTAGAT 971
Query 1258 -C---------C-AA----TGATG--G-CTTCAACTCTTACGCGATGTACGCTTATGATT 1299
| | || ||||| | |||||| ||||||||| |||| ||||| ||||
Sbjct 972 TCAAGGAGAGTCTAAAAAGTGATGATGGCTTCAATTCTTACGCGCTGTATGCTTACGATT 1031
Query 1300 CTGTCTGGTTAGTTGCTCGTGCCCTCGATGTTTTCTTCAGAGAAAACAATAAAATAACTT 1359
|||| ||||| || ||||| || ||||||||||||||||| || ||||| | | ||||
Sbjct 1032 CTGTTTGGTTGGTAGCTCGCGCTCTCGATGTTTTCTTCAGCCAAGGCAATACAGTGACTT 1091
Query 1360 TCTCCAACGATCCAAATCTACACAAA-ACCAATGGTAGCA-CAATTCAGCTATCAGCACT 1417
|||| || ||||||| ||| | || ||||| | |||| || || |||||||| |||
Sbjct 1092 TCTCTAATGATCCAAGTCTG-AGGAATACCAACGATAGCGGCA-TTAAGCTATCAAAACT 1149
Query 1418 A-AGTGTTTTCAATGAAGGGGAGAAGTT-TATGAAGATCATTCTTGGGATGAATCATACT 1475
| |||||||||||||||||| ||| | || || ||||||||| ||||||| ||||
Sbjct 1150 TCACA-TTTTCAATGAAGGGGAGAGGTTCT-TGCAGGTCATTCTTGAGATGAATTATACA 1207
Query 1476 GGTGTGACGGGCCCAATCCAGTTTGATTCAGATAGAAACCGGGTTAACCCGGCTTATGA- 1534
||| |||| || | |||| ||||| ||||||| | ||||||| |||| || || || ||
Sbjct 1208 GGTCTGACTGGACAAATCGAGTTTAATTCAGAGAAAAACCGGATTAATCCAGCCTACGAC 1267
Query 1535 AGTTCTAAACTTAGAAGGTACAGGTCCAC-GCACAGTCGGGTACTGGTCAAATCATTCGG 1593
| |||| ||| || || |||||||||||| | | ||| || |||||||| |||||| | |
Sbjct 1268 A-TTCTGAACATAAAAAGTACAGGTCCACTG-AGAGTTGGATACTGGTCGAATCATACAG 1325
Query 1594 GTCTCTCTGT-G-GTCCATCCAGAGACCTTGTACTCTAAGCCTCCAAACACATCTACAGC 1651
|| |||| || | | || ||||||||| || |||||||||||| ||||||||||| ||
Sbjct 1326 GTTTCTCAGTCGCG-CC-TCCAGAGACATTATACTCTAAGCCTTCAAACACATCTGCAA- 1382
Query 1652 AA-ACCAGCGTCTTCATG-GAATCATATGGCCAGGCGAAGTAACTAA-GCCTCCTCGTGG 1708
|| |||| |||||| ||| || ||||||||||||| ||||||| ||| ||| ||||| ||
Sbjct 1383 AAGACCAACGTCTTAATGAGA-TCATATGGCCAGGGGAAGTAA-TAAAGCCACCTCGGGG 1440
Query 1709 TTGGGTGTTTCC-T-AATAATGGAAAACCGCTCAGAATCGGGGTGCCTAACCGTGTGAGC 1766
|||||| ||||| | || |||||||| ||||| | ||||||||||||||||||||| |||
Sbjct 1441 TTGGGT-TTTCCCTGAA-AATGGAAAGCCGCTGAAAATCGGGGTGCCTAACCGTGTAAGC 1498
Query 1767 TATACAGAA-TACGTTTCTAAGGATAAGAACCCGCCTGGCGTTAGAGGCTACTGCATTGA 1825
|| | | || || | ||||||||| |||||||||| ||| |||| ||||| ||||| ||
Sbjct 1499 TACAAA-AACTATGCTTCTAAGGACAAGAACCCGCTTGGTGTTAAAGGCTTTTGCATCGA 1557
Query 1826 TGTCTTTGAAGCCGCAATTGAATTGCTTCCATATCCTGTTCCACGTACTTATATACTATA 1885
|||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 1558 CATCTTTGAAGCTGCGATTCAATTGCTTCCATATCCCGTTCCACGTACTTATATACTATA 1617
Query 1886 TGGAGACGGGAAGAGAAATCCTTCTTACGATAATCTCGTCAA-TGAAGTGGTTGCAGATA 1944
||| |||||||||| ||||||||| || || |||||| | || |||||| | |||| |||
Sbjct 1618 TGGGGACGGGAAGAAAAATCCTTCATATGACAATCTCAT-AAGTGAAGTTGCTGCAAATA 1676
Query 1945 ATTTT-GATGTAGCTGTAGGAGATATCACAATCGTTACAAACAGAAC-AAGATATGTAGA 2002
|||| ||||||||||| || ||| | || ||| ||||||||||||| ||| | ||||||
Sbjct 1677 -TTTTCGATGTAGCTGTTGGGGATGTTACCATCATTACAAACAGAACCAAGTT-TGTAGA 1734
Query 2003 TTTCACACAACCGTTTATAGAATCAGGGCTTGTGGT 2038
|||||| || || |||||||||||||||||||||||
Sbjct 1735 TTTCACGCAGCCATTTATAGAATCAGGGCTTGTGGT 1770
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 163092731693
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5