BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470571
Length=3500
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) s... 3422 0.0
AT1G05675.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1929 0.0
AT1G05680.1 | Symbols: UGT74E2 | Uridine diphosphate glycosyltr... 1581 0.0
> AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1697587-1701025 REVERSE LENGTH=3227
Length=3227
Score = 3422 bits (1853), Expect = 0.0
Identities = 2041/2134 (96%), Gaps = 3/2134 (0%)
Strand=Plus/Plus
Query 1368 TCAGATTTCTCAACTTTAACCGATACTAGACCTTTTCCTGATTATTCACCAAAGAAATCT 1427
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 321 TCAG-TTTCTCAACTTTAACCGATACGAGACCTTTTCCTGATTATTCACCAAAGAAAGCT 379
Query 1428 TCAGTGAGAGACACTGAGTTTGTACATCAAATCACCAATGTGATTAAGCTGCGTCGGGCT 1487
||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| |||||
Sbjct 380 TCAGTGAGAGACACTGAATTTGTACATCAAATCACTAATGTGATTAAGCTTCGTAGGGCT 439
Query 1488 GAGCCTCTGAGGCGGAGTTTAAAGCCTTATGAATGCAAGTTCAAGACTGATCATTTGATT 1547
|||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 440 GAGCCTTTGAGGAGGAGTTTAAAGCCTTATGAATGCAAATTCAAAACTGATCATTTGATT 499
Query 1548 TGGGTTCTGATGAAGATTAAGTGTGATTACAGGTTGGTTCTTGATTTCTTTGATTGGGCT 1607
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 500 TGGGTTCTGATGAAGATTAAGTGTGATTACAGGTTGGTTCTTGACTTCTTTGATTGGGCT 559
Query 1608 CGCTCCCGCAGAGACTCCAACCTTGAATCCCTTTGCATTGTTATTCATTTGGCTGTGGCG 1667
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 560 CGCTCCCGCAGAGACTCCAACCTTGAATCTCTTTGCATTGTTATTCATTTGGCTGTGGCG 619
Query 1668 TCTAAGGATCTAAAAGTGGCTCAGTCTCTCATTAGCAGTTTTTGGGAGAGACCAAAGTTG 1727
||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||
Sbjct 620 TCTAAGGATCTAAAAGTGGCTCAGTCTCTTATAAGTAGTTTCTGGGAGAGACCAAAGTTG 679
Query 1728 AATGTTACTGAATCCTTTGTACAGTTTTTTGATCTTTTAGTATATACTTACAAGGACTGG 1787
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 680 AATGTTACTGATTCCTTTGTACAGTTTTTTGATCTTTTAGTATACACTTACAAGGACTGG 739
Query 1788 GGTTCGGATCCTCGTGTATTCGATGTTTTCTTCCAAGTACTCGTCGAATTCGGAATGCTC 1847
||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||
Sbjct 740 GGTTCGGATCCTCGTGTATTCGATGTTTTCTTCCAAGTACTTGTTGATTTCGGATTGCTC 799
Query 1848 CCTGAGGCGAGAAAAGTCTTTGAGAAGATGTTGAATTACGGATTGGTTTTATCTGTTGAT 1907
| ||||||||||| ||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 800 CGTGAGGCGAGAAGAGTATTTGAGAAGATGTTGAACTACGGATTGGTTTTGTCTGTTGAT 859
Query 1908 TCTTGCAACGTATACCTTGCCCGTCTTTCGAAAGATTGCAATAAAACTGCAACAGCAATT 1967
