BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470601
Length=2143
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | ... 2861 0.0
AT1G63760.1 | Symbols: ARI6, ATARI6 | pseudogene, ARI protein, ... 2311 0.0
AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing pro... 1583 0.0
AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily pr... 302 1e-80
AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily ... 191 3e-47
> AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein
| chr1:1779256-1784427 FORWARD LENGTH=2421
Length=2421
Score = 2861 bits (1549), Expect = 0.0
Identities = 1695/1766 (96%), Gaps = 7/1766 (0%)
Strand=Plus/Plus
Query 336 AATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGA 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGA 720
Query 396 GTTTCCGTGGTCCTCTCCATAACTGATGTCGAAGCAAGCATTTTGCTTCTCCACTATCAC 455
||||||| ||||||||||||||| |||||||||||||| | ||||||||| |||||||||
Sbjct 721 GTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCAC 780
Query 456 TGGGA-TGTTAGTAAAGTTCATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGGAGAAC 514
| ||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 781 T-GGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAAC 839
Query 515 TGTTGGCATATTAGAGGGACCTGTTGTTCCAACACCTGATGGCAGAGAACTTACATGTGG 574
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 840 TGTTGGCATATTAGAGGGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGG 899
Query 575 AATATGCTTTGAATCCTACCCTCTTGAGGATATTGTATCGGCTTCTTGTGGTCATCCTTT 634
|||||||||||| |||||| |||||||||| |||||||||| ||||||||||||||||||
Sbjct 900 AATATGCTTTGATTCCTACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTT 959
Query 635 CTGCACTACATGTTGGACGGGTTATATAAGCACAACCATCAATGATGGCCCAGGATGTTT 694
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 960 CTGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTT 1019
Query 695 GATGCTAAAATGTCCTGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAA 754
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAA 1079
Query 755 ATTGGCTTGTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTTGA 814
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1080 GTTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGA 1139
Query 815 AGACAACAGAAAGATGAAGTGGTGTCCTGCCCCAGGATGTGAGCATGCAATTGATTTTGC 874
|| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1140 AGTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGC 1199
Query 875 TGCTGGGACTGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTG 934
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 TGGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTG 1259
Query 935 CACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGGAAATGGATACTAAAGAA 994
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1260 CACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAA 1319
Query 995 CAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAGGTG 1054
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1320 CAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTG 1379
Query 1055 TAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAA 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 TAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAA 1439
