BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470654
Length=984
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06360.1 | Symbols: | Fatty acid desaturase family protein ... 1565 0.0
AT1G06350.1 | Symbols: | Fatty acid desaturase family protein ... 1014 0.0
AT1G06100.1 | Symbols: | Fatty acid desaturase family protein ... 638 0.0
AT1G06090.1 | Symbols: | Fatty acid desaturase family protein ... 623 1e-177
AT1G06120.1 | Symbols: | Fatty acid desaturase family protein ... 619 1e-176
> AT1G06360.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1938963-1940459 REVERSE LENGTH=1152
Length=1152
Score = 1565 bits (847), Expect = 0.0
Identities = 940/985 (95%), Gaps = 6/985 (1%)
Strand=Plus/Plus
Query 1 ATACAACTCATAACTCAAACAAAAACAAGTCCTCAACGGTCGATGTGTGATCCCATTAGA 60
|||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1 ATACAAATCATAACTCAAAGAAAAACAACCCCTCAACGGTCGATGTGTGATCCCATTAGA 60
Query 61 GAAGATGGCTCTAGCCAAAGAGGCGCCTTGAGTAAGGAAAAAAGGCCGTATATTCATAGA 120
||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 61 GAAGATGGCTCTAACAAAAGAGGCGCCGTGAGTAAGGAAAAAAGGCCGTATATTCATAGA 120
Query 121 GAATGGTCGTGGGCTGATATAATAAGAGCGTTAACCGTTATGGTTGTGCACTTTTTGTGT 180
|||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 121 GAATGGTCGTGGGCCGATATAATACGAGCGTTAACCGTTATCAATGTGCACTTTTTGTGT 180
Query 181 CTCTTGGCACCGTTTAACTACAAATGGGAAGC-TCTACGGTTCGGTTTTGTGCTCTACGC 239
||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||||
Sbjct 181 CTCTTGGCACCATTTAACTACAAATGGGAAGCAT-TACGGTTCGGTTTCGTGCTCTACGC 239
Query 240 ATTGACTTCACTCAGCATTACATTCTCATACCATAGGAACTTGGCTCACCGGAGCTTCAA 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 240 ATTGACTTCACTCAGCATCACATTCTCATACCATAGGAACTTGGCTCACCGGAGCTTTAA 299
Query 300 GCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCTGTTTTTGCTCTTCAGGGTGA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 GCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCTGTTTTTGCTCTTCAGGGTGA 359
Query 360 TCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACTGATTCTGACCGTGA 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 360 TCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACAGATTCTGACCGTGA 419
Query 420 CCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTGTGGTGGATATGTGACACTCG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTGTGGTGGATATGTGACACTCG 479
Query 480 TTATATCAAATATAAGTGTGGAGGACGTAACAACGTGATGGACTTGAAGCAACAATGGTT 539
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 480 TTATATCAAATATAAGTGTGGAGGACGTAACAACGTGATGGACTTGAAGCAGCAATGGTT 539
Query 540 CTACAGGTTTCTACGAATGACAATTGGTTTCCACGTCTTAATGTTTTGGACTGTCCTCTA 599
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CTATTGGTTTCTACGAATGACAATTGGTTTCCACGTCTTAATGTTTTGGACTGTCCTCTA 599
Query 600 TCTCTATGGTGGTTTACCTTACCTTACATGCGGCGGGGGCGTTGGAGGTGTGATTGGGTA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TCTCTATGGTGGTTTACCTTACCTTACATGCGGCGGGGGCGTTGGAGGTGTGATTGGGTA 659