||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||||
Sbjct 860 TCTTGCAACGTGTACCTTACCCGTCTTTCTAAAGATTGCTATAAAACTGCAACAGCAATC 919
Query 1968 ATAGTGTTCAGGGAATTTCCGGAAGTGGGTGTTTGTTGGAATGTTGCTTCTTATAACATC 2027
||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 920 ATAGTATTCAGGGAGTTTCCGGAAGTGGGTGTTTGCTGGAATGTTGCTTCTTATAACATC 979
Query 2028 GTTATTCATTTTGTTTGTCAACTTGGGAGGATAAACGAAGCCCACCATCTACTCCTGCTT 2087
|| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 980 GTCATTCATTTTGTTTGTCAACTTGGGAGAATAAAAGAAGCCCACCATCTACTCCTGCTT 1039
Query 2088 ATGGAGTTGAAGGGCTACACCCCTGATGTAATCAGTTACAGTACAGTGATAAATGGATAT 2147
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 1040 ATGGAGTTGAAGGGCTACACACCTGATGTAATCAGTTACAGTACAGTGGTAAATGGATAC 1099
Query 2148 TGTAGATTTGGGGAACTTGACAAGGTTTGGAAGCTCATTGAAGAAATGAAACAG-AAGGG 2206
||||| ||||||||||||||||||||||||||||||||||||| |||||||| | |||||
Sbjct 1100 TGTAGGTTTGGGGAACTTGACAAGGTTTGGAAGCTCATTGAAGTAATGAAACGGAAAGGG 1159
Query 2207 CCTGAAGCCGAATTCTTATACTTATGGTAGTATAATTGGTTTGCTCTGCAGGATTTGTAA 2266
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 1160 -CTGAAGCCGAATTCTTATATTTATGGTAGTATAATTGGTTTGCTCTGCAGAATTTGTAA 1218
Query 2267 GCTAGCCGAAGCAGAGAAGGCTTTTTCAGAGATGATAGGGCAGGGCATACTTCCTGACAC 2326
|||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 1219 GCTAGCCGAAGCAGAGGAGGCTTTTTCAGAGATGATAAGGCAGGGAATACTTCCTGACAC 1278
Query 2327 TATAGTGTACACAACTCTTGTTGATGGTTTCTGCAAGCGAGGGGATATCCGGGCTGCATC 2386
| |||| |||||||||||| |||||||||| ||||||||||||||||| |||||||||||
Sbjct 1279 TGTAGTATACACAACTCTTATTGATGGTTTTTGCAAGCGAGGGGATATTCGGGCTGCATC 1338
Query 2387 GAAGtttttttATGAGATGCACTCTCGGGATATTACACCAGATGTTTTGACATATACTGC 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339 GAAGTTTTTTTATGAGATGCACTCTCGGGATATTACACCAGATGTTTTGACATATACTGC 1398
Query 2447 TATTATATCAGGGTTTTGTCAGATTGGCGACATGGTGGAGGCTGGTAAACTATTTCATGA 2506
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1399 TATTATATCAGGGTTTTGTCAGATTGGCGACATGGTAGAGGCTGGTAAACTATTTCATGA 1458
Query 2507 AATGCTTTGCAGGGGTTTAGAGCCGGATATCATTACTTTTACTGAACTTATGAATGGATA 2566
|||| |||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||
Sbjct 1459 AATGTTTTGCAAGGGTTTAGAGCCGGATAGCGTTACTTTTACTGAACTTATAAATGGATA 1518
Query 2567 CTGCAAAGCAGGGCATATAAAAGATGCTTTTAGGGTCCACAATCACATGATTCAGGCTGG 2626
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1519 TTGCAAAGCAGGGCATATGAAAGATGCTTTTAGGGTCCACAATCACATGATTCAGGCTGG 1578