Query 1115 ACATGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGG 1174
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 ATTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGG 1499
Query 1175 ATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGAAAGAAGGGTTGTATGATGAGGCTGA 1234
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1500 ATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGA 1559
Query 1235 AAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTG 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 AAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTG 1619
Query 1295 GGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGA 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 GGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGA 1679
Query 1355 GAAGCTTGGGAAGCTTAGTGACATACAGTGCACACCAGAATCTCAGCTCAAGTTTATCGC 1414
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1680 GAAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGC 1739
Query 1415 ACAAGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTTAAATGGACATATGCATATGG 1474
| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1740 AGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGG 1799
Query 1475 ATACTATCTACCAGATCATGCTAAGCGACAATTTTTTGAGTATTTGCAAGGGGAGGCTGA 1534
||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1800 ATACTATCTACAAGATCATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGA 1859
Query 1535 GTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATTTAGAGGTGTTTCAAATTGC 1594
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 1860 GTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGC 1919
Query 1595 TGACGGCCCTTCAGATGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCAT 1654
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 TGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCAT 1979
Query 1655 AACAAAAACCTACTTCGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGA 1714
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 AACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGA 2039
Query 1715 TAT-ACAAGCTGCTAGCAGCAAACCAGCAAACTCTAAATCGTCTAGCAAGACAAAAGGCG 1773
| | |||||||||||||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct 2040 T-TCACAAGCTGCTAGCAGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCG 2098
Query 1774 GTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGACAATT 1833
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2099 GTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATT 2158
Query 1834 GAGATCTCTCAGGTTTCAGTTGCATCACTCAGTCTCTCCCACAAAGGTCGAGATTACTCG 1893
||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||
Sbjct 2159 GAGATCTCTCAGGTTTCAGTTACATCACTCAGTCTCTCTCACAAAGGTCTAGATTACTCA 2218
Query 1894 GGAAGAAGAAGAAAGAATTTTTAAGAGTTCAGCAAATTGGAGGAAGGTTTGGGGTTTACA 1953
|||||||||| | || ||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 2219 GGAAGAAGAA-A--GACTTTTTAAGAGTTCAGCAAATTGGAGAAAGGTTTGGGGTTTAGA 2275
Query 1954 ATACTTTTGAGTACACTCCTGTGAGTTTGAAGGCTGTTAAGGCACAAGACTGCACGCACA 2013
