BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470653
Length=959
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06350.1 | Symbols: | Fatty acid desaturase family protein ... 1332 0.0
AT1G06360.1 | Symbols: | Fatty acid desaturase family protein ... 1038 0.0
AT1G06090.1 | Symbols: | Fatty acid desaturase family protein ... 584 5e-166
AT1G06120.1 | Symbols: | Fatty acid desaturase family protein ... 569 1e-161
> AT1G06350.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1935293-1936819 REVERSE LENGTH=1150
Length=1150
Score = 1332 bits (721), Expect = 0.0
Identities = 884/961 (92%), Gaps = 17/961 (2%)
Strand=Plus/Plus
Query 1 TTATAACTCAAACGAATACAATTCCTCAACGGTCCGATATGTGTGATCCCACTAGAGACG 60
||||||||||||| ||||||| | | | || ||||||||||||||||||||||||||
Sbjct 1 TTATAACTCAAACAAATACAA-T--T---C-GT-CGATATGTGTGATCCCACTAGAGACG 52
Query 61 ATGTCTCCAGCCAAAGCAGAGCGGTCAGTA-TA-G-AAAAAAGGGCGTATTTTCAGAGAA 117
||| |||||||| |||||||| ||| |||| || | |||| ||||||||||||||||||
Sbjct 53 ATGGCTCCAGCCGAAGCAGAGTGGTGAGTACTATGCAAAAGAGGGCGTATTTTCAGAGAC 112
Query 118 AATGGCCCTTGGTCGATGTTATAAGAGCGTTAACCGTTGTGATAGTGCACTTTTTGTGTC 177
||||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||||||
Sbjct 113 AATGGCCGTTGGTCGATGTCGTAAGAGCGTCAGTCGTTGTGATTGTGCACTTTTTGTGTC 172
Query 178 TCTTGGCGCCGTTTAACTAT-GAATGGGAAGCTTTTCGGTTCGGTTTGGTGCTCTTCGTG 236
|||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |
Sbjct 173 TCTTGGCGCCGTTTAACT-TCAAATGGGAAGCTTTACGGTTCGGTTTGGTGCTCTTCGCG 231
Query 237 ATAACTACACTCAGCATCACCTTCTCATACCATAGGAACTTGTCTCACCGGAGCTTCAAG 296
| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||
Sbjct 232 TTGACTACACTCAGCATCACATTCTCATTCCATAGGAACTTGTCTCACCGTAGCTTCAAG 291
Query 297 ATCCCGAAATGGATCGAATATCCTTTTGCTTATTCTGCTGTTTTCGCTCTCCAGGGTGAT 356
|| || |||||| |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 292 ATACCAAAATGGCTCGAATATCCTTGGGCTTATTCTGCTGTTTTCGCTCTTCAGGGTGAT 351
Query 357 CCAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACGGATTCTGACCGTGAC 416
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 352 CCAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACAGATTCGGACCGCGAC 411
Query 417 CCACATAGCCCTAAAGAAGGATTATGGTTCAGCCATATATTGTGGATATTTGACACCCAA 476
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 412 CCACATAGCCCTAAAGAAGGATTATTGTTCAGCCATATCTTGTGGATATTTGACACCCAA 471
Query 477 TACATCAAATACAAGTGTGGAGGACGTGACAACGTAATGGACTTGAAGAAGCAATGGTTC 536
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 472 TACATCAAATACAAGTGTGGAGGACGTGACAACGTATTGGACTTGAAGAAGCAATGGTTT 531
Query 537 TATAAGTTTCTACGAAGGACTATTGCTCTTCACATCGCAATGTTTTGGACCGTCCTCTAT 596
||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||
Sbjct 532 TATAAGTTTCTACGAAGGACTATTGCTGTTCACATCTTAATGTTTTGGACCATCCTCTAT 591
Query 597 CTCTACGGTGGTTTACCTTACCTTACATGCGGCGGGGGTGTTGGAGGTGTGATAGGGTAT 656
||||| |||||||||||||||||||||||||||||||| |||||| | | || ||||||
Sbjct 592 CTCTATGGTGGTTTACCTTACCTTACATGCGGCGGGGGCGTTGGAATTTTTATCGGGTAT 651
