BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470550 Length=1955 Score E Sequences producing significant alignments: (Bits) Value AT1G05500.1 | Symbols: SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1, S... 2953 0.0 > AT1G05500.1 | Symbols: SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1, SYT5 | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:1624955-1629224 FORWARD LENGTH=2110 Length=2110 Score = 2953 bits (1599), Expect = 0.0 Identities = 1691/1736 (97%), Gaps = 4/1736 (0%) Strand=Plus/Plus Query 76 TACGGACATTGCAA-TTTTCGAAATCCGGCGA-TATAA-ATGGGTTTCATAGTCGGCGTT 132 |||||||||||||| ||||| ||||||||||| || || ||||||||||||||||||||| Sbjct 106 TACGGACATTGCAATTTTTCTAAATCCGGCGATTA-AATATGGGTTTCATAGTCGGCGTT 164 Query 133 GTGATCGGACTCGTCGTCGGAGTCGCAATCATCATCGGCTTTGTCAAGTTGGAGAATTCT 192 || ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 165 GTAATCGGACTCCTCGTCGGAATCGCAATCATCATCGGCTTTGTCAAGTTGGAGAATTCT 224 Query 193 CGATCCAAGCTTCGCTCTGAACTTGCGAATACGGTGGCTGCTTTTGCGAGGATGACGGTG 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 CGATCCAAGCTTCGCTCTGAACTTGCGAATACGGTGGCTGCTTTTGCGAGGATGACGGTG 284 Query 253 GAGGATTCCAGGAAGCTTTTGCCTCCTGAGTTTTATCCTTCCTGGGTTGTCTTCTCCGAG 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 285 GAGGATTCCAGGAAGCTTTTGCCTCCTGAGTTTTATCCTTCCTGGGTTGTCTTCTCCGAG 344 Query 313 CGTCAGAAGTTGACTTGGCTCAACCATCACTTGACAAAGATCTGGCCTTATGTTGATGAG 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 345 CGTCAGAAGTTGACTTGGCTCAACCATCACTTGACAAAGATCTGGCCTTATGTTGATGAG 404 Query 373 GCAGCCTCTGAGCTTATAAAGGCATCCGTGGAGCCTGTTCTCGAGCAATATAGACCTGCC 432 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 405 GCAGCCTCTGAGCTTATAAAGGCATCCGTGGAGCCTGTTCTTGAGCAATATAGACCTGCC 464 Query 433 ATAGTGGCCTCCTTAACGTTTTCTAAGCTTACTCTCGGTACAGTGGCGCCTCAATTTACA 492 || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 465 ATTGTGGCCTCCTTAACATTTTCTAAGCTTACTCTCGGTACAGTGGCACCTCAATTTACA 524 Query 493 GGTGTTTCCATTATCGACGGTGATAAAAATGGGGTGACCATGGAACTTGATATGCAATGG 552 ||||||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct 525 GGTGTTTCCGTTATCGACGGTGATAAAAATGGGATTACCTTGGAACTTGATATGCAATGG 584 Query 553 GATGGAAATCCAAATATAGTACTTGGCGTCAAGACCTTAGTTGGTGTATCTCTCCCAATT 612 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 585 GATGGAAACCCAAATATAGTACTTGGCGTCAAGACCTTAGTTGGTGTATCCCTCCCCATT 644 Query 613 CAGGTGAAAAATATTGGATTCACTGGTGTTTTCAGGCTGATTTTTAGGCCACTAGTTGAA 672 ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 645 CAGGTGAAAAACATCGGATTCACTGGTGTTTTCAGGCTAATTTTTAGGCCACTAGTTGAG 704 Query 673 GACTTTCCTTGCTTTGGAGCTGTCAGCGTTTCTCTTAGAGAAAAGAAAAAATTGGACTTC 732 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 705 GACTTTCCCTGCTTTGGAGCTGTCAGCGTTTCTCTTAGAGAAAAGAAAAAATTGGACTTC 764 Query 733 ACCCTTAAGGTTGTTGGAGGTGATATTTCAGCAATTCCTGGACTTTCTGAAGCCATTGAG 792 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 765 ACCCTTAAGGTTGTTGGAGGTGATATTTCAGCAATTCCTGGACTTTCTGAAGCTATTGAG 824 Query 793 GAAACAATTCGGGATGCCGTGGAAGATTCTATCACATGGCCTGTTCGGAAGGTCATCCCA 852 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 825 GAAACAATTCGGGATGCCGTGGAAGATTCTATCACATGGCCTGTTCGGAAGGTCATCCCA 884 Query 853 ATTATACCTGGTGATTATAGCGATCTGGAGCTAAAGCCTGTTGGAATGTTGGAGGTGAAG 912 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 