BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470621
Length=941
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06090.1 | Symbols: | Fatty acid desaturase family protein ... 1393 0.0
AT1G06120.1 | Symbols: | Fatty acid desaturase family protein ... 1314 0.0
AT1G06100.1 | Symbols: | Fatty acid desaturase family protein ... 1024 0.0
AT1G06360.1 | Symbols: | Fatty acid desaturase family protein ... 627 8e-179
AT1G06350.1 | Symbols: | Fatty acid desaturase family protein ... 593 8e-169
> AT1G06090.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1847883-1849693 FORWARD LENGTH=1131
Length=1131
Score = 1393 bits (754), Expect = 0.0
Identities = 883/945 (93%), Gaps = 9/945 (1%)
Strand=Plus/Plus
Query 1 ATACCTCAAAAATAACAAACCCATTTCCTCGACGGTCCAATGGGGGACACTACTAAGGAC 60
||| |||||||||||||| |||| |||||||||||||||||||||||||| || ||||||
Sbjct 1 ATATCTCAAAAATAACAATCCCA-TTCCTCGACGGTCCAATGGGGGACACCACAAAGGAC 59
Query 61 GATGGCTCTAGCCAAAGCAAAGCGGTACGTAGGGG-AAAAAGAGCGTTCTTTTTCAGGAA 119
||||| ||||||||||| |||||||| ||| |||| ||||||||| ||||||||||||||
Sbjct 60 GATGGGTCTAGCCAAAGTAAAGCGGTGCGT-GGGGAAAAAAGAGCATTCTTTTTCAGGAA 118
Query 120 ATGGACCCGGATCGATGTAATGAGAGCTTCGGCTGTTGGGTCTGTGCATCTATTGTGTCT 179
|||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct 119 ATGGACCCGGATCGATATAGCGAGAGCTTCGGCTGTTGGGGCTGTGCATCTATTGTGTCT 178
Query 180 ATTGGCACCGTTTAACT-TCAAATGGGAAGCTTTTCGGTTTGGTGTGATTCTCGCTATAG 238
||||| |||||||||| | |||||||||||| | ||||| |||||||||||||||||||
Sbjct 179 GTTGGCTCCGTTTAACTAT-AAATGGGAAGCTCTCCGGTTCGGTGTGATTCTCGCTATAG 237
Query 239 TGACTAGTCTCAGCATTACATTTTCATACCATAGGAACTTGACTCACCGGAGCTTTAAGC 298
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 238 TGACTAGTCTTAGCATTACATTTTCATACCATAGGAACTTGACTCACAAGAGCTTTAAGC 297
Query 299 TCCCTAAATGGCTTGAATATCTATTCGCTTACACTGCCCTTTTCGCGCTTCAGGGTCATC 358
| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 298 TTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTTCGCGCTTCAGGGTCATC 357
Query 359 CGATAGATTGGGTGAGCACGCATAGGTTCCATCACCAGTTCACAGATTCAGACCGTGACC 418
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 358 CAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCACAGATTCAGACCGTGACC 417
Query 419 CACATAGTCCTATAGAAGGATTTTGGTTCAGTCACGTCTTGTGGATATTCGACACCAGTT 478
||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 418 CACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTCTTTTGGATATTCGACACCAGTT 477
Query 479 ATATCAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGACTTGAAGAAACAATGGTTCT 538
| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 478 ACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGATGGACTTGAAGCAACAATGGTTCT 537
Query 539 ATAGGTTTCTTCGAAACACAATTGGCCTCCACATCTTATCATTTTGGACTCTCGTCTATT 598
||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct 538 ATAGGTTTCTTCGAAACACAATTGGTCTCCACATCTTAACATTTTGGACCCTCGTCTATT 597
Query 599 TATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGGGTGTGGGAGGAGCAATCGGTTACA 658