Query 657 CACGTGACCTTTCTCGTAAACTCGGCATGCCATATTTGGGGTTCAAGGTCGTGGAAGACT 716
|||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 652 CACGTGACATGGCTCGTAAACTCGGCATGCCATATTTGGGGTTCAAGGTCGTGGAATACT 711
Query 717 AAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGTTTACGATGGGAGAGAGTTGGCAC 776
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 712 AAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGTTTACGATGGGAGAAAGTTGGCAC 771
Query 777 AACAACCACCACGCGTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGAC 836
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 AACAACCATCACGCGTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGAC 831
Query 837 ATAACTTGGTACCTCATTCGACTATTTGAAGTTCTTGG-ATTAGCCACTGATGTGAAATT 895
||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||
Sbjct 832 ATAACTTGGTACCTCATTCGACTATTTGAGGTTCTCGGTAT-AGCCACTGATGTGAAATT 890
Query 896 ACCCTCGGA-CTTCCAGAAACAAAAGATGGCGATCGTTCGTTAATATTTATTTTGAGATC 954
|||||||| || |||||||||||||||||| |||||||||||| |||||| ||| |||
Sbjct 891 GCCCTCGGAACT-CCAGAAACAAAAGATGGCTCTCGTTCGTTAATGTTTATTCTGAAATC 949
Query 955 T 955
|
Sbjct 950 T 950
> AT1G06360.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1938963-1940459 REVERSE LENGTH=1152
Length=1152
Score = 1038 bits (562), Expect = 0.0
Identities = 806/924 (87%), Gaps = 16/924 (2%)
Strand=Plus/Plus
Query 3 ATAACTCAAACG-AATACAATTCCTCAACGGTCCGATATGTGTGATCCCACTAGAGACGA 61
|||||||||| | || |||| |||||||||| || ||||||||||||| |||||| ||
Sbjct 10 ATAACTCAAA-GAAAAACAACCCCTCAACGGT-CG--ATGTGTGATCCCATTAGAGAAGA 65
Query 62 TGTCTCCAGCCAAAGCA-GAGCGGTCAGTATA-GAAAAAAGGGCGTATTTTCAGAGAAAA 119
|| ||| | | |||| | | || || |||| | ||||||||| ||||| |||| ||| ||
Sbjct 66 TGGCTCTAACAAAAG-AGGCGCCGTGAGTA-AGGAAAAAAGGCCGTATATTCATAGAGAA 123
Query 120 TGGCCCTTGGTCGATGTTATAAGAGCGTTAACCGTTGT-GATAGTGCACTTTTTGTGTCT 178
||| | | || |||| | ||| |||||||||||||| | || |||||||||||||||||
Sbjct 124 TGGTCGTGGGCCGATATAATACGAGCGTTAACCGTTATCAAT-GTGCACTTTTTGTGTCT 182
Query 179 CTTGGCGCCGTTTAACTATGAATGGGAAGCTTTTCGGTTCGGTTTGGTGCTCTTCGTGA- 237
|||||| || |||||||| |||||||||| || ||||||||||| ||||||| || |
Sbjct 183 CTTGGCACCATTTAACTACAAATGGGAAGCATTACGGTTCGGTTTCGTGCTCTACG-CAT 241
Query 238 TAACTACACTCAGCATCACCTTCTCATACCATAGGAACTTGTCTCACCGGAGCTTCAAGA 297
| ||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct 242 TGACTTCACTCAGCATCACATTCTCATACCATAGGAACTTGGCTCACCGGAGCTTTAAGC 301
Query 298 TCCCGAAATGGATCGAATATCCTTTTGCTTATTCTGCTGTTTTCGCTCTCCAGGGTGATC 357
| ||||||||| | ||||||||||| ||||||| ||||||||| ||||| ||||||||||
Sbjct 302 TTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCTGTTTTTGCTCTTCAGGGTGATC 361
Query 358 CAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACGGATTCTGACCGTGACC 417
| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 362 CGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACAGATTCTGACCGTGACC 421
Query 418 CACATAGCCCTAAAGAAGGATTATGGTTCAGCCATATATTGTGGATATTTGACACCCAAT 477