Query 660 CCACGTGACATGGCTCGTAAACTCGGCATGCCATATTTGGGGTTCGAGGTCATGGAAGAC 719
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 660 CCACGTGACATGGCTCGTGAACTCGGCATGCCATATTTGGGGTTCGAGATCATGGAAGAC 719
Query 720 TAAAGACACATCTCGTAACGTTTGGTGGCTAAGCTTATTTACAATGGGAGAGAGTTGGCA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TAAAGACACATCTCGTAACGTTTGGTGGCTAAGCTTATTTACAATGGGAGAGAGTTGGCA 779
Query 780 TAATAATCACCACGCGTTTGAGTCATCAGCGAGGCAAGGATTGGAGTGGTGGCAAATAGA 839
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 780 CAATAATCACCACGCCTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGA 839
Query 840 TATCACTTGGTATCTCATTCGACTATTTGAGGTTCTCGGATTAGCCACTGATGTGAAATT 899
|| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 840 CATAACTTGGTATCTTATTCGACTATTTGAGGTTCTCGGGTTAGCCACTGACGTGAAATT 899
Query 900 GCCCTCGGAATTTCAGAAACGGAAATTGGCTCTGATTCGTTGATATATCATCTGCATGAG 959
|||||||||| | ||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct 900 GCCCTCGGAAATCCAGAAACAGAAACTGGCTCTGACTCGTTGAT----CATCTGCATGAG 955
Query 960 AGATTTATCAGTATTTTACAGTTTT 984
||||||||||| |||||| | ||||
Sbjct 956 AGATTTATCAGAATTTTATATTTTT 980
> AT1G06350.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1935293-1936819 REVERSE LENGTH=1150
Length=1150
Score = 1014 bits (549), Expect = 0.0
Identities = 816/943 (87%), Gaps = 26/943 (3%)
Strand=Plus/Plus
Query 10 ATAACTCAAACAAAAACAAGTCCTCAACGGTCGATGTGTGATCCCATTAGAGAAGATGGC 69
|||||||||||||| |||| | || || | ||||||||||||| |||||| ||||||
Sbjct 3 ATAACTCAAACAAATACAA-T--TCGTCGAT--ATGTGTGATCCCACTAGAGACGATGGC 57
Query 70 TCTAGCCAAAG-AGGCGCCTTGAGTA--A-GGAAAAAAGGCCGTATATTCATAGAGAATG 125
|| |||| ||| | | | |||||| | | |||| ||| ||||| |||| ||| ||||
Sbjct 58 TCCAGCCGAAGCA-GAGTGGTGAGTACTATGCAAAAGAGGGCGTATTTTCAGAGACAATG 116
Query 126 GTCG-TGGGCTGATATAATAAGAGCGTTAACCGTTATGGTTGTGCACTTTTTGTGTCTCT 184
| || ||| | ||| | ||||||||| | |||| || |||||||||||||||||||||
Sbjct 117 GCCGTTGGTC-GATGTCGTAAGAGCGTCAGTCGTTGTGATTGTGCACTTTTTGTGTCTCT 175
Query 185 TGGCACCGTTTAACTACAAATGGGAAGCTCTACGGTTCGGTTTTGTGCTCTACGCATTGA 244
|||| |||||||||| ||||||||||||| ||||||||||||| ||||||| ||| ||||
Sbjct 176 TGGCGCCGTTTAACTTCAAATGGGAAGCTTTACGGTTCGGTTTGGTGCTCTTCGCGTTGA 235
Query 245 CTTCACTCAGCATTACATTCTCATACCATAGGAACTTGGCTCACCGGAGCTTCAAGCTTC 304
|| |||||||||| |||||||||| ||||||||||||| ||||||| ||||||||| | |
Sbjct 236 CTACACTCAGCATCACATTCTCATTCCATAGGAACTTGTCTCACCGTAGCTTCAAGATAC 295
Query 305 CGAAATGGCTTGAATATCCTTTAGCTTATTTTGCTGTTTTTGCTCTTCAGGGTGATCCGT 364
| |||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct 296 CAAAATGGCTCGAATATCCTTGGGCTTATTCTGCTGTTTTCGCTCTTCAGGGTGATCCAA 355
Query 365 TGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACTGATTCTGACCGTGACCCAC 424