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2276 ATACTTTTGACTACACTCCTGTGAGTTTGAAGGCTGTTAAGGCACAAGACTGCACACACA 2335
Query 2014 AGTGAACTATCTCTCTCTGTCTTAAGGTTTCATGTTAGTCTTTGGTTACCCTAAATATTG 2073
||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||
Sbjct 2336 AGTTAACTATCTCTCTCTGTCTTAAGGGTTCATGATAGTCTTTGCTTACCCTAAATATTG 2395
Query 2074 TATAGTATAAAAGAATCTGCACATTG 2099
|||||||| |||||||||||||||||
Sbjct 2396 TATAGTATTAAAGAATCTGCACATTG 2421
Score = 261 bits (141), Expect = 2e-68
Identities = 218/252 (87%), Gaps = 17/252 (7%)
Strand=Plus/Plus
Query 79 CCCCCAAACCCTACTTTGTCCAGCGAGAAAAGAAGAGGGCTTTCGTCTGATTCCGCTAAA 138
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 293 CCCCCAAACCCTACTTTGTCCAGCGAGAAAGGAAGAGGGGTTTCGTCTGATTCCGCTAAA 352
Query 139 TCTCTAGTCTTTATTTAAAGATCATGGATTCCGATGATGATATGCTCGATGCCCACGATA 198
|||||||||||||| |||||||||||||||||||||||||||||| | | ||||
Sbjct 353 TCTCTAGTCTTTATCTAAAGATCATGGATTCCGATGATGATATGC---A--C----GATA 403
Query 199 TGGAATACGG-AGATGATGATTTTTACAGCGGCGGCACCGACGATTACGACGATAGTGAT 257
|||| | ||| |||| |||||| |||||||||||||||| | ||| || |||||||||||
Sbjct 404 TGGACT-CGGTAGATTATGATTATTACAGCGGCGGCACCTATGATGACAACGATAGTGAT 462
Query 258 GATGTTGAAACTGATTACGGGTTTGGTGAGGCAGACGCCGATGATTCCGCCATTATCGCC 317
|| || |||||| ||||||||||||||| ||| |||| ||| ||||||| ||||||
Sbjct 463 GA-----AA-CTGATTTCGGGTTTGGTGAGGCTGACACCGACGATGCCGCCATCATCGCC 516
Query 318 TCCCATCGCTCT 329
||| ||||||||
Sbjct 517 TCCTATCGCTCT 528
> AT1G63760.1 | Symbols: ARI6, ATARI6 | pseudogene, ARI protein,
similar to ARI protein (A Drosophila RING Finger Motif Involved
in Axonal Path-finding in the Central Nervous System)
GB:CAA66953 (Drosophila melanogaster); blastp match of 86% identity
and 5.3e-235 P-value to GP|6850317|gb|AAF29394.1|AC009999_14|AC009999
Contains similarity to Ariadne-2 protein from
Drosophila melanogaster gb|AJ010169 and contains an IBR
PF|01485 and a zf-C3HC4 (RING finger) PF|00097 domain. ESTs
gb|AA585849, gb|T42014 come from this gene. -TRUNCATED- | chr1:23655713-23657612
FORWARD LENGTH=1900
Length=1900
Score = 2311 bits (1251), Expect = 0.0
Identities = 1553/1694 (92%), Gaps = 39/1694 (2%)
Strand=Plus/Plus
Query 162 ATGGATTCCGATGATGATATGCTCGATGCCCACGATATGGAATACGG-AGATGATGATTT 220
||||||||||||||||||||||||||||||||||||||||| | ||| |||| |||||||
Sbjct 4 ATGGATTCCGATGATGATATGCTCGATGCCCACGATATGGACT-CGGTAGATTATGATTT 62
Query 221 TTACAGCGGCGGCACCGACGATTACGACGATAGTGATGATGTTGAAACTGATTACGGGTT 280
| |||||||||||||||| ||| || |||||| | ||| |||||||||||||| |||
Sbjct 63 TGACAGCGGCGGCACCGATGATGACAACGATA-T--TGA---TGAAACTGATTACGTGTT 116
Query 281 TGGTGAGGCAGACGCCGATGATTCCGCCATTATCGCCTCCCATCGCTCTCAGATAAATTA 340
||||||||| ||| | || ||| ||||||| ||||||| |||||||||||||||||||||
Sbjct 117 TGGTGAGGCTGACACGGACGATGCCGCCATCATCGCCTACCATCGCTCTCAGATAAATTA 176
Query 341 TGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTC 400
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 177 TGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAAGGATGACGTTGGGCGAGTTTC 236
Query 401 CGTGGTCCTCTCCATAACTGATGTCGAAGCAAG-CATTTTGCTTCTCCACTATCACTGGG 459
||| |||||||||||||| |||||| ||||||| | |||||||||| |||||||||| ||
