BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470549
Length=4546
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:1... 6684 0.0
> AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:1618602-1623452
REVERSE LENGTH=4600
Length=4600
Score = 6684 bits (3619), Expect = 0.0
Identities = 4292/4607 (93%), Gaps = 86/4607 (2%)
Strand=Plus/Plus
Query 1 TCTCTCTGCCCATCTCTCTCTGTTCCATTTTCTGAAACCACT--AAAT------TTTCTC 52
||||||||||||||||||||||||||| |||||||||||| | |||| ||||||
Sbjct 19 TCTCTCTGCCCATCTCTCTCTGTTCCACTTTCTGAAACCAGTGAAAATCAAAAATTTCTC 78
Query 53 TCAAAAGTCAAGAACTTCATCATCTTC--CT------C---TCA---AGTGAAAGATTCA 98
| |||| |||||||||||||||||||| || | | | ||||||||||||
Sbjct 79 TAAAAACTCAAGAACTTCATCATCTTCTTCTCAGACCCGTGTGAGTGAGTGAAAGATTCG 138
Query 99 ATTTTTTCTCCTCTGAAGATCTTTGTGTTTGCTCTAATGGAGTGGATTGGGAAGAGAGTG 158
|||||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 139 ATTTTTTCTCATCTAAAGATCTTTGTGTTTGCTTTAATGGAGTGTATTGGGAAGAGAGTG 198
Query 159 AAGTCCCGGAGCTGGCAGCGTCTTCAGG-TGGTTAACAAGCGGAAGAAGATGGAGACTGT 217
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 199 AAGTCCCGGAGCTGGCAGCGTCTTCAGGCT-GTTAACAAGCGGAAGAAGATGGAGACTGT 257
Query 218 AGCTCCCGTGACATCTCCTCCAAAGAAACGACGGCAGAAGAAA-CGAACGGATC-CTGAT 275
|||||| ||||||||||| |||||||||||||||||||||||| | || | | |||
Sbjct 258 AGCTCCGGTGACATCTCCCCCAAAGAAACGACGGCAGAAGAAACCTAA--AAACTATGAC 315
Query 276 TCTGACATTCAAGACATCACACCAACTTACAACGACCGTGTTCCTCCTCCTCAAGTCAGT 335
|| |||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 316 TCCGACATTGAGGACATCACACCAACTTGCAACGACAGTGTTCCTCCTCCTCAAGTCAGT 375
Query 336 AACAGGTACTCTGCACCTAACAACTCTGTAAAAGAGAGTTTTTCTTGGATAATCAGAGAT 395
|||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 376 AACATGTACTCTGTACCTAACAACTCTGTAAAAGAGAGTTTTTCTAGGATAATGAGAGAT 435
Query 396 CTGAATGTGGAGAAGAAATCAGGTCCAAGCTCCTCTAGGTTAAGAGATGGGTCTGAACAG 455
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||
Sbjct 436 CTGAATGTGGAGAAGAAATCAGGTCCCAGCTCCTCTAGGTTAACAGATGGGTCTGAGCAG 495
Query 456 AACCCATGTGTGAAAGAGAGTTCTTTTAGGGTTAGTGATCTGGGTGTGGAGAAGAAATGT 515
||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||
Sbjct 496 AACCCATGTCTGAAAGAGAGGTCTTTTAGGGTTAGTGATTTGGGCGTGGAGAAGAAATGT 555
Query 516 TCCCC------T---GA----GA--TT---ATACCAGTTCCGAGCTTTTCTAAGTTAAAG 557
||||| | || || || ||||| |||||||| |||||||||||||||
Sbjct 556 TCCCCTGAGATTACAGATTTGGATGTTGGGATACCTGTTCCGAGATTTTCTAAGTTAAAG 615
Query 558 GATGGGTCTGAACAGAAGAACACATGTCTGAATG-AGAAGACTTCTCCTGAGATTACTGA 616
|||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||| ||||
Sbjct 616 GATGTGTCTGAACAGAAGAACACATGTCTG-ATGCAGAAGAGTTCTCCTGAGATTGCTGA 674
Query 617 TTTGGATGTTGTAATATCCGTTCCCAGCTCTTATGTCTTAAAAGATATGTCTGAAGAAAA 676
||||||| |||||||||| ||||| ||||||| ||| ||||||||| |||| |||||||