885 ATTATACCTGGTGATTATAGCGATCTGGAGCTAAAGCCTGTTGGAATGTTAGAGGTGAAG 944 Query 913 CTTGTGCAAGCAAAGAACTTGACCAACAAAGATCTAGTTGGAAAATCAGACCCCTTTGCT 972 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 945 CTTGTGCAAGCAAAGAACTTGACCAACAAAGATCTAGTTGGAAAATCAGACCCCTTTGCT 1004 Query 973 AAAATGTTTATACGCCCTTTGCGAGAAAAGACTAAAAGAAGCAAGACAATTAACAATGAC 1032 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1005 AAAATGTTTATACGCCCTTTGCGTGAAAAGACTAAAAGAAGCAAGACAATTAACAATGAC 1064 Query 1033 CTGAATCCCATCTGGAATGAGCATTTTGAATTTGTTGTCGAAGACGCGTCAACTCAACAT 1092 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1065 CTGAATCCCATCTGGAATGAGCATTTTGAATTTGTTGTGGAAGACGCGTCAACTCAACAT 1124 Query 1093 TTAGTGGTCAGAATATATGATGACGAGGGTGTACAAGCATCTGAGCTTATCGGGTGTGCC 1152 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1125 TTAGTGGTCAGAATATATGATGACGAGGGTGTACAAGCATCTGAGCTTATTGGTTGTGCC 1184 Query 1153 CAAATCCGGCTTTGTGAACTCGAACCTGGTAAAGTGAAAGACGTCTGGTTGAAGCTGGTC 1212 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1185 CAAATCCGGCTTTGTGAACTTGAACCTGGTAAAGTGAAAGACGTCTGGTTGAAGCTGGTC 1244 Query 1213 AAAGATTTGGAGATCCAGAGAGATACCAAGAACCGTGGAGAGGTTCACCTTGAGCTCCTT 1272 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1245 AAAGATTTGGAGATCCAGAGAGATACTAAGAACCGTGGAGAGGTTCACCTTGAGCTCCTT 1304 Query 1273 TACGTCCCTTATGGTTCGGGAAACGGCATCGTAAATCCCTTTGTCACTTCATCGATGACT 1332 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1305 TACATCCCTTATGGTTCGGGAAACGGCATTGTAAATCCCTTTGTCACTTCATCGATGACG 1364 Query 1333 TCCTTAGAGAGGGTGCTCAAGAATGATACAACAGATGAAGAAAATGCATCAAGCCGTAAA 1392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1365 TCCTTAGAGAGGGTGCTCAAGAATGATACAACAGATGAAGAAAATGCATCAAGCCGTAAA 1424 Query 1393 AGAAAAGATGTCATTGTAAGAGGAGTGCTCTCTGTGACAGTGATATCTGCAGAAGAGATA 1452 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1425 AGAAAAGATGTCATTGTAAGAGGAGTTCTCTCTGTGACAGTGATATCTGCAGAAGAGATA 1484 Query 1453 CCAATACAAGATCTGATGGGGAAAGCTGATCCATATGTTGTTCTCTCGATGAAGAAATCA 1512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1485 CCAATACAAGATCTGATGGGGAAAGCTGATCCATATGTTGTTCTCTCGATGAAGAAATCA 1544 Query 1513 GGTGCCAAGAGCAAAACTCGGGTCGTCAATGACAGCTTGAACCCGGTTTGGAACCAGACT 1572 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1545 GGTGCCAAGAGCAAAACTCGGGTCGTCAATGACAGCTTGAACCCGGTATGGAACCAGACT 1604 Query 1573 TTTGATTTTGTAGTTGAAGACGGGTTACACGATATGCTAGTCCTTGAAGTCTGGGACCAC 1632 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1605 TTTGATTTTGTAGTTGAAGACGGGTTACATGATATGCTAGTCCTTGAAGTCTGGGACCAC 1664 Query 1633 GACACCTTTGGAAAGGACTACATTGGCAGATGTATCCTCACGTTGACAAGGGTTATAATG 1692 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1665 GACACCTTTGGAAAGGACTACATTGGGAGATGTATCCTCACGTTGACAAGGGTTATAATG 1724 Query 1693 GAAGAGGAATACAAAGACTGGTACCCATTAGACGAATCCAAAACGGGCAAGCTTCAGTTG 1752 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1725 GAAGAGGAGTACAAAGACTGGTACCCATTAGACGAATCCAAAACGGGCAAGCTTCAGCTG 1784 Query 1753 CATCTCAAGTGGATGGCTCAATCAATTTATCGCGATTCCTAAGCTTAATGGGAAGA 1808 ||||| |||||||||||||||||||||||||| |||||||||||||||| || ||| Sbjct 1785 CATCTGAAGTGGATGGCTCAATCAATTTATCGTGATTCCTAAGCTTAATCGGTAGA 1840 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96836851305 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5