Sbjct 237 CGTTGTCCTCTCCATAACCGATGTCCAAGCAAGTC-TTTTGCTTCTTCACTATCACT-GG 294
Query 460 A-TGTTAGTAAAGTTCATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGGAGAACTGTT 518
| ||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 295 AGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGACAGAGTTCGTAGAACTGTT 354
Query 519 GGCATATTAGAGGGACCTGTTGTTCCAACACCTGATGGCAGAGAACTTACATGTGGAATA 578
||||||||||||||||| || |||||||||||||||| ||||||||||||||
Sbjct 355 GGCATATTAGAGGGACC---TG------CACCTGATGGCAGAGAGTTTACATGTGGAATA 405
Query 579 TGCTTTGAATCCTACCCTCTTGAGGATATTGTATCGGCTTCTTGTGGTCATCCTTTCTGC 638
|||||||||||||||||||||||||| | | |||||| |||||||||||| || ||||||
Sbjct 406 TGCTTTGAATCCTACCCTCTTGAGGAAACTATATCGGTTTCTTGTGGTCACCCATTCTGC 465
Query 639 ACTACATGTTGGACGGGTTATATAAGCACAACCATCAATGATGGCCCAGGATGTTTGATG 698
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 466 GCTACATGTTGGACGGGTTATATAAGCACAAGCATCAATGATGGCCCAGGATGTTTGATG 525
Query 699 CTAAAATGT-CCTGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAATT 757
||||||||| ||| |||||| ||||||||| || ||||||||||||||||||||||| ||
Sbjct 526 CTAAAATGTCCCT-ACCCTTGTTGTCCTGCGGCCATTGGTCGAGATATGATCGATAACTT 584
Query 758 G-GCTTGTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTTGAAG 816
| | || |||||||||||| ||| ||||||||||||||||||||| |||||||||||||
Sbjct 585 GTG-TTCCAAGGAAGACAAGTAGAGGTATTATAGATATTTTCTTAGGTCTTATGTTGAAG 643
Query 817 ACAACAGAAAGATGAAGTGGTGTCCTGCCCCAGGATGTGAGCATGCAATTGA-TTTTGCT 875
||||||| |||||||||| |||||||||||||||||||||||||||||| | |||||||
Sbjct 644 TCAACAGAGAGATGAAGTGCTGTCCTGCCCCAGGATGTGAGCATGCAATT-AGTTTTGCT 702
Query 876 GCTGGGACTGAAAG---TTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAAT 932
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 GCTGGGACCGAAAGTAATTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAAT 762
Query 933 TGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGGAAATGGATACTAAAG 992
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 763 TGCAGTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAG 822
Query 993 AACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAGG 1052
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 823 AACAGCACTGAATCTGAAAATATGAATTGGATACTTGCCAATTCGAAGCCTTGTCCAAAG 882
Query 1053 TGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGT 1112
|||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 883 TGTAAGAGGCCAATAGAAAAGAATCATGGATGTATGCACATGACATGCACACCACCTTGT 942
Query 1113 AAACATGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGT 1172
|| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct 943 AAGTTTGAGTTTTGTTGGCTCTGCCTTAACGCATGGACAGAACACGGGGAAAGTAGTGGT 1002
Query 1173 GGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGAAAGAAGGGTTGTATGATGAGGCT 1232
|| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1003 GGGTATTATGCCTGCAACCGGTATGAGGCGGCTAAGAAACAAGGGTTGTATGATGAGGCT 1062
Query 1233 GAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGC 1292
|||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||
Sbjct 1063 GAAAGGAGGCGAGAGATGGCAAAAAACTCGCTAGAGAAATACACTCATTACTATAAACGA 1122