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 356 TGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACAGATTCGGACCGCGACCCAC 415
Query 425 ATAGCCCTATCGAAGGATT-TTGGTTCAGTCATGTGTGGTGGATATGTGACACTCGTTAT 483
||||||||| |||||||| || |||||| ||| | | |||||||| |||||| | ||
Sbjct 416 ATAGCCCTAAAGAAGGATTATT-GTTCAGCCATATCTTGTGGATATTTGACACCCAATAC 474
Query 484 ATCAAATATAAGTGTGGAGGACGTAACAACGTGA-TGGACTTGAAGCAA-CAATGGTTCT 541
|||||||| ||||||||||||||| ||||||| | ||||||||||| || |||||||| |
Sbjct 475 ATCAAATACAAGTGTGGAGGACGTGACAACGT-ATTGGACTTGAAG-AAGCAATGGTTTT 532
Query 542 ACAGGTTTCTACGAATGACAATTGGT-TTCCACGTCTTAATGTTTTGGACTGTCCTCTAT 600
| | ||||||||||| ||| |||| | || ||| |||||||||||||||| ||||||||
Sbjct 533 ATAAGTTTCTACGAAGGACTATTGCTGTT-CACATCTTAATGTTTTGGACCATCCTCTAT 591
Query 601 CTCTATGGTGGTTTACCTTACCTTACATGCGGCGGGGGCGTTGGAGGTGTGATTGGGTAC 660
||||||||||||||||||||||||||||||||||||||||||||| | | || |||||
Sbjct 592 CTCTATGGTGGTTTACCTTACCTTACATGCGGCGGGGGCGTTGGAATTTTTATCGGGTAT 651
Query 661 CACGTGACATGGCTCGTAAACTCGGCATGCCATATTTGGGGTTCGAGGTCATGGAAGACT 720
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 652 CACGTGACATGGCTCGTAAACTCGGCATGCCATATTTGGGGTTCAAGGTCGTGGAATACT 711
Query 721 AAAGACACATCTCGTAACGTTTGGTGGCTAAGCTTATTTACAATGGGAGAGAGTTGGCAT 780
||||||||||||||||||||||||||| |||| || ||||| |||||||| ||||||||
Sbjct 712 AAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGTTTACGATGGGAGAAAGTTGGCAC 771
Query 781 AATAATCACCACGCGTTTGAGTCATCAGCGAGGCAAGGATTGGAGTGGTGGCAAATAGAT 840
|| || || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 772 AACAACCATCACGCGTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGATAGAC 831
Query 841 ATCACTTGGTATCTCATTCGACTATTTGAGGTTCTCGG-ATTAGCCACTGATGTGAAATT 899
|| |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 832 ATAACTTGGTACCTCATTCGACTATTTGAGGTTCTCGGTAT-AGCCACTGATGTGAAATT 890
Query 900 GCCCTCGGAATTTCAGAAACGGAA-ATTGGCTCT-GATTCGTT 940
|||||||||| | ||||||| || || |||||| | ||||||
Sbjct 891 GCCCTCGGAACTCCAGAAACAAAAGAT-GGCTCTCG-TTCGTT 931
> AT1G06100.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1851530-1853019 FORWARD LENGTH=900
Length=900
Score = 638 bits (345), Expect = 0.0
Identities = 635/772 (82%), Gaps = 32/772 (4%)
Strand=Plus/Plus
Query 175 TTGTGTCTCTTGGCACCGTTTAACTACAAATGGGAAGC-TCTACGGTTCGGTTTTGTGCT 233
|||||||| ||||| || |||||||||||||||||||| | | ||||||||| | | |
Sbjct 133 TTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCAT-TCCGGTTCGGTATAAT--T 189
Query 234 CTACG-CAT--TGACTTCA-CTCAGCATTACATTCTCATACCATAGGAACTTGGCTCACC 289
|| || ||| |||| | ||| ||||||||||||| ||||||||||||||| ||||||
Sbjct 190 CT-CGCCATACTGAC-AAACCTCTGCATTACATTCTCGTACCATAGGAACTTGACTCACC 247
Query 290 GGAGCTTCAAGCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCTGTTTTTGCTC 349
||||||| ||||| |||||||||||||||||||| || ||||||| |||| |||| || |
Sbjct 248 GGAGCTTTAAGCTACCGAAATGGCTTGAATATCCATTCGCTTATTCTGCTCTTTTGGCAC 307