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 598 TATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGGGTGTTGGAGGAACAATCGGTTACA 657
Query 659 ACGGGACTTGGCTCATAAACTCAGCATGCCATATTTGGGGCACGCAAGCATGGAATACCA 718
| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||| || |
Sbjct 658 ATGGGACTTGGCTCATAAACTCGGCATGCCATATTTGGGGTTCGCGAGCATGGAACACTA 717
Query 719 AGGACACTTCTCGTAACGTTTGGTGGCTAGGGCCATTCACGATGGGAGAGAGCTGGCACA 778
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 AGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTCACGATGGGAGAGAGCTGGCACA 777
Query 779 ACAACCACCATGCCTTTGAGGCGTCGGCTAGACACGGACTGGAATGGTATCAGGTAGACT 838
|||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct 778 ACAACCACCATGCCTTTGAGGCCTCGGCCAGGCACGGACTGGAATGGTATCAGGTAGACT 837
Query 839 TAACTTGGTACCTCATTTGGTTCTTCCAGGCTCTCGGTTTAGCCACCGATGTCAAATTGC 898
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct 838 TAACTTGGTACCTCATTTGTTTCTTCCAAGCTCTCGGTTTAGCCACGGATGTCAAATTGC 897
Query 899 CTACCGATGCTCAGAAA-CGCAAGAT-GGCTTTCGCTCGTTAGTC 941
||||||||||||| ||| || || || ||||||||||||||||||
Sbjct 898 CTACCGATGCTCA-AAAGCGAAA-ATTGGCTTTCGCTCGTTAGTC 940
> AT1G06120.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1855943-1857718 FORWARD LENGTH=1122
Length=1122
Score = 1314 bits (711), Expect = 0.0
Identities = 849/916 (93%), Gaps = 8/916 (1%)
Strand=Plus/Plus
Query 30 CGACGGTCCAATGGGGGACACTACTAAGGACGATGGCTCTAGCCAAAGCAAAGCGGTACG 89
|||||||||||||||||||| | |||||||||| ||||||||||||||||||| || ||
Sbjct 11 CGACGGTCCAATGGGGGACAAAAATAAGGACGATAGCTCTAGCCAAAGCAAAGCAGTGCG 70
Query 90 TAGGGGAAAAAGAGCGTTCTTTTTCAGGAAATGGACCCGGATCGATGTAATGAGAGCTTC 149
|| || ||||||||||||| |||||||||||||||||||| | ||||||||||||| |||
Sbjct 71 TAAGGAAAAAAGAGCGTTCCTTTTCAGGAAATGGACCCGGGTTGATGTAATGAGAGTTTC 130
Query 150 GGCTGTTGGGTCTGTGCATCTATTGTGTCTATTGGCACCGTTTAACTTCAAATGGGAAGC 209
|||||||||| ||||||||||||||||||||||||| |||||||||| || |||||||||
Sbjct 131 GGCTGTTGGGGCTGTGCATCTATTGTGTCTATTGGCTCCGTTTAACTACACATGGGAAGC 190
Query 210 TTTTCGGTTTGGTG-TGATTCTCGCTATAGT-GACTAGTCTCAGCATTACATTTTCATAC 267
||| ||||||| || | || ||| |||| | ||||| ||||||||||||||||||||||
Sbjct 191 TTTCCGGTTTGCTGCT-ATGGTCGGTATA-TCGACTAATCTCAGCATTACATTTTCATAC 248
Query 268 CATAGGAACTTGACTCACCGGAGCTTTAAGCTCCCTAAATGGCTTGAATATCTATTCGCT 327
|||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct 249 CATAGGAACTTGACTCACCGAAGCTTTAAGCTTCCTAAATGGCTTGAATATCCATTCGCT 308
Query 328 TACACTGCCCTTTTCGCGCTTCAGGGTCATCCGATAGATTGGGTGAGCACGCATAGGTTC 387
||| |||||||||||||||||||||||||||| |||||||||||||| || |||||||||
Sbjct 309 TACTCTGCCCTTTTCGCGCTTCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTC 368
Query 388 CATCACCAGTTCACAGATTCAGACCGTGACCCACATAGTCCTATAGAAGGATTTTGGTTC 447
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 369 CATCACCAGTTCACAGATTCGGACCGTGACCCACATAGTCCTATCGAAGGATTTTGGTTC 428
Query 448 AGTCACGTCTTGTGGATATTCGACACCAGTTATATCAGAGAAAAGTGTGGAGGACGTGAC 507