Query 2627 GTGCTCCCCAAATGTTGTTACATACACCACATTAATTGATGGGCTTTGTAAGGAAGGGGA 2686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1579 GTGCTCCCCAAATGTTGTTACATACACCACATTAATTGATGGGCTTTGTAAGGAAGGGGA 1638
Query 2687 CTTAGATTCAGCGAATGAACTTCTCCATGAAATGTGGAAAATAGGTCTTCAGCCAAATAT 2746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1639 CTTAGATTCAGCGAATGAACTTCTCCATGAAATGTGGAAAATAGGTCTTCAGCCAAATAT 1698
Query 2747 TTTTACTTATAATTCCATTGTCAATGGTCTATGTAAGTCGGGTAATATCGAGGAGGCAGT 2806
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1699 TTTTACTTATAATTCCATTGTCAATGGTCTATGTAAGTCGGGTAATATTGAGGAGGCAGT 1758
Query 2807 TAAACTCGTTGGAGAATTTGAAGCTGCGGGACTTAATGCAGACACTGTAACTTATACAAC 2866
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1759 TAAACTTGTTGGAGAATTTGAAGCTGCGGGGCTTAATGCAGACACTGTAACTTATACAAC 1818
Query 2867 CTTAATGGATGCCTACTGTAAATCAGGGGAGATGGATAAGGCTCAAGAGATTTTGATGGA 2926
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1819 CTTAATGGATGCCTACTGTAAATCAGGGGAGATGGATAAGGCTCAAGAGATTTTGAAGGA 1878
Query 2927 GATGCTCGGGAAAGGGCTTCAACCTACTATTGTCACGTTCAACGTTCTAATGAATGGTTT 2986
||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct 1879 GATGCTCGGCAAAGGGCTTCAACCCACTATTGTCACATTCAACGTCCTAATGAATGGCTT 1938
Query 2987 TTGTTTGCATGGGATGTTGGAAGATGGTGAGAAGCTATTAAATTGGATGTTGGCAAAGGG 3046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1939 TTGTTTGCATGGGATGTTGGAAGATGGTGAGAAGCTATTAAATTGGATGTTGGCAAAGGG 1998
Query 3047 TATAGCGCCTAATGCAACCACATTTAATTCTCTCGTGAAGCAATATTGCATTAGAAATAA 3106
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1999 TATAGCGCCTAATGCAACCACATTTAATTCTCTCGTGAAGCAATATTGTATTAGAAATAA 2058
Query 3107 CCTGAAGGCAGCAACTGCAATTTATAAAGACATGTGTTCGCGGGGAGTAGAACCTGATGG 3166
||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct 2059 CCTGAAGGCAGCAACTGCAATTTATAAGGACATGTGTTCGCGAGGAGTAGGACCTGATGG 2118
Query 3167 TAAGACGTATGAGAATTTAGTTAAAGGCCATTGCAAAGCTAGGAACATGAAGGAAGCATG 3226
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2119 TAAGACGTATGAGAATTTAGTTAAAGGCCATTGCAAGGCTAGGAACATGAAGGAAGCATG 2178
Query 3227 GTTTTTATTCCAAGAATTGAAAGGGAAAGGATTTAGTGTCTCTGTCAGCACATACAGCGT 3286
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2179 GTTTTTATTCCAAGAAATGAAAGGGAAAGGATTTAGTGTCTCTGTCAGCACATATAGCGT 2238
Query 3287 TCTCATCAAAGCATTCTTCAAGAGGAAGAAATTCGTGGAGGCGAGAGAAGTTTTTGACCA 3346
|||||| |||| || || || |||||||||||| ||||||| |||||||| ||||||||
Sbjct 2239 TCTCATTAAAGGTTTTTTGAAAAGGAAGAAATTCTTGGAGGCAAGAGAAGTGTTTGACCA 2298
Query 3347 AATGAGAAGAGATGGATTAGCTGCGGATAAAGAAATTTTTGACTTTTTCAGTGATACAAA 3406