|||||||||||| |||||||| |||||||| ||| | | |||||||| |||||| | |
Sbjct 422 CACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTGTGGTGGATATGTGACACTCGTT 481
Query 478 ACATCAAATACAAGTGTGGAGGACGTGACAACGTAATGGACTTGAAGAAGCAATGGTTCT 537
| |||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||
Sbjct 482 ATATCAAATATAAGTGTGGAGGACGTAACAACGTGATGGACTTGAAGCAGCAATGGTTCT 541
Query 538 ATAAGTTTCTACGAAGGACTATTGCTCTT-CACATCGCAATGTTTTGGACCGTCCTCTAT 596
|| ||||||||||| ||| |||| | || ||| || |||||||||||| |||||||||
Sbjct 542 ATTGGTTTCTACGAATGACAATTGGT-TTCCACGTCTTAATGTTTTGGACTGTCCTCTAT 600
Query 597 CTCTACGGTGGTTTACCTTACCTTACATGCGGCGGGGGTGTTGGAGGTGTGATAGGGTAT 656
||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 601 CTCTATGGTGGTTTACCTTACCTTACATGCGGCGGGGGCGTTGGAGGTGTGATTGGGTAC 660
Query 657 CACGTGACCTTTCTCGTAAACTCGGCATGCCATATTTGGGGTTCAAGGTCGTGGAAGACT 716
|||||||| | ||||| |||||||||||||||||||||||||| || || |||||||||
Sbjct 661 CACGTGACATGGCTCGTGAACTCGGCATGCCATATTTGGGGTTCGAGATCATGGAAGACT 720
Query 717 AAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGTTTACGATGGGAGAGAGTTGGCAC 776
||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||
Sbjct 721 AAAGACACATCTCGTAACGTTTGGTGGCTAAGCTTATTTACAATGGGAGAGAGTTGGCAC 780
Query 777 AACAACCACCACGCGTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGAC 836
|| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 AATAATCACCACGCCTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGAC 840
Query 837 ATAACTTGGTACCTCATTCGACTATTTGAAGTTCTTGGATTAGCCACTGATGTGAAATTA 896
||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||||||
Sbjct 841 ATAACTTGGTATCTTATTCGACTATTTGAGGTTCTCGGGTTAGCCACTGACGTGAAATTG 900
Query 897 CCCTCGGACTTCCAGAAACA-AAA 919
|||||||| |||||||||| |||
Sbjct 901 CCCTCGGAAATCCAGAAACAGAAA 924
> AT1G06090.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1847883-1849693 FORWARD LENGTH=1131
Length=1131
Score = 584 bits (316), Expect = 5e-166
Identities = 716/905 (79%), Gaps = 43/905 (5%)
Strand=Plus/Plus
Query 11 AACGAATACAATTCCTCAACGGTCCGATATGTGTGATC-CCACTAGA-GACGATGTCTCC 68
||| ||| | ||||||| ||||||| | ||| | || | |||| | | ||||||| ||
Sbjct 14 AAC-AATCCCATTCCTCGACGGTCC-A-ATGGGGGA-CACCAC-AAAGGACGATGGGTCT 68
Query 69 AGCCAAAGCAGAGCGGT-CAGTATAGAAAAAAGGGC-GT-ATTTTCAGAGAAAATGG-CC 124
|||||||| | |||||| | || |||||||| || | ||||||| | |||||| ||
Sbjct 69 AGCCAAAGTAAAGCGGTGC-GTGGGGAAAAAAGAGCATTCTTTTTCAG-G-AAATGGACC 125
Query 125 CTTGG-TCGATGTTA-TAAGAGCGTT-AACCGTT-GTGATAGTGCACT-TTTTGTGTCTC 179
| || ||||| || ||||| || | ||| | | | ||||| | | ||||||||
Sbjct 126 C--GGATCGAT-ATAGCGAGAGC-TTCGGCTGTTGGGGCT-GTGCA-TCTATTGTGTCTG 179
Query 180 TTGGCGCCGTTTAACTATGAATGGGAAGCTTTTCGGTTCGGTTTGGTGCTCTTCG-TGAT 238
||||| |||||||||||| ||||||||||| | ||||||||| || | || ||| | ||
Sbjct 180 TTGGCTCCGTTTAACTATAAATGGGAAGCTCTCCGGTTCGGTGTGAT--TC-TCGCT-AT 235
Query 239 A---ACTACACTCAGCATCACCTTCTCATACCATAGGAACTTGTCTCACCGGAGCTTCAA 295
| |||| || ||||| || || |||||||||||||||||| ||||| |||||| ||