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 429 AGTCACGTCTTTTGGATATTCGACACCAGTTACATCAGAGAAAAGTGTGGAGGACGTGAC 488
Query 508 AACGTGATGGACTTGAAGAAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGGCCTC 567
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||
Sbjct 489 AACGTGATGGACTTGAAGCAACAATGGTTCTATAGGTTTCTTCAAAACACAATTGGTCTC 548
Query 568 CACATCTTATCATTTTGGACT-CTCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTG 626
||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 549 CACATCTTAACATTTTGGA-TCCTCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTG 607
Query 627 CG-GCGTGGGTGTGGGAGGAGCAATCGGTTACAACGGGACTTGGCTCATAAACTCAGCAT 685
| |||||||||| |||||||||||||||||| | | |||||||||||||||||| ||||
Sbjct 608 -GAGCGTGGGTGTTGGAGGAGCAATCGGTTACCATGCGACTTGGCTCATAAACTCGGCAT 666
Query 686 GCCATATTTGGGGCACGCAAGCATGGAATACCAAGGACACTTCTCGTAACGTTTGGTGGC 745
||||||||||||| ||| ||||||||| || |||||||| ||||||||| |||||||||
Sbjct 667 GCCATATTTGGGGTTCGCGAGCATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGC 726
Query 746 TAGGGCCATTCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGG 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 727 TAGGGCCATTCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGG 786
Query 806 CTAGACACGGACTGGAATGGTATCAGGTAGACTTAACTTGGTACCTCATTTGGTTCTTCC 865
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 787 CTAGGCACGGGCTGGAATGGTATCAGGTAGACTTAACGTGGTACCTCATTTGGTTCTTCC 846
Query 866 AGGCTCTCGGTTTAGCCACCGATGTCAAATTGCCTACCGATGCTCAGAAACGCAAGATGG 925
||| ||||||||||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct 847 AGGTTCTCGGTTTAGCCACAGATGTCAAATTGCCTACCGATGCTCAGAAGCGAAAAATGT 906
Query 926 CTTTCGCTCGTTAGTC 941
|||| |||||||||||
Sbjct 907 CTTTAGCTCGTTAGTC 922
> AT1G06100.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1851530-1853019 FORWARD LENGTH=900
Length=900
Score = 1024 bits (554), Expect = 0.0
Identities = 783/894 (88%), Gaps = 14/894 (2%)
Strand=Plus/Plus
Query 52 ACTAAGGACGATGGCTCTAGCCAAAGCAAAGCGGTACGTAGGGGAAAAAGAGCGTTCT-T 110
||||||||||||||||||||||||| ||| | || |||| || |||||||||| | | |
Sbjct 13 ACTAAGGACGATGGCTCTAGCCAAAAAAAATCAGTGCGTAAGGAAAAAAGAGCG-TATGT 71
Query 111 TTTCAGGAAATGGACCCGGATCGATGTAATGAGAGCTTCGGCTGTTGGGTCTGTGCATCT 170
||| ||||||||||||| | ||||||| |||||||||| ||||||| | ||||||||
Sbjct 72 TTTAAGGAAATGGACCCAGTTCGATGTTGGGAGAGCTTCGACTGTTGGAACCGTGCATCT 131
Query 171 ATTGTGTCTATTGGCACCGTTTAACTTCAAATGGGAAGCTTTTCGGTTTGGTGTGATTCT 230
|||||||||||||| || ||||||| |||||||||||| || ||||| ||| | |||||
Sbjct 132 GTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCATTCCGGTTCGGTATAATTCT 191
Query 231 CGCTATAGTGACTAGTCTCAGCATTACATTTTCATACCATAGGAACTTGACTCACCGGAG 290
||| ||| |||| | ||| |||||||||| || ||||||||||||||||||||||||||
Sbjct 192 CGCCATACTGACAAACCTCTGCATTACATTCTCGTACCATAGGAACTTGACTCACCGGAG 251
Query 291 CTTTAAGCTCCCTAAATGGCTTGAATATCTATTCGCTTACACTGCCCTTTTCGCGCTTCA 350
||||||||| || |||||||||||||||| ||||||||| |||| ||||| || |||||