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2299 AATGAGAAGAGAAGGATTAGCTGCGGATAAAGAAATTTTTGACTTTTTCAGTGATACAAA 2358
Query 3407 ATACAAGGGCAAGAGGCCAGATACAATTGTAGATCCTATTGATGAAATAATAGAGAATTG 3466
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2359 ATACAAGGGCAAGAGGCCAGATACAATTGTAGATCCTATTGATGAAATAATAGAGAATTA 2418
Query 3467 CCTTGTAGATGAGCAACTAAGGGAAGCCAATTAG 3500
||||||||||||||||||||||| ||||||||||
Sbjct 2419 CCTTGTAGATGAGCAACTAAGGGGAGCCAATTAG 2452
> AT1G05675.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:1701116-1702749 REVERSE LENGTH=1493
Length=1493
Score = 1929 bits (1044), Expect = 0.0
Identities = 1186/1256 (94%), Gaps = 4/1256 (0%)
Strand=Plus/Plus
Query 1 AAAAGATGAAAGAAGGATCTCATGTTATCGTTTTGCCTTTCCCAGCACAAGGCCACATAA 60
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 30 AAAAGATGAGAGAAGGATCTCATGTTATTGTTTTGCCTTTCCCAGCACAAGGCCACATAA 89
Query 61 CTCCAATGTCCCAATTCTGTAAACGCTTAGCCTCAAAAGGTCTTAAGCTCACTCTTGTCC 120
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 90 CTCCAATGTCCCAATTCTGTAAACGCTTAGCCTCAAAAAGTCTTAAGATCACTCTTGTCC 149
Query 121 TCGTTTCCGACAATCCCTCTCCGCCATACAAAACAGAGCACGACTCAATCGCTGTCGTCC 180
|||| |||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||
Sbjct 150 TCGTCTCCGACAAGCCCTCTCCGCCGTACAAAACAGAGCACGACACAATCACTGTCGTCC 209
Query 181 CCATCTCCAATGGTTTCGAAGAAGGTGAGGAACGATCACAAGACCTAGATGATTACATGG 240
||||||||||||||||| ||||||| ||||||||||| ||||||||||||| |||||||
Sbjct 210 CCATCTCCAATGGTTTCCAAGAAGGCCAGGAACGATCAGAAGACCTAGATGAGTACATGG 269
Query 241 AAAGAGTGGAAGCCAGCATCAAAAACAGCTTACCGAAGCTGATAGAAGACATGAAACTGT 300
||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||| |
Sbjct 270 AAAGAGTAGAATCCAGCATCAAAAACCGCTTACCGAAGTTGATAGAAGACATGAAACTAT 329
Query 301 CGGGAAATCCTCCTAGGGCTCTCGTGTACGACTCCACCATGCCGTGGCTTCTTGATGTAG 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 330 CGGGAAATCCTCCTAGGGCTCTTGTGTACGACTCCACCATGCCGTGGCTTCTGGATGTAG 389
Query 361 CTCATACTTATGGTTTGAGCGGTGCCGTGTTTTTCACGCAGCCTTGGATTGTCTCAGCTA 420
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 390 CTCATAGTTATGGTTTGAGCGGTGCCGTGTTTTTCACGCAGCCTTGGCTTGTCTCAGCTA 449
Query 421 TTTACTATCATGTTTTCAAAGGCTCGTTCTCTGTACCGTATACAAAGTACGGTCACTCAA 480
||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||| |
Sbjct 450 TTTACTATCATGTATTCAAGGGCTCGTTCTCTGTACCGTCTACAAAGTATGGTCACTCGA 509
Query 481 CGTTAGCATCTCTCCCTTCGTTCCCGATGCTAAATGCAAATGATTTGCCGTCTTTCCTCT 540