Sbjct 675 TTTGGATCTTGTAATATCAGTTCCGAGCTCTTCTGTGTTAAAAGATGTGTCAGAAGAAAT 734
Query 677 CAGATTTTTGAAGGAGAAGTGTTCTCCTGAGATTAGAGGTTTGGTTGTT-GAAAAATCAG 735
||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||
Sbjct 735 CAGATTTTTGAAGGACAAGTGTTCCCCTGAGATTAGAGGTTTGGTT-TTGGAAAAATCAG 793
Query 736 TCCTTCGTGAAATAGAGATTCTTTCAGATTCTGAGTCTGAAATTGAAGCTAGAAGAAGAG 795
||| | | |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 794 TCCCTGGCGAAATAGAGATTCTTTCAGATTCTGAGTCTGAAACTGAAGCTAGAAGAAGAG 853
Query 796 CTTCAGCCAAGAAGAAGCTATTTGAGGACAGCAGCAGAATTGTAGAGTCTATCAGTGATG 855
||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct 854 CTTCAGCCAAGAAGAAGCTATTTGAAGAAAGTAGCAGAATTGTAGAGTCTATCAGTGATG 913
Query 856 GCGAAGATAGCACAAGTGAAACCGATGAAGAGGAAGAAGAAAATCAAGATAGTGAAGATA 915
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 GTGAAGATAGCTCAAGTGAAACCGATGAAGAGGAAGAAGAAAATCAAGATAGTGAAGATA 973
Query 916 ATAACACCAAAGATAATATAACGGTGGAGTCTTTGTCTTCTGAGGATCCATCTtcatcat 975
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 ATAACACCAAAGATAATGTAACGGTGGAGTCTTTGTCTTCTGAGGATCCATCTTCATCAT 1033
Query 976 catca---tcatcatcatcatcatcatcTTCCTCTTCTTCCTCGAGTGACGATGAAAT-A 1031
||||| |||||||| || || |||||||||||||| |||||||||||||||| ||| |
Sbjct 1034 CATCATCGTCATCATCGTCGTCTTCATCTTCCTCTTCCTCCTCGAGTGACGATG-AATCA 1092
Query 1032 TATTTAAAGGAGGTAGTTGGAGATAATACAGATGATGATGACTTGAGAAAGGCCAGTTCA 1091
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1093 TATGTAAAGGAGGTAGTTGGAGATAATAGAGATGATGATGACTTGAGAAAGGCCAGTTCA 1152
Query 1092 CCAATCAGGAAAGTCTCTTTAGCGGAAAGGAAGCCTTTGGTAAGGTATAAGAGGTCTGGT 1151
||||||| || ||| ||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1153 CCAATCAAGAGAGTTTCTTTAGTGGAAAGGAAGGCTTTGGTAAGGTATAAGAGGTCTGGT 1212
Query 1152 TCTAGCTTAACCAAGCCTATaaaaaag-gacaagaagattcagaaactaaaccaccgaga 1210
||||||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||
Sbjct 1213 TCTAGCTTAACCAAGCCTA-GAGAAAGAGACAACAAGATTCAGAAACTAAACCACCGAGA 1271
Query 1211 agaagaagaaaaagaaCGACAAGGAGAAGTTGTAAGAGTAGTAACAAAGCAGCCGAGCAA 1270
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1272 AGAAGAAAAAAAAGAACGACAAAGAGAAGTTGTAAGAGTAGTAACAAAGCAGCCGAGCAA 1331
Query 1271 TGTTGTGTTCACTTGTGCTCATTGTGGCAAAGAGAACACAGGAATCCCTGAATCTCACAG 1330
|||||||| |||||||||||| |||||||||||||||||||||| ||||||||| |||||
Sbjct 1332 TGTTGTGTACACTTGTGCTCACTGTGGCAAAGAGAACACAGGAAACCCTGAATCACACAG 1391
Query 1331 CTCTTTCATTAGACCACATTCATTAAGAGATGAAATTGAGGATGTGAACAACTTTGCTTC 1390
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1392 CTCTTTCATTAGACCACATTCAATAAGAGATGAAATTGAGGATGTGAACAACTTTGCTTC 1451
Query 1391 TACTAATGTATCAAAGTATGAAGATTCTGTTTCCATCAACTCTGGGAAGACAACTGGAAA 1450
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1452 TACTAATGTATCAAAGTATGAAGATTCTGTTTCCATCAACTCTGGGAAAACAACTGGAGC 1511