Query 350 TTCAGGGTGATCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACTGATT 409
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 308 TTCAGGGTGATCCATTGGATTGGGTGAGCATACATAGATTCCATCACCAGTTCACAGATT 367
Query 410 CTGACCGTGACCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTGTGGTGGATAT 469
|||||||||| |||||||||||||| |||||||| |||||||||||||| | ||||||||
Sbjct 368 CTGACCGTGATCCACATAGCCCTATAGAAGGATTCTGGTTCAGTCATGTTTTGTGGATAT 427
Query 470 GTGACACTCG-TTATATCAAATATAAGTGTGGAGGACGTAACAACGTGATGGACTTGAAG 528
|||||| || |||||||| | | ||||||||| ||||||||||||||||||||||||||
Sbjct 428 TTGACAC-CGATTATATCAGAGAAAAGTGTGGAAGACGTAACAACGTGATGGACTTGAAG 486
Query 529 CAACAATGGTTCTACAGGTTTCTACGAATGACAATTGGTT-TCCACGTCTTAATGTTTTG 587
|||||||||||||| ||||||||| || ||| |||||| ||||| ||||| |||||
Sbjct 487 CAACAATGGTTCTATAGGTTTCTAAAAAAGACG-TTGGTTCTCCACATCTTAGCATTTTG 545
Query 588 GACTGTCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCGGCGG-GGGCGTTGG 644
||| || |||| || ||||| |||| |||||||||| || || | | | ||| ||||
Sbjct 546 GACCCTCATCTA-CT-TATGGGGTGGTCTACCTTACCTAACTTG-GACTGTGGGTTTTGG 602
Query 645 AGGTGTGATTGGGTACCACGTGACATGGCTCGTAAACTCGGCATGCCATATTTGGGGTTC 704
||| || ||||| ||||| | ||| ||||||||||| ||||||||||||||||| |||||
Sbjct 603 AGGAGTAATTGGTTACCATGGGACTTGGCTCGTAAATTCGGCATGCCATATTTGTGGTTC 662
Query 705 G-AGGTCATGG-AAGACTAAAGACACATCTCGTAACGTTTGGTGGCTAA-GCTTATTTAC 761
| | | | ||| || || || ||||| || |||||||||||||||||| ||| ||| ||
Sbjct 663 GCAAG-CGTGGCAA-ACCAATGACACCTCACGTAACGTTTGGTGGCTAGCGCT-ATTGAC 719
Query 762 AATGGGAGAGAGTTGGCATAATAATCACCACGCGTTTGAGTCATCAGCGAGGCAAGGATT 821
||||||||||| ||||| || || ||||| || |||||| | || || ||||| ||| |
Sbjct 720 TATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGACGTCGGCTAGGCACGGACT 779
Query 822 GGAGTGGTGGCAAATAGATATCACTTGGTATCTCATTCGACTATTTGAGGTTCTCGGATT 881
|| |||| || |||| || |||||||| |||||| | | || ||| |||||| ||
Sbjct 780 AGAATGGTATCAGTTAGACATAACTTGGTACCTCATTTGGTTCTTCCAGGCTCTCGGTTT 839
Query 882 AGCCACTGATGTGAAATTGCCCT-CGGAATT-TCAGAAACGGAA-ATTGGCT 930
|||||| |||| ||||| || | | || | ||||||||| || || ||||
Sbjct 840 AGCCACCAATGTCAAATTACC-TACCGA-TGCTCAGAAACGCAAGAT-GGCT 888
> AT1G06090.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1847883-1849693 FORWARD LENGTH=1131
Length=1131
Score = 623 bits (337), Expect = 1e-177
Identities = 638/781 (82%), Gaps = 30/781 (4%)
Strand=Plus/Plus
Query 165 TGTGCACT-TTTTGTGTCTCTTGGCACCGTTTAACTACAAATGGGAAGCTCTACGGTTCG 223
|||||| | | |||||||| ||||| ||||||||||| |||||||||||||| |||||||
Sbjct 161 TGTGCA-TCTATTGTGTCTGTTGGCTCCGTTTAACTATAAATGGGAAGCTCTCCGGTTCG 219
Query 224 GTTTTGTG-CTCTACGC-AT--TGACTTCACTCAGCATTACATTCTCATACCATAGGAAC 279
| |||| ||| ||| || ||||| || ||||||||||| |||||||||||||||
Sbjct 220 G---TGTGATTCT-CGCTATAGTGACTAGTCTTAGCATTACATTTTCATACCATAGGAAC 275
Query 280 TTGGCTCACCGGAGCTTCAAGCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCT 339