||||||||||| |||||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct 510 CGTTAGCATCTTTCCCTTCGTTACCGATTCTGAATGCGAATGATTTGCCGTCTTTCCTCT 569
Query 541 GTGAATCGTCCTCTTACCCATATATACTAAGGACTGTGATCGATCAGCTCTCAAACATTG 600
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 570 GTGAATCTTCCTCTTACCCATATATTCTAAGGACTGTGATCGATCAGCTCTCAAACATTG 629
Query 601 ATCGAGTTGATATAGTTTTATGCAACACCTTCGATAAATTGGAAGAAAAGTTGCTGAAGT 660
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct 630 ATCGAGTTGATATAGTTTTGTGCAACACTTTCGATAAATTGGAAGAAAAGTTGCTGAAAT 689
Query 661 GGGTCCAAAGCGTGTGGCCTGTCCTGAACATAGGACCAACTGTTCCATCAATGTATTTAG 720
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 GGATTAAAAGCGTGTGGCCTGTCCTGAACATAGGACCAACTGTTCCATCAATGTATTTAG 749
Query 721 ATAAGCGACTGCCTGAAGACAAAAACTACGGATTCAGCCTTTTCGGTGCGAAAGTCGCTG 780
||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 750 ATAAGCGACTGGCTGAAGACAAAAACTACGGATTCAGCCTCTTCGGTGCGAAAATCGCTG 809
Query 781 AATGCATGGAGTGGCTAAATTTAAAGCAGCCTAGTTCAGTTGTTTATGTATCATTTGGTA 840
|||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |
Sbjct 810 AATGCATGGAGTGGCTCAACTCAAAGCAGCCTAGTTCAGTTGTTTATGTATCATTTGGGA 869
Query 841 GCTTGGTGGTTCTAAAAGAAGATCAACTGATAGAACTCGCGGCGGGTCTGAAACAGAGCG 900
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 870 GCTTGGTGGTTCTAAAAAAAGATCAACTGATAGAACTAGCGGCGGGTCTGAAACAGAGCG 929
Query 901 GCCATTTCTTTTTGTGGGTTGTGAGAG-G-CGGGGAGAAAAACAAACTTCCAGAAAACTA 958
| ||||||||||||||||||||||||| | ||| ||||| || || ||||||||||||||
Sbjct 930 GACATTTCTTTTTGTGGGTTGTGAGAGAGACGGAGAGAAGAA-AA-CTTCCAGAAAACTA 987
Query 959 TATAGAGGAAATTGGTGAGAAAGGACTGATCGTGAGCTGGAGTCCACAACTTGAAGTTCT 1018
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 988 TATAGAGGAAATTGGTGAGAAAGGACTGACCGTGAGCTGGAGTCCACAACTTGAAGTTCT 1047
Query 1019 TACACATAAATCGATCGGTTGTTTCTTGACACATTGTGGATGGAACTCGACGTTAGAGGG 1078
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1048 TACACATAAATCGATCGGTTGTTTCGTGACACATTGTGGATGGAACTCGACGTTAGAGGG 1107
Query 1079 ACTGAGTTTGGGAGTTCCAATGATTGGTATGCCACATTGGGCAGATCAGCCCACAAATGC 1138
| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1108 ATTGAGTTTGGGAGTTCCAATGATTGGTATGCCTCATTGGGCAGATCAGCCTACAAATGC 1167
Query 1139 TAAGTTCATGGAGGATGTGTGGAAAGTTGGGGTTAGGGTTAAAGCAAACGGTGATGGGTT 1198
|||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||
Sbjct 1168 TAAGTTCATGGAGGATGTGTGGAAAGTTGGAGTTAGGGTTAAAGCAGACAGTGATGGGTT 1227
Query 1199 CGTGAGAAGAGGAGAGATTGTGAGACGTGTGGGAGAAGTTATGGAGGGAGAGAAAG 1254