Query 1293 TGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCA 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 TGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCA 1182
Query 1353 GAGAAGCTTGGGAAGCTTAGTGACATACAGTGCACACCAGAATCTCAGCTCAAGTTTATC 1412
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1183 GAGAAGCTTAGGAAGCTTAGTGACATACAGTGCACATCAGAATCTCAGCTCAAGTTTATC 1242
Query 1413 GCACAAGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTTAAATGGACATATGCATAT 1472
||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1243 GCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTCAAATGGACATATGCATAT 1302
Query 1473 GGATACTATCTACCAGAT---CATGCTAAGCGACAATTTTTTGAGTATTTGCAAGGGGAG 1529
||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 1303 GGATACTATGTACCAGATGATCATACTAAGAAACAATTTTTTGAGTATTTGCAAGGGGAG 1362
Query 1530 GCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGAT-TTAGAGGTGTTTCA 1588
||||||||||||||||||||||||||| ||||| ||||||| ||| || ||||||||| |
Sbjct 1363 GCTGAGTCAGGTTTGGAGAGGCTCCACGAATGCATAGAGAATGATATT-GAGGTGTTTGA 1421
Query 1589 AATTGCTGACGGCCCTTCAGATGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAAC 1648
| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1422 ATTTGGTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGATTTAAC 1481
Query 1649 CAGCATAACAAAAACCTACTTCGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGA 1708
||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1482 CAGCATAACAAAAACCTTCTTCCAAAATCTGGTCAAAGCTCTGGAGAATGGTCTTGCTGA 1541
Query 1709 TGTGGATAT-ACAAGCTGCTAGCAGCAAACCAGCAAACTCTAAATCGTCTAGCAAGACAA 1767
|||||| | ||| ||||||||||||||||||||||||| |||| | |||||||| ||||
Sbjct 1542 CGTGGAT-TCACATGCTGCTAGCAGCAAACCAGCAAACTGTAAACCTTCTAGCAATACAA 1600
Query 1768 AAGGCGGTGGGAAAGGTAAA--GGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGA 1825
||| |||||||||||||||| |||||||| || ||||||||| ||||||||||| |||
Sbjct 1601 AAGACGGTGGGAAAGGTAAAAAGGAAGCTCTAACGATGGCGGGTTCAGCAGAAACCTAGA 1660
Query 1826 TGACAATTGAGATC 1839
|| |||||||||||
Sbjct 1661 TGGCAATTGAGATC 1674
> AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing protein
| chr2:13416646-13421170 REVERSE LENGTH=2034
Length=2034
Score = 1583 bits (857), Expect = 0.0
Identities = 1431/1704 (84%), Gaps = 56/1704 (3%)
Strand=Plus/Plus
Query 162 ATGGATTCCGATGATGATATGCTCGATGCCCACGATATGGAATAC-GGAGATGATGATTT 220
|||||||| || || || ||||||||||| ||||||||||| | | ||||| ||||||||
Sbjct 1 ATGGATTCTGAAGAAGACATGCTCGATGCGCACGATATGGAGT-CTGGAGAGGATGATTT 59
Query 221 TTACAGCGGCGGCACCGACGATTACGACGATAGTGATGATGTTGAAACTGATTACGGGTT 280
|||||||| || || || |||| | ||||||||||||| |||| ||||||| |||||
Sbjct 60 CTACAGCGGTGGAACTGATGATTGTAATGATAGTGATGATGGTGAACCTGATTATGGGTT 119
Query 281 TGGTGAGGCAGACGCCGATGATTCCGCCATTATCGCCTCCCATCGCTCTCAGATAAA-TT 339
|| ||||| ||| || |||||||| || || |||||||| ||||||||||||| ||| ||
Sbjct 120 TGTTGAGGAAGATGCTGATGATTCTGCTATGATCGCCTCTCATCGCTCTCAGAAAAACTT 179
Query 340 ATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTT 399
|| |||||| | |||||||||||||||||||||||||| ||| || ||| |||||||
Sbjct 180 TTG-TGTTCTGAGGGAAGAAGATATTCGCAGGCATCAGATGGATAATATTGAACGAGTTT 238
Query 400 CCGTGGTCCTCTCCATAACTGATGTCGAAGCAAGCATTTTGCTTC-TCCACTATCACTGG 458