||| ||||| |||||| |||||||| ||||||||||||||||| || ||||| | |||
Sbjct 276 TTGACTCACAAGAGCTTTAAGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCC 335
Query 340 GTTTTTGCTCTTCAGGGTGATCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAG 399
|||| || ||||||||| |||| | ||||||||||| | |||||||||||||||||||
Sbjct 336 CTTTTCGCGCTTCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAG 395
Query 400 TTCACTGATTCTGACCGTGACCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTG 459
||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 396 TTCACAGATTCAGACCGTGACCCACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTC 455
Query 460 TGGTGGATATGT-GACACTC-GTTATATCAAATATAAGTGTGGAGGACGTAACAACGTGA 517
| ||||||| | ||||| | |||| |||| | | ||||| ||||||||| |||||||||
Sbjct 456 TTTTGGATAT-TCGACAC-CAGTTACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGA 513
Query 518 TGGACTTGAAGCAACAATGGTTCTACAGGTTTCTACGAATGACAATTGGTTTCCACGTCT 577
||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||| |||
Sbjct 514 TGGACTTGAAGCAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGGTCTCCACATCT 573
Query 578 TAATGTTTTGGACTGTCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCGGCGG 635
||| |||||||| || ||||| | ||||| |||| |||||||||| || |||||||
Sbjct 574 TAACATTTTGGACCCTCGTCTAT-T-TATGGGGTGGTCTACCTTACCTAACTTGCGGCGT 631
Query 636 GGGCGTTGGAGGTGTGATTGGGTACCACGTGACATGGCTCGTAAACTCGGCATGCCATAT 695
||| |||||||| || || ||| | | ||| |||||| |||||||||||||||||||
Sbjct 632 GGGTGTTGGAGGAACAATCGGTTACAATGGGACTTGGCTCATAAACTCGGCATGCCATAT 691
Query 696 TTGGGGTTCGAG-GTCATGGAAGACTAAAGACACATCTCGTAACGTTTGGTGGCTAAG-C 753
|||||||||| | | ||||||| ||||| ||||| ||||||||| ||||||||||| | |
Sbjct 692 TTGGGGTTCGCGAG-CATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGC 750
Query 754 TTATTTACAATGGGAGAGAGTTGGCATAATAATCACCACGCGTTTGAGTCATCAGCGAGG 813
||| || ||||||||||| ||||| || || ||||| || |||||| | || || |||
Sbjct 751 C-ATTCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCCTCGGCCAGG 809
Query 814 CAAGGATTGGAGTGGTGGCAAATAGA-TATCACTTGGTATCTCATTCGACTATTTGAGGT 872
|| ||| |||| |||| || |||| | | |||||||| |||||| | | || | |
Sbjct 810 CACGGACTGGAATGGTATCAGGTAGACT-TAACTTGGTACCTCATTTGTTTCTTCCAAGC 868
Query 873 TCTCGGATTAGCCACTGATGTGAAATTGCCCT-CGGAATT-TCAGAAA-CGGAAATTGGC 929
|||||| |||||||| ||||| |||||||| | | || | ||| ||| || ||||||||
Sbjct 869 TCTCGGTTTAGCCACGGATGTCAAATTGCC-TACCGA-TGCTCA-AAAGCGAAAATTGGC 925
Query 930 T 930
|
Sbjct 926 T 926
> AT1G06120.1 | Symbols: | Fatty acid desaturase family protein
| chr1:1855943-1857718 FORWARD LENGTH=1122
Length=1122
Score = 619 bits (335), Expect = 1e-176
Identities = 689/857 (80%), Gaps = 36/857 (4%)
Strand=Plus/Plus
Query 64 GATGGCTCTAGCCAAAG-AGGCGCCTTGAGTAAGGAAAAAAG-GCCG-T-ATATTCATAG 119
||| ||||||||||||| | || || ||||||||||||| | || | | |||| |