||||||||||| |||| ||||||||||||||| |||||||||||||| |||| |||
Sbjct 1228 CGTGAGAAGAGAAGAGTTTGTGAGACGTGTGGAAGAAGTTATGGAGGCAGAGCAAG 1283
> AT1G05680.1 | Symbols: UGT74E2 | Uridine diphosphate glycosyltransferase
74E2 | chr1:1703092-1704691 REVERSE LENGTH=1518
Length=1518
Score = 1581 bits (856), Expect = 0.0
Identities = 1126/1258 (90%), Gaps = 11/1258 (1%)
Strand=Plus/Plus
Query 2 AAAGATGAAAGAAGGATCTCATGTTATCGTTTTGCCTTTCCCAGCACAAGGCCACATAAC 61
||| |||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct 50 AAA-ATGAGAGAAGGATCTCATCTTATCGTCTTGCCTTTCCCAGGACAAGGCCACATAAC 108
Query 62 TCCAATGTCCCAATTCTGTAAACGCTTAGCCTCAAAAGGTCTTAAGCTCACTCTTGTCCT 121
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 109 TCCAATGTCCCAGTTCTGCAAACGCTTAGCCTCAAAAGGTCTTAAGCTCACTCTGGTCCT 168
Query 122 CGTTTCCGACAATCCCTCTCCGCCATACAAAACAGAGCACGACTCAATCGCTGTCGTCCC 181
||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||||
Sbjct 169 CGTCTCCGACAAACCCTCTCCTCCATACAAAACAGAGCACGACTCAATCACTGTCTTCCC 228
Query 182 CATCTCCAATGGTTTCGAAGAAGGTGAGGAACGATCACAAGACCTAGATGATTACATGGA 241
||||||||| || ||| ||||||| ||||||| || ||||||||| ||||||||||||||
Sbjct 229 CATCTCCAACGGCTTCCAAGAAGGCGAGGAACCATTACAAGACCTCGATGATTACATGGA 288
Query 242 AAGAGTGGAAGCCAGCATCAAAAACAGCTTACCGAAGCTGATAGAAGACATGAAACTGTC 301
|||||| ||| ||||||||||||||| |||||||||| || | |||||||||||||||||
Sbjct 289 AAGAGTAGAAACCAGCATCAAAAACACCTTACCGAAGTTGGTTGAAGACATGAAACTGTC 348
Query 302 GGGAAATCCTCCTAGGGCTCTCGTGTACGACTCCACCATGCCGTGGCTTCTTGATGTAGC 361
||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 349 GGGAAATCCACCTAGGGCTATCGTGTACGACTCCACCATGCCATGGCTTCTTGATGTAGC 408
Query 362 TCATACTTATGGTTTGAGCGGTGCCGTGTTTTTCACGCAGCCTTGGATTGTCTCAGCTAT 421
||||| |||||| |||||||||||||||||||||||||| |||||| ||||| |||||||
Sbjct 409 TCATAGTTATGGATTGAGCGGTGCCGTGTTTTTCACGCAACCTTGGCTTGTCACAGCTAT 468
Query 422 TTACTATCATGTTTTCAAAGGCTCGTTCTCTGTACCGTATACAAAGTACGGTCACTCAAC 481
|||||| ||||||||||| || |||||||||||||||| |||||||||||||||||| ||
Sbjct 469 TTACTACCATGTTTTCAAGGGTTCGTTCTCTGTACCGTCTACAAAGTACGGTCACTCGAC 528
Query 482 GTTAGCATCTCTCCCTTCGTTCCCGATGCTAAATGCAAATGATTTGCCGTCTTTCCTCTG 541
||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 529 ATTAGCATCTTTCCCTTCGTTCCCGATGCTGACTGCAAATGATTTGCCGTCTTTCCTCTG 588
Query 542 TGAATCGTCCTCTTACCC-ATATATACTAAGGACTGTGATCGATCAGCTCTCAAACATTG 600
||||||||||| ||||| | ||||||| |||| |||| | |||||||||||||||||||
Sbjct 589 CGAATCGTCCTCATACCCGA-ATATACTGAGGATTGTGGTGGATCAGCTCTCAAACATTG 647