Query 1451 TCCATCCAGACCTGAAGTGGAGAATGCAGAGACAGGAAAAGAAGTaaaaaaaTTTGAGAA 1510
||||||||||||||||||||||||| ||||||||||||||||| | || | | ||||||
Sbjct 1512 TCCATCCAGACCTGAAGTGGAGAATCCAGAGACAGGAAAAGAATTGAACACACCTGAGAA 1571
Query 1511 GCCATCCATATCCAGACCTGAAACTTTCACTACAGAGAAAGCAAAAGAGGTACAAGTACC 1570
||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||
Sbjct 1572 GCCATCCATATCCAGACCTGAAATTTTCACTACAGAGAAAGCGATAGATGTACAAGTACC 1631
Query 1571 TGAAAAGCCATCAACACCTGAAATTTTCGGTTCAGAGAAAGCAAAAGAGGTACAAGCACC 1630
|||| ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1632 TGAAGAGCCATCAAGACCTGAAATTTACAGTTCAGAGAAAGCAAAAGAGGTACAAGCACC 1691
Query 1631 TGAAATGCCATCAAGACCTG-AGATTTTCAGTTCAGAGAAAACAAAAGAGCCACAAGCAC 1689
|||||||||||||||||||| || ||||||||||||||||| ||||||| ||||| ||
Sbjct 1692 TGAAATGCCATCAAGACCTGAAG-TTTTCAGTTCAGAGAAAGCAAAAGAAATACAAGTAC 1750
Query 1690 CTGAAATGCCTTCAAGACCTGAGATTTTCAG--TTCAGAGAAAGCAAAAGAGGTCCAAGC 1747
|||||||||| |||| |||||| | | ||| |||||||||||||||||||||||||||
Sbjct 1751 CTGAAATGCCATCAATACCTGA-A-ATCCAGAATTCAGAGAAAGCAAAAGAGGTCCAAGC 1808
Query 1748 CAATAACAGCTTTGGTTTGATGACACCTACAGTTGCAGTTGCGGAGGGGTTAAATAAGTC 1807
||| ||||| | ||||||| |||| | | ||||||||| |||||||||||||||||
Sbjct 1809 CAACAACAGGATGGGTTTGACGACA-C--C---TGCAGTTGCAGAGGGGTTAAATAAGTC 1862
Query 1808 TGTTGTGACTAATGAACATGTTGATGATGACTCTGACTCTTCTATTAGCTCTGCAGATGG 1867
||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||
Sbjct 1863 TGTTGTGACTAATGAACATATTGAAGATGACTCTGATTCTTCTATTAGCTCTGGAGATGG 1922
Query 1868 ATATGAATCTGATCCTACTCTAAAAGACAAAGAGGTCAAGGTTAATAACAACTCGGATTG 1927
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1923 ATATGAATCTGATCCTACTCTAAAAGACAAAGAGGTCAAGATTAATAACCACTCGGATTG 1982
Query 1928 GAGAATGA-TGAATGGAAACCATAAAGAAGTTGATCTATTCAGGCTTCTTGTAAACTCTG 1986
|||||| | ||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1983 GAGAAT-ATTGAATGGAAACAATAAAGAAGTTGATCTATTCAGGCTTCTTGTGAACTCTG 2041
Query 1987 TTTGGGAGAAAGGTCAATTAGGTGAGGGAGAGGAAGAAGCAGACGAACTAATTTCTTTAC 2046
|||||||||||||||||||||| || |||||| ||||||||||||||| |||||| |
Sbjct 2042 TTTGGGAGAAAGGTCAATTAGGCGA---AGAGGATGAAGCAGACGAACTAGTTTCTTCAG 2098
Query 2047 CTGAAGACCAATCTCAAGAACAAGCAAAGGAAGATCAAAGAAAATATGATGATGATGGAC 2106
||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||
Sbjct 2099 CTGAAGACCAATCTCAAGAACAAGCAAGGGAAGATCACAGAAAATATGATGATGCTGGAC 2158
Query 2107 TTCTAATCATTAGGCCACCACCATTGATAGAGAGATTTGGTGTGGAGGAGCCTGAATCAC 2166
||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||
Sbjct 2159 TTCTAATCATTAGGCCACCACCATTGATAGAGAAATTTGGTGTGGAGGAGCCTCAGTCAC 2218
Query 2167 CACCTGTGGTTTCTGAGTTAGATTCAGAGGAAGAGACGTTGTGGGAAGAACTAGCATTTT 2226
||||||||||||||||| | |||||||||||||| | | |||||||||||||||||||||