Sbjct 252 CTTTAAGCTACCGAAATGGCTTGAATATCCATTCGCTTATTCTGCTCTTTTGGCACTTCA 311
Query 351 GGGTCATCCGA-TAGATTGGGTGAGCACGCATAGGTTCCATCACCAGTTCACAGATTCAG 409
|||| |||| | | ||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 312 GGGTGATCC-ATTGGATTGGGTGAGCATACATAGATTCCATCACCAGTTCACAGATTCTG 370
Query 410 ACCGTGACCCACATAGTCCTATAGAAGGATTTTGGTTCAGTCACGTCTTGTGGATATTCG 469
||||||| |||||||| |||||||||||||| ||||||||||| || ||||||||||| |
Sbjct 371 ACCGTGATCCACATAGCCCTATAGAAGGATTCTGGTTCAGTCATGTTTTGTGGATATTTG 430
Query 470 ACACCAG-TTATATCAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGACTTGAAGAAA 528
||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct 431 ACACC-GATTATATCAGAGAAAAGTGTGGAAGACGTAACAACGTGATGGACTTGAAGCAA 489
Query 529 CAATGGTTCTATAGGTTTCTTCGAAACACAATTGG-CCTCCACATCTTATCATTTTGGAC 587
|||||||||||||||||||| ||| || |||| |||||||||||| ||||||||||
Sbjct 490 CAATGGTTCTATAGGTTTCTAAAAAAGAC-GTTGGTTCTCCACATCTTAGCATTTTGGAC 548
Query 588 TCTCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTGCGGC-GTGGGTGTGGGAGGAG 646
||| |||| ||||||||||||||||||||||||||||| | | |||||| | |||||||
Sbjct 549 CCTCATCTACTTATGGGGTGGTCTACCTTACCTAACTTG-GACTGTGGGTTTTGGAGGAG 607
Query 647 CAATCGGTTACAACGGGACTTGGCTCATAAACTCAGCATGCCATATTTGGGGCACGCAAG 706
||| |||||| | |||||||||||| |||| || |||||||||||||| || ||||||
Sbjct 608 TAATTGGTTACCATGGGACTTGGCTCGTAAATTCGGCATGCCATATTTGTGGTTCGCAAG 667
Query 707 CATGG-AATACCAAGGACACTTCTCGTAACGTTTGGTGGCTAGGGCCATTCACGATGGGA 765
| ||| || ||||| ||||| || ||||||||||||||||||| || ||| || ||||||
Sbjct 668 CGTGGCAA-ACCAATGACACCTCACGTAACGTTTGGTGGCTAGCGCTATTGACTATGGGA 726
Query 766 GAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGACACGGACTGGAATGG 825
||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct 727 GAGAGCTGGCACAACAACCACCATGCCTTTGAGACGTCGGCTAGGCACGGACTAGAATGG 786
Query 826 TATCAGGTAGACTTAACTTGGTACCTCATTTGGTTCTTCCAGGCTCTCGGTTTAGCCACC 885
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 TATCAGTTAGACATAACTTGGTACCTCATTTGGTTCTTCCAGGCTCTCGGTTTAGCCACC 846
Query 886 GATGTCAAATTGCCTACCGATGCTCAGAAACGCAAGATGGCTTTC-GCTCGTTA 938
|||||||||| |||||||||||||||||||||||||||||| || | ||||||
Sbjct 847 AATGTCAAATTACCTACCGATGCTCAGAAACGCAAGATGGCTATCCG-TCGTTA 899
> AT1G06360.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1938963-1940459 REVERSE LENGTH=1152
Length=1152
Score = 627 bits (339), Expect = 8e-179
Identities = 618/751 (82%), Gaps = 26/751 (3%)
Strand=Plus/Plus
Query 162 TGTGCATC-TATTGTGTCTATTGGCACCGTTTAACTTCAAATGGGAAGCTTTTCGGTTTG 220
|||||| | | |||||||| |||||||| ||||||| |||||||||||| || ||||| |
Sbjct 165 TGTGCA-CTTTTTGTGTCTCTTGGCACCATTTAACTACAAATGGGAAGCATTACGGTTCG 223
Query 221 G--T-GTGATTCT-CGCTATAGTGACTAGTCTCAGCATTACATTTTCATACCATAGGAAC 276
| | ||| ||| ||| || ||||| |||||||| ||||| |||||||||||||||
Sbjct 224 GTTTCGTG-CTCTACGC-AT--TGACTTCACTCAGCATCACATTCTCATACCATAGGAAC 279
Query 277 TTGACTCACCGGAGCTTTAAGCTCCCTAAATGGCTTGAATAT-CTATTCGCTTACACTGC 335