Query 601 ATCGAGTTGATATAGTTTTATGCAACACCTTCGATAAATTGGAAGAAAAGTTGCTGAAGT 660
||||||| || ||||| || |||||||| |||||||||||||| ||||||||| |||| |
Sbjct 648 ATCGAGTCGACATAGTGTTGTGCAACACTTTCGATAAATTGGAGGAAAAGTTGTTGAAAT 707
Query 661 GGGTCCAAAGCGTGTGGCCTGTCCTGAACATAGGACCAACTGTTCCATCAATGTATTTAG 720
||||||||||| ||||||| ||| |||| || |||||||| |||||||| ||||||||||
Sbjct 708 GGGTCCAAAGCTTGTGGCCAGTCTTGAATATTGGACCAACGGTTCCATCGATGTATTTAG 767
Query 721 ATAAGCGACTGCCTGAAGACAAAAACTACGGATTCAGCCTTTTCGGTGCGAAAGTCGCTG 780
| || |||||| |||||||||| |||||||| || ||||| ||| ||||||||||||||
Sbjct 768 ACAAACGACTGTCTGAAGACAAGAACTACGGTTTTAGCCTCTTCAATGCGAAAGTCGCTG 827
Query 781 AATGCATGGAGTGGCTAAATTTAAAGCAGCCTAGTTCAGTTGTTTATGTATCATTTGGTA 840
||||||||||||||||||| | |||| |||||| ||| ||||| ||| ||||||| || |
Sbjct 828 AATGCATGGAGTGGCTAAACTCAAAGGAGCCTAATTCTGTTGTCTATTTATCATTCGGAA 887
Query 841 GCTTGGTGGTTCTAAAAGAAGATCAACTGATAGAACTCGCGGCGGGTCTGAAACAGAGCG 900
| |||||| ||||||||||||||||| || | |||||||| |||||||||||||||||||
Sbjct 888 GTTTGGTGATTCTAAAAGAAGATCAAATGTTGGAACTCGCTGCGGGTCTGAAACAGAGCG 947
Query 901 GCCATTTCTTTTTGTGGGTTGTGAGAG-G-CGGGGAGAAAAACAAACTTCCA-GAAAACT 957
| | ||||||| ||||||||||||||| | | | ||| | ||||||||||| |||| ||
Sbjct 948 GACGTTTCTTTCTGTGGGTTGTGAGAGAGACAG--AGACACACAAACTTCCAAGAAA-CT 1004
Query 958 ATATAGAGGAAATTGGTGAGAAAGGACTGATCGTGAGCTGGAGTCCACAACTTGAAGTTC 1017
|| | |||||||| ||||| |||||||| || || ||||||||||| || ||||| || |
Sbjct 1005 ATGTCGAGGAAATCGGTGAAAAAGGACTTATTGTAAGCTGGAGTCCTCAGCTTGACGTAC 1064
Query 1018 TTACACATAAATCGATCGGTTGTTTCTTGACACATTGTGGATGGAACTCGACGTTAGAGG 1077
|| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1065 TTGCACATAAATCAATCGGTTGTTTCTTGACACACTGTGGATGGAACTCGACGTTAGAGG 1124
Query 1078 GACTGAGTTTGGGAGTTCCAATGATTGGTATGCCACATTGGGCAGATCAGCCCACAAATG 1137
|| |||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||
Sbjct 1125 GATTGAGTTTGGGAGTTCCAATGATTGGTATGCCACACTGGACTGATCAGCCCACGAATG 1184
Query 1138 CTAAGTTCATGGAGGATGTGTGGAAAGTTGGGGTTAGGGTTAAAGCA-AACGGTGATGGG 1196
||||||||||| ||||||||||||| |||||||| |||||||| ||| || |||||||||
Sbjct 1185 CTAAGTTCATGCAGGATGTGTGGAAGGTTGGGGTAAGGGTTAAGGCAGAA-GGTGATGGG 1243
Query 1197 TTCGTGAGAAGAGGAGAGATTGTGAGACGTGTGGGAGAAGTTATGGAGGGAGAGAAAG 1254
|| |||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||
Sbjct 1244 TTTGTGAGAAGAGAAGAGATTATGAGAAGTGTGGAAGAAGTTATGGAGGGAGAGAAAG 1301
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174229793039
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5