|||| || ||||| |||||||| || ||||| || ||| | |||| | |||| ||||| |
Sbjct 239 CCGTTGTTCTCTCGATAACTGAGGTTGAAGCGAGTATTCTACTTCGT-CACTTTCACT-G 296
Query 459 GA-TGTTAGTAAAGTTCATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGG-AGAACTG 516
|| ||| ||| |||||||||||| |||||||| ||||| |||||||||||| || ||||
Sbjct 297 GAGTGTCGGTAGAGTTCATGATGAGTGGTTTGCTGATGAAGAGAGAGTTCGGAAG-ACTG 355
Query 517 TTGGCATATTAGAGGGACCTGTTGTTCCAACACCTGATGGCAGAGAACTTACATGTGGAA 576
|||||||||| ||| | | |||||||||| || |||||| ||| ||||||||||||||||
Sbjct 356 TTGGCATATTGGAGAGTCATGTTGTTCCACCATCTGATGACAGTGAACTTACATGTGGAA 415
Query 577 TATGCTTT-GAATCCTACCCTCTTGAGGATATTG-TATCGGCTTCTTGTGGTCATCCTTT 634
| || ||| || |||||||||| |||| | || | | || | ||||||||| ||||||||
Sbjct 416 TCTG-TTTCGATTCCTACCCTCCTGAGAAAATCGCT-TCAGTTTCTTGTGGCCATCCTTT 473
Query 635 CTGCACTACATGTTGGACGGGTTATATAAGCACAACCATCAATGATGGCCCAGGATGTTT 694
|||||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||
Sbjct 474 CTGCACTACATGCTGGACAGGTTATATCAGCACAACCATTAATGATGGCCCGGGATGTTT 533
Query 695 GATGCTAAAATGTCCTGACCCTTCTTGTCCTGCTGCTATTGGTCGA-GATATGATCGATA 753
|||||||| |||||||||||| ||||||| ||||||| |||||| | |||||| | || |
Sbjct 534 GATGCTAAGATGTCCTGACCCATCTTGTCTTGCTGCTGTTGGTC-ATGATATGGTTGACA 592
Query 754 AATTGGC-T-TGTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGT 811
|||| || | || || || || ||||||||||| | |||||||||||||| |||||| |
Sbjct 593 AATTAGCGTCTG-AA-GACGAAAAGGAGAAGTACAACAGATATTTTCTTAGGTCTTATAT 650
Query 812 TGAAGACAACAGAAAGATGAAGTGGTGTCCTGCCCCAGGATGTGAGCATGCAATTGATTT 871
|||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||
Sbjct 651 TGAAGACAACAGAAAGATGAAGTGGTGTCCTGCCCCGGGATGTGATTTTGCGATTGATTT 710
Query 872 TGCTGCTGGGACT-GAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGA 930
|| ||| ||| || |||| |||||||||||| |||||||| ||| ||||||||||||||
Sbjct 711 TGTTGCAGGGTCTGGAAA-TTATGATGTTTCCTGCTTGTGCTCGTTTAGCTTTTGCTGGA 769
Query 931 ATTGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGA-CACAGTTGGGAAATGGATACTA 989
|||||||||| ||||||||||| |||||||||||| | ||||||| ||||||||| ||
Sbjct 770 ATTGCACTGAGGAGGCTCACCGACCTGTGGATTGT-AGCACAGTTTCAAAATGGATATTA 828
Query 990 AAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCA 1049
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 AAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCG 888
Query 1050 AGGTGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCT 1109
|| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 889 AGATGTAAGAGGCCAATTGAAAAGAATCAGGGCTGTATGCACATGACATGTACACCGCCT 948
Query 1110 TGTAAACATGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACT 1169
|||||| |||| ||||||||||| || ||| ||||||| || |||||||||||||||
Sbjct 949 TGTAAATATGAATTTTGTTGGCTATGTCTTGGTGCATGGATGGATCACGGGGAAAGAACT 1008
Query 1170 GGTGGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGAAAGAAGGGTTGTATGATGAG 1229
||||| |||||||| || ||||| ||||||| ||| ||| ||||||| ||||||||||
Sbjct 1009 GGTGGTTTTTATGCTTGTAACCGTTATGAGGTGGCCAAGCAAGAAGGACAGTATGATGAG 1068
Query 1230 GCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAA 1289
| || |||||| |||||||||| ||||||||||||||||||||||| || || ||||||
Sbjct 1069 ACAGAGAGGAGGAGAGAGATGGCCAAAAATTCGCTAGAGAGATACACACACTATTATGAA 1128