||| ||||||||||||||||||| || ||||||||||||||| || || ||||| |||
Sbjct 280 TTGGCTCACCGGAGCTTTAAGCTTCCGAAATGGCTTGAATATCCT-TTAGCTTATTTTGC 338
Query 336 CCTTTTCGCGCTTCAGGGTCATCCGATAGATTGGGTGAGCACGCATAGGTTCCATCACCA 395
|||| || ||||||||| ||||| | ||||||||||||| |||||||||||||||||
Sbjct 339 TGTTTTTGCTCTTCAGGGTGATCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCA 398
Query 396 GTTCACAGATTCAGACCGTGACCCACATAGTCCTATAGAAGGATTTTGGTTCAGTCACGT 455
|||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct 399 GTTCACAGATTCTGACCGTGACCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGT 458
Query 456 CTTGTGGATAT-TCGACAC-CAGTTATATCAGAGAAAAGTGTGGAGGACGTGACAACGTG 513
| |||||||| | ||||| | ||||||||| | | ||||||||||||||| ||||||||
Sbjct 459 GTGGTGGATATGT-GACACTC-GTTATATCAAATATAAGTGTGGAGGACGTAACAACGTG 516
Query 514 ATGGACTTGAAGAAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGGCCTCCACATC 573
|||||||||||| | |||||||||||| ||||||| |||| |||||||| ||||| ||
Sbjct 517 ATGGACTTGAAGCAGCAATGGTTCTATTGGTTTCTACGAATGACAATTGGTTTCCACGTC 576
Query 574 TTA-TCATTTTGGACTCTCGTCTAT-T-TATGGGGTGGTCTACCTTACCTAACTTGCGGC 630
||| | ||||||||| || ||||| | ||||| |||| |||||||||| || ||||||
Sbjct 577 TTAATG-TTTTGGACTGTCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCGGC 633
Query 631 GTGGGTGTGGGAGGAGCAATCGGTTACAACGGGACTTGGCTCATAAACTCAGCATGCCAT 690
| ||| || ||||| | || || ||| ||| ||| |||||| | ||||| |||||||||
Sbjct 634 GGGGGCGTTGGAGGTGTGATTGGGTACCACGTGACATGGCTCGTGAACTCGGCATGCCAT 693
Query 691 ATTTGGGGCACGCA-AGCATGGAATACCAAGGACACTTCTCGTAACGTTTGGTGGCTAGG 749
|||||||| || | | ||||||| || || ||||| ||||||||||||||||||||| |
Sbjct 694 ATTTGGGGTTCG-AGATCATGGAAGACTAAAGACACATCTCGTAACGTTTGGTGGCTAAG 752
Query 750 GCC-ATTCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTA 808
| ||| || ||||||||||| |||||||| || ||||| ||||||||| | ||||| |
Sbjct 753 -CTTATTTACAATGGGAGAGAGTTGGCACAATAATCACCACGCCTTTGAGTCATCGGCGA 811
Query 809 GACACGGACTGGAATGGTATCAGGTAGACTTAACTTGGTACCTCATTTGGTTCTTCCAGG 868
| || ||| |||| |||| ||| ||||| |||||||||| || ||| | | || |||
Sbjct 812 GGCAAGGATTGGAGTGGTGGCAGATAGACATAACTTGGTATCTTATTCGACTATTTGAGG 871
Query 869 CTCTCGGTTTAGCCACCGATGTCAAATTGCC 899
|||||| |||||||| || || ||||||||
Sbjct 872 TTCTCGGGTTAGCCACTGACGTGAAATTGCC 902
> AT1G06350.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1935293-1936819 REVERSE LENGTH=1150
Length=1150
Score = 593 bits (321), Expect = 8e-169
Identities = 722/909 (79%), Gaps = 53/909 (6%)
Strand=Plus/Plus
Query 58 GACGATGGCTCTAGCCAAAGCAAAGCGGT-ACGTA--GGGGAAAA-AGAGCGTTCTTTTT 113
||||||||||| |||| ||||| || ||| | ||| | |||| || ||| | ||||
Sbjct 49 GACGATGGCTCCAGCCGAAGCAGAGTGGTGA-GTACTATGCAAAAGAGGGCG-T-ATTTT 105
Query 114 CAG-GA-AATGGACCCG--GATCGATGTAATGAGAGCTTC-GGCTGTTG-GGTCTGTGCA 167
||| || ||||| ||| | ||||||| | ||||| || | | |||| | | ||||||
Sbjct 106 CAGAGACAATGG--CCGTTGGTCGATGTCGTAAGAGCGTCAGTC-GTTGTGAT-TGTGCA 161
Query 168 TC-TATTGTGTCTATTGGCACCGTTTAACTTCAAATGGGAAGCTTTTCGGTTTGGTGTGA 226