Sbjct 2219 CACCTGTGGTTTCTGAGATCGATTCAGAGGAAGATAGGCTGTGGGAAGAACTAGCATTTT 2278
Query 2227 TCAGTAAATCTAATGAAATCGGCGGCAACGAGCTTCCTTCAAATGTAGAGAAAGATATAT 2286
||| ||||||||| || |||||||||||||||||| |||||||||||||||| ||||||
Sbjct 2279 TCACTAAATCTAACGACATCGGCGGCAACGAGCTTTTTTCAAATGTAGAGAAAAATATAT 2338
Query 2287 CAACTAAAGAAACTCCAGCAGCACAATGTAAAAAAGGGAATCACGAGCTGTGTCTTGATC 2346
|| |||| |||||||||||||||||||||||||||||||| ||||| || ||| ||||||
Sbjct 2339 CAGCTAATGAAACTCCAGCAGCACAATGTAAAAAAGGGAAACACGATCTATGTATTGATC 2398
Query 2347 TTGAGGTTGGTTTGAAGTGTATGCACTGTGGCTTCGTGGAGAGAGAGATCCGAAGCATGG 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2399 TTGAGGTTGGTTTGAAGTGTATGCACTGTGGCTTCGTGGAGAGAGAGATCCGAAGCATGG 2458
Query 2407 ATGTATCTGAGTGGGGAGAGAAGATTACACGGGAAAGGAGAAAAATTGATAGATTTGAAG 2466
|||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||
Sbjct 2459 ATGTATCTGAGTGGGGAGAGAAGACTACAAGGGAAAGGAGAAAATTTGATAGATTTGAAG 2518
Query 2467 AGGAAGAAGGCAGCAGCTTCATTGGGAAACTTGGTTTTGAACCTCCTAACAACAGCTTAA 2526
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2519 AGGAAGAAGGCAGCAGCTTCATTGGGAAACTTGGGTTTGATGCTCCTAACAACAGCTTAA 2578
Query 2527 ATGAGGGATGTATTTCTTCTGAAGGAACTGTTTGGGATAAGATCCCAGGGGTCAAATCTC 2586
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2579 ATGAGGGATGTGTTTCTTCTGAAGGAACTGTTTGGGATAAGATCCCAGGGGTCAAATCTC 2638
Query 2587 AAATGTATCCTCACCAGCAAGAGGGTTTTGAGTTTATCTGGAAGAACTTAGCCGGTACAA 2646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2639 AAATGTATCCTCACCAGCAAGAGGGTTTTGAGTTTATCTGGAAGAACTTAGCCGGTACAA 2698
Query 2647 TCTTGTTGAACGAGCTCAAGGACTTTGAGAACAGCGATGAGACCGGAGGATGCATCATGT 2706
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2699 TCATGTTGAACGAGCTCAAGGACTTTGAGAACAGTGATGAGACCGGAGGATGCATCATGT 2758
Query 2707 CACACGCTCCCGGGACAGGAAAAACTCGCCTGACCATCATTTTCCTGCAAGCCTATCTTC 2766
|||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2759 CACATGCTCCCGGGACCGGAAAAACTCGTCTGACCATCATTTTCCTGCAAGCCTATCTTC 2818
Query 2767 AATGCTTCCCAGATTGCAAACCAGTGATCATTGCTCCTGCAAGCTTGCTTCTCACATGGG 2826
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2819 AATGCTTCCCAGATTGCAAACCAGTGATCATTGCTCCTGCGAGCTTGCTTCTCACATGGG 2878
Query 2827 CAGAGGAGTTCAAGAAATGGAACATAAGCATTCCCTTTCATAATCTCAGCAGTTTGGACT 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 CAGAGGAGTTCAAGAAATGGAACATAAGCATTCCCTTTCATAATCTCAGCAGTTTGGACT 2938
Query 2887 TTACTGGGAAAGAGAGCTCCGCGGCACTGGGGCTTTTGATGCAGAAGAATGCCACTGCAA 2946
||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2939 TTACTGGGAAAGAGAACTCGGCGGCGCTGGGACTTTTGATGCAGAAGAATGCCACTGCAA 2998
Query 2947 GAAGCAATAATGAGATAAGGATGGTGAAAATATACTCTTGGATAAAATCGAAGAGCATAC 3006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2999 GAAGCAATAATGAGATAAGGATGGTGAAAATATACTCTTGGATAAAATCGAAGAGCATAC 3058