Query 1290 CGCTGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCA- 1348
|||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||
Sbjct 1129 CGCTGGGCAAGCAATCAAACGTCGAGGCAAAAGGCTATGGCTGATCTGCAGCAAGCGCAG 1188
Query 1349 AT-CAGAGAAGCTTGGGAAGCTTAGTGACATACAGTGCACACCAGAATCTCAGCTCAAGT 1407
|| |||| | |||| |||||||||||| | ||||||||||||||| ||||||||||| |
Sbjct 1189 ATGCAGA-AT-CTTGAGAAGCTTAGTGATAAACAGTGCACACCAGAGTCTCAGCTCAAAT 1246
Query 1408 TTATCGCACAAGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTT-AAATGGACATAT 1466
| || | |||||||||| |||||||| ||||| || || || ||| |||||||| |||
Sbjct 1247 TCATTTTAGAAGCTTGGCTTCAGATCATCGAATGTAGGCGAGT-CTTGAAATGGACTTAT 1305
Query 1467 GCATATGGATACTATCTACC--AG-AT---CATGCTAAGCGACAATTTTTTGAGTATTTG 1520
|||||||||||||| ||||| || || ||||| || ||||||||||| |||||||||
Sbjct 1306 GCATATGGATACTACCTACCTGAGCATGAACATGCCAAACGACAATTTTTCGAGTATTTG 1365
Query 1521 CAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCA-CAAATGCGTAGAGAAGGATTTAGA 1579
||||| || |||||||||||||| ||||||||||| ||| ||||||||||| || || |
Sbjct 1366 CAAGGTGAAGCTGAGTCAGGTTTAGAGAGGCTCCATCAA-TGCGTAGAGAAAGACTT-G- 1422
Query 1580 GGT--GTTTCAAATTGCTGACGGCCCTTCAGATGAATTCAATCATTTCCGGACAAAATTA 1637
| | ||||| ||||| || || || ||| | || |||||| |||||||||||||| ||
Sbjct 1423 GTTCAGTTTCTCATTGCGGAAGGTCCATCAAAAGATTTCAATGATTTCCGGACAAAACTA 1482
Query 1638 ACTGGTTTAACCAGCATAAC-AAAAACCTACTTCGAAAATCTGGTGAAAGCTCTGGAGAA 1696
||||||| |||||| | || |||||| ||||| || ||| |||||||||||||||||||
Sbjct 1483 GCTGGTTTGACCAGCGTGACGAAAAAC-TACTTTGAGAATTTGGTGAAAGCTCTGGAGAA 1541
Query 1697 TGGTCTTGCTGATGTGGA-TATACAAGCTGCT---AGCAGCAAACCAGCAAACTCTAAAT 1752
|||||||||||||| || | ||| || ||| ||||||||| || ||| ||||||||
Sbjct 1542 CGGTCTTGCTGATGTAGACTC-ACATGCGGCTTGCAGCAGCAAATCAACAAGCTCTAAAT 1600
Query 1753 CGTC---TAGCA--AGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGG 1807
| | | ||| || ||||| | || ||||| |||||||| |||| || ||| ||
Sbjct 1601 CAACAGGTTGCAGTAG-CAAAACAAGA-GGTAAAGGCAAAGGAAGTTCCAGAACTGGTGG 1658
Query 1808 GTCCAGCAGAAACCCAGATGACAA 1831
|||||||||||||||||||||||
Sbjct 1659 ATCCAGCAGAAACCCAGATGACAA 1682
> AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily
protein | chr2:13511579-13513550 FORWARD LENGTH=1632
Length=1632
Score = 302 bits (163), Expect = 1e-80
Identities = 368/462 (80%), Gaps = 33/462 (7%)
Strand=Plus/Plus
Query 1269 AGATACACTCATTACTATG-AACGCTGGGCAAG-CAATCAAGT-GTCGAGGCAAAAAGCT 1325
|||||||| ||||| |||| || | ||||| || |||||| | |||||||| ||| |||
Sbjct 1045 AGATACACGCATTATTATGTAA-GATGGGC-AGAAAATCAA-TCGTCGAGGCTAAAGGCT 1101
Query 1326 ATGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTT-GGGAAGCTTAGTGAC-ATACAGT 1383
||| | |||||| |||| ||||||| | | ||||| || ||||||||||| || ||||
Sbjct 1102 ATGAGAGATCTGGAGAAGTTGCAATCGGTGCAGCTTAAGG-AGCTTAGTGACAAT-CAGT 1159
Query 1384 GCACACCAGAATCTCAGC-TCAAGTTTATCGCACAAGCTTGGCTCCAGATCATTGAATGC 1442
|||| | ||| |||||| |||| || | || | | || ||||| |||||||| |||||
Sbjct 1160 GCACGTCTGAAACTCAGCTTCAA-TTCACCGTAGATGCATGGCTTCAGATCATCGAATGT 1218
Query 1443 A-GACGGGTACTT-AAATGGACATATGCATATGGATACTATCTACCAGATCAT-GCTAAG 1499
| || | || ||| |||||||||||||||||||||||||| || | ||||| | | |||
