BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470523 Length=1125 Score E Sequences producing significant alignments: (Bits) Value AT1G05260.1 | Symbols: RCI3, RCI3A | Peroxidase superfamily pro... 1657 0.0 > AT1G05260.1 | Symbols: RCI3, RCI3A | Peroxidase superfamily protein | chr1:1529767-1531439 FORWARD LENGTH=1209 Length=1209 Score = 1657 bits (897), Expect = 0.0 Identities = 996/1043 (95%), Gaps = 9/1043 (1%) Strand=Plus/Plus Query 27 AAATTTAAAGATGAATTACCTGAGAGCTATATCTCTTTCACTCTCTTTCTTTCTTGTGGG 86 ||||||||||||||||| | ||| ||||||| |||||||| ||||||||||||||||||| Sbjct 51 AAATTTAAAGATGAATTGCTTGATAGCTATAGCTCTTTCAGTCTCTTTCTTTCTTGTGGG 110 Query 87 AATGGTTGGACCGATCCAAGCTCAATTGCAGATGAATTTCTATGCCAATTCTTGTCCTAA 146 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 111 AATTGTTGGACCGATCCAAGCTCAATTGCAGATGAATTTCTATGCCAATTCTTGTCCTAA 170 Query 147 TGCCGAAAAGATTGTTCAAGATTTTGTTTCAAACCACATTTCTAATGCTCCTTCTCTTGC 206 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 171 TGCTGAAAAGATTGTTCAAGATTTTGTTTCAAACCACGTTTCTAATGCTCCTTCTCTTGC 230 Query 207 TGCTGCTCTCATTAGAATGCATTTCCATGACTGTTTTGTCCGAGGTTGTGATGGATCAGT 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 231 TGCTGCTCTCATTAGAATGCATTTCCATGACTGTTTTGTCCGAGGTTGTGATGGATCAGT 290 Query 267 GCTTATAAACTCAACGTCTGGAAACGCAGAGAGAGACGCAACTCCTAACCTAACGGTTCG 326 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 291 GCTTATAAACTCAACGTCAGGAAACGCAGAGAGAGACGCGACTCCTAACCTAACGGTTCG 350 Query 327 AGGGTTTGGCTTCATCGACGCAATCAAAGCCGTGCTTGAAGCTCAGTGCCCTGGAATTGT 386 |||||||||||||||||||||||| ||| | |||||||||||||| |||||||||||||| Sbjct 351 AGGGTTTGGCTTCATCGACGCAATTAAATCTGTGCTTGAAGCTCAATGCCCTGGAATTGT 410 Query 387 CTCTTGCGCTGATATTATCGCTCTAGCATCTCGTGACGCTGTCGTTTTCACCGGAGGACC 446 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 411 CTCTTGCGCTGATATTATCGCTCTAGCTTCTCGCGACGCTGTCGTTTTCACCGGAGGACC 470 Query 447 GAATTGGAGTGTACCGACCGGAAGAAGAGACGGGAGGATATCAAACGCATCGGAGGCATT 506 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 471 GAATTGGAGTGTACCGACCGGAAGAAGAGACGGGAGGATATCAAACGCAGCGGAGGCATT 530 Query 507 AGCCAACATTCCTCCTCCGACCAGTAATATCACTAATCTTCAGACACTCTTTGCAAACCA 566 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 531 AGCCAACATTCCTCCTCCAACCAGTAATATCACCAATCTTCAGACACTCTTTGCAAACCA 590 Query 567 AGGACTTGATCTTAAGGACCTTGTTTTACTCTCCGGGGCTCACACTATTGGTGTATCTCA 626 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 591 AGGACTTGATCTTAAGGACCTCGTTTTACTATCCGGGGCTCACACTATTGGTGTATCTCA 650 Query 627 CTGCTCGTCTTTCACAAACCGTCTCTACAATTTCA-GTGGTCGTGGAGACCAAGATCCAG 685 ||||||||||||||||||||||||||||||||| | | |||||||||| ||||||||| | Sbjct 651 CTGCTCGTCTTTCACAAACCGTCTCTACAATTTTACG-GGTCGTGGAGGCCAAGATCCGG 709 Query 686 CCTTAGACAGCGCA-TACGCAGCCAATCTCAAGTCTAGGAAATGTCCTAGCCTCAACGAC 744 | || ||||||| | ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 710 CTTTGGACAGCG-AGTACGCAGCCAATCTCAAGTCTAGAAAATGTCCTAGCCTCAACGAT 768 Query 745 AACAAGACCATCGTTGAGATGGATCCAGGGAGCCGCAAAACATTTGATCTTAGTTATTAC 804 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 769 AACAAGACCATCGTAGAGATGGATCCAGGGAGCCGCAAAACATTTGATCTAAGTTATTAC 828 Query 805 CAGCTCGTTCTCAAGCGTAAAGGTCTGTTTCAGTCAGACTCTGCTCTCACCACTAACCCC 864 |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 829 CAGCTCGTACTCAAGCGTAGAGGTCTGTTTCAATCAGACTCTGCTCTCACCACTAACCCC 888 Query 865 ACAACACTCTCAAACATAAACCGGATCTTGACGGGTTCGGTGGAGAGTTTCTTCTCTGAG 924 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 889 ACAACACTTTCAAACATAAACCGGATCTTGACGGGTTCGGTGGGGAGTTTCTTCTCTGAG 948 Query 925 TTTGCCAAGTCGATGGAGAAAATGGGTCGGATCAATGTCAAGACTGGTTCAGCTGGAGTG 984 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 949 TTTGCCAAGTCAATGGAGAAAATGGGTCGGATCAATGTCAAGACTGGTTCAGCTGGAGTG 1008 Query 985 GTTAGGAGGCAATGTTCCGTTGCAAATAGTTAAGGGGTT-AATATGTAAAAGATTTGGGA 1043 |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 1009 GTTAGGAGGCAATGTTCCGTTGCAAATAGTTAAGGGGTGGAA-ATGTAAAAGATTTGGGA 1067 Query 1044 GTTTGTGGGGG-ATGATTGTGAT 1065 | ||||||||| | | ||||||| Sbjct 1068 GCTTGTGGGGGTA-G-TTGTGAT 1088 Score = 75.0 bits (40), Expect = 1e-12 Identities = 62/71 (87%), Gaps = 8/71 (11%) Strand=Plus/Plus Query 1062 TGATGTGGCCTTTTGGGATTTGTGTGTATGGATTTTGTT-C-G--T-C---AATAAAGAA 1113 ||||||||||||||||||||||||||||||||||||||| | | | | ||||||||| Sbjct 1118 TGATGTGGCCTTTTGGGATTTGTGTGTATGGATTTTGTTACAGACTTCGTCAATAAAGAA 1177 Query 1114 ATAAAAATATT 1124 ||||||| ||| Sbjct 1178 ATAAAAAGATT 1188 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55170398955 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5