Query 3007 TCGGGATCAGCTACAACCTCTATGAGAAGCTTGCAGGAGTTAAAGACGAGGACAAAAAGA 3066
|||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||
Sbjct 3059 TCGGGATCAGCTACAATCTGTATGAGAAGCTTGCAGGAGTTAAGGACGAGGACAAAAAGA 3118
Query 3067 CAAAGACAGTGAGAGAAGTGAAACCAGACAAAGAATTAGATGATATCAGAGAGATACTTA 3126
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3119 CAAAGATGGTGAGAGAAGTGAAGCCAGACAAAGAATTAGATGATATCAGAGAGATACTTA 3178
Query 3127 TGGGAAGGCCTGGACTTCTTGTTCTTGACGAGGCACACACGCCTCGGAACCAGAGAAGTT 3186
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3179 TGGGAAGGCCTGGACTTCTTGTTCTTGACGAGGCACACACACCTCGGAACCAGAGAAGTT 3238
Query 3187 GTATATGGAAAACACTATCCAAAGTGGAAACACAGAAACGTATCTTGCTTTCTGGAACTC 3246
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 3239 GTATATGGAAAACACTATCCAAAGTGGAAACACAGAAACGAATCTTGCTCTCTGGAACTC 3298
Query 3247 CTTTCCAGAACAACTTCCAGGAGCTGTGCAATGTTTTGGGACTCGCAAGACCTAAATATC 3306
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3299 CTTTCCAGAACAACTTCCTGGAGCTGTGCAATGTTTTGGGACTCGCAAGACCTAAATATC 3358
Query 3307 TGGAAAGGCTCACATCCACACTCAAGAAGAGTGGGATGACTGTAACAAAGAGA-GGaaaa 3365
|||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 3359 TGGAGAGGCTCACGTCCACACTCAAGAAGAGTGGGATGACTGTAACGAAGAGAGGGAAAA 3418
Query 3366 aaaGCTTTGGGGAATGAAATCAACAACCGTGGGATCGAAGAGCTGAAGGCTGTTATGCTT 3425
||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3419 AAA-ATTTGGGGAATGAAATCAACAACCGTGGGATTGAAGAGCTGAAGGCTGTTATGCTT 3477
Query 3426 CCATTTGTGCATGTCCATAAAGGAAGCATTCTTCAAAGTAGCCTCCCTGGTTTGAGAGAA 3485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3478 CCATTTGTGCATGTCCATAAAGGAAGCATTCTTCAAAGTAGCCTCCCTGGTTTGAGAGAA 3537
Query 3486 TGTGTTGTGGTGTTAAACCCACCTGAGCTGCAGAGGAGAGTCCTAGAATCCATTGAAGTC 3545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3538 TGTGTTGTGGTGTTAAACCCACCTGAGCTGCAGAGGAGAGTCCTAGAATCCATTGAAGTC 3597
Query 3546 ACTCACAACCGGAAAACAAAAAACGTGTTTGAAACAGAACACAAGCTGTCTCTGGTCTCA 3605
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3598 ACTCACAACCGGAAAACAAAAAACGTGTTTGAAACAGAACACAAGCTGTCTTTGGTCTCA 3657
Query 3606 GTCCATCCTTCTCTAGTCTCTCGCTGCAAACTTTCTGAGAAGGAACGTTTGTCCATCGAT 3665
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3658 GTCCATCCTTCTCTAGTCTCTCGCTGCAAAATTTCTGAGAAGGAACGTTTGTCCATCGAC 3717
Query 3666 GAGGCTTTGCTTGCACAGCTTAAGAAGGTAAGACTTGATCCAAACCAAAGTGTGAAAACG 3725
|||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 3718 GAGGCTCTGCTTGCACAGCTTAAGAAGGTAAGACTCGATCCAAATCAAAGCGTGAAAACA 3777
Query 3726 AGATTCCTCATGGAGTTCGTCGAGTTATGCGAGGTGATAAAGGAGAAAGTGTTGGTCTTC 3785
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3778 AGATTCCTCATGGAGTTTGTCGAGTTATGCGAGGTGATAAAGGAGAAAGTGTTGGTCTTT 3837
Query 3786 AGCCAATACATCGACCCATTGAAACTGATCATGAAACATCTGGTCTCTCGTTTCAAGTGG 3845