Sbjct 1219 AGGA-GAGT-CTTGAAATGGACATATGCATATGGATACTACCTTCAAGATC-TCCCCAAG 1275
Query 1500 C-GACAATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCA-CA 1557
| || ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||
Sbjct 1276 CGGA-AATTTTTTGAGTATTTGCAAGGGGAGGCTGAATCAGGTTTGGAGAGGCTTCATCA 1334
Query 1558 AATGCGTAGAGAAGGATTT-AGAGG-TGTTTCA--AATTGCTGACGGCCCTTCAGATGAA 1613
|| | |||||| || || | | | ||||| || | ||| | || || ||| |
Sbjct 1335 T-TGTGCAGAGAATGAGTTGAAACAATTTTTCATTAAAAG-TGAAGATCCATCCGAT-AC 1391
Query 1614 TT-CAAT-CATTTCCGGACAAAATTAACTGGTTTAACCAGCA-TAACAAAAACCTACTTC 1670
|| |||| | |||||||| |||||||||||||| || | || |||| ||||||||||||
Sbjct 1392 TTTCAATGC-TTTCCGGATGAAATTAACTGGTTTGACTA-CAGTAACCAAAACCTACTTC 1449
Query 1671 GAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTG 1712
|||||||||||||||||| ||||||||||||| | |||||||
Sbjct 1450 GAAAATCTGGTGAAAGCTTTGGAGAATGGTCTGGTTGATGTG 1491
> AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily
protein | chr2:13515199-13517413 FORWARD LENGTH=1603
Length=1603
Score = 191 bits (103), Expect = 3e-47
Identities = 384/514 (75%), Gaps = 41/514 (8%)
Strand=Plus/Plus
Query 1225 ATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACT 1284
|||||| ||||| | | || | | ||| ||| || || | || |||||||| |||| |
Sbjct 1034 ATGAGGATGAAACTAAGAGAAAAAGGGCTAAAGATGCGATCGATAGATACACGCATTTTT 1093
Query 1285 ATGAACGCTGGGCAAGCAATCAAGT-GTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAA 1343
||||| | |||||| ||||||| | ||||||| ||||||||| | ||| || || ||
Sbjct 1094 ATGAAAGATGGGCATTCAATCAA-TCCTCGAGGCTTAAAGCTATGAGTGATTTGGAG-AA 1151
Query 1344 AT-GCAATCAGAGAAGCTTGGGAAGCTTAGTGACATACAGTGCACACCAGAATCTCAGCT 1402
|| |||||| | | ||||| | ||||||||||||| ||| ||||||||||| |||||||
Sbjct 1152 ATGGCAATCGGTGGAGCTTAAGCAGCTTAGTGACATTCAGAGCACACCAGAAACTCAGCT 1211
Query 1403 CAAGTTT-ATCGCACAAGCTTGGCTCCAGATCATTGAATGCA-GACGGGTACTT-AAATG 1459
| ||||| | || | | || ||||| |||||||| || || | || |||| ||| |||||
Sbjct 1212 C-AGTTTCACCGTAGATGCATGGCTTCAGATCATCGAGTGTAGGA-GGGT-CTTGAAATG 1268
Query 1460 GACATATGCATATGGATACTATC-TAC-CAGATCATGCTAAGCGACAATTTTTTGAGTAT 1517
||| ||||||||||||||||| | ||| || ||| | |||| ||| ||||||
Sbjct 1269 GACCTATGCATATGGATACTA-CATACTTAG-TCAAG---AGCG-CAA-CAAGCGAGTAT 1321
Query 1518 TTGCAAGGGGAGGCTGAGTCA-GGTTTGGAGAGGCTCCA-CAAATGCGTAGAGAAGGA-T 1574
||||||| ||||| || | ||||||||||| || || | | || | |||| |||| |
Sbjct 1322 TTGCAAGCTGAGGCAGA-AAATGGTTTGGAGAGACTTCATC-ATTGTGCAGAGGAGGAGT 1379
Query 1575 TTAGA-GGTGTT-TC---AAATTGCTGACGGCCCTTCAGATGAA-TTCAATCATTTCCGG 1628
| | | || || || ||| | ||| | ||| ||| | || ||| | | ||| |
Sbjct 1380 TGAAACAGT-TTATCGGGAAAAT--TGAAGACCCATCA-AAAAATTTCGGTGAGCTCC-G 1434
Query 1629 A-CAAAATTAACTGGTTTAAC--CAGCATAACAAAAACCTACTTCGAAAATCTGGTGAAA 1685
| | ||||||| || ||| || ||| ||| |||||||||||||||||||||||||||
Sbjct 1435 AGCGAAATTAATTGATTTGACTAAAGC--AACTAAAACCTACTTCGAAAATCTGGTGAAA 1492
Query 1686 GCTCTGGAGAATGGTCTTGCTGATGTGG-ATATA 1718
||| ||||||| ||||||| ||| |||| |||||
Sbjct 1493 GCTTTGGAGAACGGTCTTGTTGACGTGGCATATA 1526
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106274553765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5