| | |||||||| ||||| |||||||||||||||||||||||||| ||||| ||| ||
Sbjct 162 -CTTTTTGTGTCTCTTGGCGCCGTTTAACTTCAAATGGGAAGCTTTACGGTTCGGTTTGG 220
Query 227 T--TC-TCGCTATAGTGACTAGTCTCAGCATTACATTTTCATACCATAGGAACTTGACTC 283
| || |||| | |||||| |||||||| ||||| |||| ||||||||||||| |||
Sbjct 221 TGCTCTTCGC-GT--TGACTACACTCAGCATCACATTCTCATTCCATAGGAACTTGTCTC 277
Query 284 ACCGGAGCTTTAAGCTCCCTAAATGGCTTGAATAT-CTATTCGCTTACACTGCCCTTTTC 342
|||| ||||| ||| | || |||||||| |||||| || | ||||| |||| |||||
Sbjct 278 ACCGTAGCTTCAAGATACCAAAATGGCTCGAATATCCT-TGGGCTTATTCTGCTGTTTTC 336
Query 343 GCGCTTCAGGGTCATCCGATAGATTGGGTGAGCACGCATAGGTTCCATCACCAGTTCACA 402
|| ||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||
Sbjct 337 GCTCTTCAGGGTGATCCAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACA 396
Query 403 GATTCAGACCGTGACCCACATAGTCCTATAGAAGGATT-TTGGTTCAGTCACGTCTTGTG 461
||||| ||||| ||||||||||| |||| ||||||||| ||| ||||| || |||||||
Sbjct 397 GATTCGGACCGCGACCCACATAGCCCTAAAGAAGGATTATTG-TTCAGCCATATCTTGTG 455
Query 462 GATATTCGACACC-AGTTATATCAGAGAAAAGTGTGGAGGACGTGACAACGTGAT-GGAC 519
|||||| |||||| | | | |||| | | ||||||||||||||||||||||| || ||||
Sbjct 456 GATATTTGACACCCAAT-ACATCAAATACAAGTGTGGAGGACGTGACAACGT-ATTGGAC 513
Query 520 TTGAAGAAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGGCC-TCCACATCTTA-T 577
|||||||| |||||||| |||| |||||| |||| || |||| | | ||||||||| |
Sbjct 514 TTGAAGAAGCAATGGTTTTATAAGTTTCTACGAAGGACTATTG-CTGTTCACATCTTAAT 572
Query 578 CATTTTGGACTC-TCGTCTAT-T-TATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGG 634
|||||||| | || ||||| | ||||| |||| |||||||||| || ||||||| ||
Sbjct 573 G-TTTTGGAC-CATCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCGGCGGGG 628
Query 635 GTGTGGGAGGAGCAATCGGTTA-CAACGGGACTTGGCTCATAAACTCAGCATGCCATATT 693
| || ||| ||||| || || || ||| |||||| ||||||| ||||||||||||
Sbjct 629 GCGTTGGAATTTTTATCGGGTATCA-CGTGACATGGCTCGTAAACTCGGCATGCCATATT 687
Query 694 TGGGGCACGCAAG--CATGGAATACCAAGGACACTTCTCGTAACGTTTGGTGGCTAGGGC 751
||||| | ||| | |||||||| || ||||| |||||||||||||||||| || |
Sbjct 688 TGGGGTTC--AAGGTCGTGGAATACTAAAGACACATCTCGTAACGTTTGGTGGTTAAGTT 745
Query 752 CATTCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGAC 811
|| ||||||||||| || |||||||||||||| || || |||||| | ||||| || |
Sbjct 746 TGTTTACGATGGGAGAAAGTTGGCACAACAACCATCACGCGTTTGAGTCATCGGCGAGGC 805
Query 812 ACGGACTGGAATGGTATCAGGTAGACTTAACTTGGTACCTCATTTGGTTCTTCCAGGCTC 871
| ||| |||| |||| ||| ||||| ||||||||||||||||| | | || ||| ||
Sbjct 806 AAGGATTGGAGTGGTGGCAGATAGACATAACTTGGTACCTCATTCGACTATTTGAGGTTC 865
Query 872 TCGGTTTAGCCACCGATGTCAAATTGCC-TACCGATGCTC-AGAAACGCAAGATGGCTTT 929
||||| ||||||| ||||| |||||||| | | || ||| |||||| ||||||||| |
Sbjct 866 TCGGTATAGCCACTGATGTGAAATTGCCCT-CGGAA-CTCCAGAAACAAAAGATGGCTCT 923
Query 930 CGCTCGTTA 938
|| ||||||
Sbjct 924 CGTTCGTTA 932
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46014478652
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5