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3838 AGCCAATACATAGACCCATTGAAACTGATAATGAAACATCTGGTCTCTCGTTTCAAGTGG 3897
Query 3846 AATCCAGGGCAGGAAGTGCTGTACATGCATGGCAAACTCGAGCAAAAACAAAGACAAACC 3905
||||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||
Sbjct 3898 AATCCAGGGGAGGAAGTGTTGTACATGCACGGCAAACTCGAGCAGAAACAAAGACAAACA 3957
Query 3906 TTGATCAACGAATTCAATGATCCAAAATCCAAGGCCAAAGTGTTCTTAGCTTCAACAAAA 3965
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3958 TTAATCAACGAATTCAATGATCCAAAATCCAAGGCCAAAGTGTTCTTAGCTTCAACAAAA 4017
Query 3966 GCCTGCTCTGAAGGGATCAGTCTGGTAGGAGCATCAAGGGTGATTCTTTTGGATGTTGTG 4025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4018 GCCTGCTCTGAAGGGATCAGTCTGGTAGGAGCATCAAGGGTGATTCTTTTGGATGTTGTG 4077
Query 4026 TGGAATCCGGCAGTGGAAAGACAAGCTATAAGCCGTGCTTACAGAATCGGACAGCAGCGG 4085
|||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 4078 TGGAATCCTGCAGTCGAAAGACAAGCTATAAGCCGTGCTTACAGAATCGGGCAGAAGCGG 4137
Query 4086 ATTGTTTACACATATCACTTGGTTGCAAAAGGAACTCCTGAGGGACCAAAATACTGTAAG 4145
|||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 4138 ATTGTTTACACATACCACTTGGTTGCAAAAGGGACTCCTGAGGGACCAAAGTACTGTAAG 4197
Query 4146 CAAGCACAAAAGGATAGGATCTCAGAGCTTGTGTTTGCATGCTCTTCAAGACATGACAAA 4205
||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 4198 CAAGCACAAAAGGATAGAATCTCAGAGCTTGTGTTTGCATGTTCTTCCAGACATGACAAA 4257
Query 4206 GGAAAGGAAAAGATTGCTGAAGTTGTGACAGAGGATAAAGTGTTGGACACTATGGTGCAG 4265
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 4258 GGAAAGGAAAAGATTGCTGAAGCTGTGACAGAGGATAAAGTGTTGGACACTATGGTGGAG 4317
Query 4266 CATTCGAAGCTTGGGGATATGTTTGACAATCTCATCGTCCAACCAAAGGAAGCAGATTTA 4325
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 4318 CATTCGAAGCTTGGGGATATGTTTGACAATCTTATCGTGCAACCAAAGGAAGCAGATTTA 4377
Query 4326 GTTGAAGGTTTCAGCATTCTTATGCCATGAGTCATCACAAAACTCTTGGCTTCATTCATC 4385
||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| | ||
Sbjct 4378 GTTGAAGGTTTCAGCATACTTATGCCATGACTCATCACCAAACTCTTGGCTTCAT-C-TC 4435
Query 4386 T-CTTCCCTATAATATCT--TATGCCATTTCATGTTTCCAAGACTTGTGTTTTGCATTTG 4442
| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 4436 TTCTTCCCTATA-TATCTCATATGCCATTTCATCTTTCCAAGACTTGTGTTTTGCTTTTG 4494
Query 4443 TATGATCCTTTTGGGCAACTTCTTTCTCGGAAAAA-CCTAGGCTTTTGTCTGGATTT-CA 4500
| ||||||||| ||| | |||||||||| |||||| ||| | ||||||| ||| ||| |
Sbjct 4495 TGTGATCCTTTAGGGTATCTTCTTTCTCAGAAAAAACCTTGACTTTTGTTTGGGTTTACT 4554
Query 4501 TTATGTCTGCTATGAACTCT-AACTTATATAGCAAAATGTTTCATGT 4546
|| ||||| ||||||||||| ||||||| ||||||||||||||||||
Sbjct 4555 TT-TGTCTACTATGAACTCTTAACTTATCTAGCAAAATGTTTCATGT 4600
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 226704415417
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5