Sbjct 236 AGTGACTAGTCTTAGCATTACATTTTCATACCATAGGAACTTGACTCACAAGAGCTTTAA 295
Query 296 GATCCCGAAATGGATCGAATATCCTTTTGCTTATTCTGCTGTTTTCGCTCTCCAGGGTGA 355
| | || |||||| | |||||||| || ||||| ||||| ||||||| || |||||| |
Sbjct 296 GCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTTCGCGCTTCAGGGTCA 355
Query 356 TCCAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACGGATTCTGACCGTGA 415
|||||| ||||||||||| | |||||||||||||||||||||||| ||||| ||||||||
Sbjct 356 TCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCACAGATTCAGACCGTGA 415
Query 416 CCCACATAGCCCTAAAGAAGGATTATGGTTCAGCCATATATTGTGGATATTTGACACCCA 475
||||||||| |||| |||||||| |||||||| || | || |||||||| |||||| |
Sbjct 416 CCCACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTCTTTTGGATATTCGACACC-A 474
Query 476 AT-ACATCAAATACAAGTGTGGAGGACGTGACAACGTAATGGACTTGAAG-AAGCAATGG 533
| |||||| | | ||||| ||||||||||||||||| |||||||||||| || ||||||
Sbjct 475 GTTACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGATGGACTTGAAGCAA-CAATGG 533
Query 534 TTCTATAAGTTTCTACGAAGGACTATTGCTCTTCACATCGCAATGTTTTGGACCGTCCTC 593
||||||| |||||| |||| || |||| ||| |||||| || ||||||||| || ||
Sbjct 534 TTCTATAGGTTTCTTCGAAACACAATTGGTCTCCACATCTTAACATTTTGGACCCTCGTC 593
Query 594 TATCTCTACGGTGGTTTACCTTACCTTACATGCGGCGGGGGTGTTGGAGGTGTGATAGGG 653
||| | | |||||| |||||||||| || ||||||| |||||||||||| || ||
Sbjct 594 TATTTATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGGGTGTTGGAGGAACAATCGGT 653
Query 654 TATCAC-GTGACCTTT-CTCGTAAACTCGGCATGCCATATTTGGGGTTCAAG-GTCGTGG 710
|| || | ||| || ||| |||||||||||||||||||||||||||| | | | |||
Sbjct 654 TA-CAATGGGAC-TTGGCTCATAAACTCGGCATGCCATATTTGGGGTTCGCGAG-CATGG 710
Query 711 AAGACTAAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGTTTACGATGGGAGAGAGT 770
|| ||||| ||||| ||||||||| |||||||| || | || ||||||||||||||
Sbjct 711 AACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTCACGATGGGAGAGAGC 770
Query 771 TGGCACAACAACCACCACGCGTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAG 830
||||||||||||||||| || |||||| | ||||| ||||| ||| |||| |||| |||
Sbjct 771 TGGCACAACAACCACCATGCCTTTGAGGCCTCGGCCAGGCACGGACTGGAATGGTATCAG 830
Query 831 ATAGACATAACTTGGTACCTCATTCGACTATTTGAAGTTCTTGGATTAGCCACTGATGTG 890
||||| ||||||||||||||||| | | || ||| ||| || |||||||| |||||
Sbjct 831 GTAGACTTAACTTGGTACCTCATTTGTTTCTTCCAAGCTCTCGGTTTAGCCACGGATGTC 890
Query 891 AAATT 895
|||||
Sbjct 891 AAATT 895
> AT1G06120.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1855943-1857718 FORWARD LENGTH=1122
Length=1122
Score = 569 bits (308), Expect = 1e-161
Identities = 685/862 (79%), Gaps = 46/862 (5%)
Strand=Plus/Plus
Query 57 GACGAT-GTCTCCAGCCAAAGCAGAGCGGT-CAGTATA-GAAAAAAGGGCG-T-ATTTTC 111
|||||| | ||| |||||||||| ||| || | ||| | |||||||| ||| | |||||
Sbjct 39 GACGATAG-CTCTAGCCAAAGCAAAGCAGTGC-GTA-AGGAAAAAAGAGCGTTCCTTTTC 95
Query 112 AGAGAAAATGG-CCCTTGGTCGATGTTATAAGAGCGTT-AACCGTT-GTGATAGTGCACT 168
|| | |||||| ||| ||| ||||| || |||| || | ||| | | | ||||| |
Sbjct 96 AG-G-AAATGGACCC-GGGTTGATGTAATGAGAG-TTTCGGCTGTTGGGGCT-GTGCA-T 149
Query 169 -TTTTGTGTCTCTTGGCGCCGTTTAACTATGA-ATGGGAAGCTTTTCGGTTCGGTTTGGT 226
| |||||||| ||||| ||||||||||| | ||||||||| |||| ||||||| |
Sbjct 150 CTATTGTGTCTATTGGCTCCGTTTAACTA-CACATGGGAAGC-TTTC----CGGTTTGCT 203
Query 227 GCTCT--TC-GTGATA---ACTACA-CTCAGCATCACCTTCTCATACCATAGGAACTTGT 279
||| | || || ||| |||| | |||||||| || || ||||||||||||||||||
Sbjct 204 GCTATGGTCGGT-ATATCGACTA-ATCTCAGCATTACATTTTCATACCATAGGAACTTGA 261
Query 280 CTCACCGGAGCTTCAAGATCCCGAAATGGATCGAATATCCTTTTGCTTATTCTGCTGTTT 339
||||||| ||||| ||| | || |||||| | |||||||| || ||||| ||||| |||
Sbjct 262 CTCACCGAAGCTTTAAGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTT 321
Query 340 TCGCTCTCCAGGGTGATCCAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCA 399
|||| || |||||| ||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct 322 TCGCGCTTCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCA 381
Query 400 CGGATTCTGACCGTGACCCACATAGCCCTAAAGAAGGATTATGGTTCAGCCATATATTGT 459
| ||||| ||||||||||||||||| |||| |||||||| |||||||| || | || |
Sbjct 382 CAGATTCGGACCGTGACCCACATAGTCCTATCGAAGGATTTTGGTTCAGTCACGTCTTTT 441
Query 460 GGATATTTGACACCCA-ATACATCAAATACAAGTGTGGAGGACGTGACAACGTAATGGAC 518
||||||| |||| ||| ||||||| | | ||||||||||||||||||||||| ||||||
Sbjct 442 GGATATTCGACA-CCAGTTACATCAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGAC 500
Query 519 TTGAAG-AAGCAATGGTTCTATAAGTTTCTACGAAGGACTATTGCTCTTCACATCGCAAT 577
|||||| || ||||||||||||| |||||| | || || |||| ||| |||||| ||
Sbjct 501 TTGAAGCAA-CAATGGTTCTATAGGTTTCTTCAAAACACAATTGGTCTCCACATCTTAAC 559
Query 578 GTTTTGGA-CCGTCCTCTATCTCTACGGTGGTTTACCTTACCTTACATGCG-GCGGGGGT 635
||||||| || || ||||| | | |||||| |||||||||| || || | ||| ||||
Sbjct 560 ATTTTGGATCC-TCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTG-GAGCGTGGGT 617
Query 636 GTTGGAGGTGTGATAGGGTATCACGTGACCTT-TCTCGTAAACTCGGCATGCCATATTTG 694
|||||||| | || || || || | || ||| ||| ||||||||||||||||||||||
Sbjct 618 GTTGGAGGAGCAATCGGTTACCATGCGA-CTTGGCTCATAAACTCGGCATGCCATATTTG 676
Query 695 GGGTTCAAG-GTCGTGGAAGACTAAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGT 753
|||||| | | | ||||| ||||| ||||| ||||||||| |||||||| || | |
Sbjct 677 GGGTTCGCGAG-CATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCCAT 735
Query 754 TTACGATGGGAGAGAGTTGGCACAACAACCACCACGCGTTTGAGTCATCGGCGAGGCAAG 813
| |||||||||||||| ||||||||||||||||| || |||||| | ||||| ||||| |
Sbjct 736 TCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCACG 795
Query 814 GATTGGAGTGGTGGCAGATAGACATAACTTGGTACCTCATTCGACTATTTGAAGTTCTTG 873
| |||| |||| ||| ||||| |||| |||||||||||| | | || | ||||| |
Sbjct 796 GGCTGGAATGGTATCAGGTAGACTTAACGTGGTACCTCATTTGGTTCTTCCAGGTTCTCG 855
Query 874 GATTAGCCACTGATGTGAAATT 895
| |||||||| ||||| |||||
Sbjct 856 GTTTAGCCACAGATGTCAAATT 877
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46918693298
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5