Sbjct 42 GATAGCTCTAGCCAAAGCA-AAGCAGTGCGTAAGGAAAAAAGAG-CGTTCCTTTTCA-GG 98
Query 120 AGAATGGTCGTGGGCTGATATAATAAGAGCGTT-AACCGTTATGGTTGTGCACT-TTTTG 177
| ||||| | ||| |||| |||| |||| || | ||| || |||||| | | |||
Sbjct 99 A-AATGGACCCGGGTTGATGTAATGAGAG-TTTCGGCTGTTGGGGCTGTGCA-TCTATTG 155
Query 178 TGTCTCTTGGCACCGTTTAACTACAAATGGGAAGCTCTACGGTTCGGTTTTGTGCTCTAC 237
||||| ||||| ||||||||||||| |||||||||| | ||||| | | | || ||
Sbjct 156 TGTCTATTGGCTCCGTTTAACTACACATGGGAAGCTTTCCGGTTTGCTGCTATGGTC--G 213
Query 238 GCAT-T-GACTTCA-CTCAGCATTACATTCTCATACCATAGGAACTTGGCTCACCGGAGC 294
| || | ||| | | |||||||||||||| |||||||||||||||||| ||||||| |||
Sbjct 214 GTATATCGAC-TAATCTCAGCATTACATTTTCATACCATAGGAACTTGACTCACCGAAGC 272
Query 295 TTCAAGCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCTGTTTTTGCTCTTCAG 354
|| |||||||| ||||||||||||||||| || ||||| | ||| |||| || ||||||
Sbjct 273 TTTAAGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTTCGCGCTTCAG 332
Query 355 GGTGATCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACTGATTCTGAC 414
||| |||| | ||||||||||| | |||||||||||||||||||||||| ||||| |||
Sbjct 333 GGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCACAGATTCGGAC 392
Query 415 CGTGACCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTGTGGTGGATATGT-GA 473
|||||||||||||| |||||||||||||||||||||||||| || | ||||||| | ||
Sbjct 393 CGTGACCCACATAGTCCTATCGAAGGATTTTGGTTCAGTCACGTCTTTTGGATAT-TCGA 451
Query 474 CACTC-GTTATATCAAATATAAGTGTGGAGGACGTAACAACGTGATGGACTTGAAGCAAC 532
||| | |||| |||| | | ||||||||||||||| ||||||||||||||||||||||||
Sbjct 452 CAC-CAGTTACATCAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGACTTGAAGCAAC 510
Query 533 AATGGTTCTACAGGTTTCTACGAATGACAATTGGTTTCCACGTCTTAATGTTTTGGA-CT 591
|||||||||| |||||||| | || ||||||||| ||||| |||||| ||||||| |
Sbjct 511 AATGGTTCTATAGGTTTCTTCAAAACACAATTGGTCTCCACATCTTAACATTTTGGATCC 570
Query 592 GTCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCG-GCGGGGGCGTTGGAGGT 648
|| ||||| | ||||| |||| |||||||||| || || | ||| ||| ||||||||
Sbjct 571 -TCGTCTAT-T-TATGGGGTGGTCTACCTTACCTAACTTG-GAGCGTGGGTGTTGGAGGA 626
Query 649 GTGATTGGGTACCACGTGACATGGCTCGTAAACTCGGCATGCCATATTTGGGGTTCGAG- 707
| || || ||||| | ||| |||||| ||||||||||||||||||||||||||||| |
Sbjct 627 GCAATCGGTTACCATGCGACTTGGCTCATAAACTCGGCATGCCATATTTGGGGTTCGCGA 686
Query 708 GTCATGGAAGACTAAAGACACATCTCGTAACGTTTGGTGGCTAAG-CTTATTTACAATGG 766
| ||||||| ||||| ||||| ||||||||| ||||||||||| | | ||| || ||||
Sbjct 687 G-CATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCC-ATTCACGATGG 744
Query 767 GAGAGAGTTGGCATAATAATCACCACGCGTTTGAGTCATCAGCGAGGCAAGGATTGGAGT 826
||||||| ||||| || || ||||| || |||||| | || || ||||| || |||| |
Sbjct 745 GAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCACGGGCTGGAAT 804
Query 827 GGTGGCAAATAGA-TATCACTTGGTATCTCATTCGACTATTTGAGGTTCTCGGATTAGCC 885
||| || |||| | | || ||||| |||||| | | || |||||||||| ||||||
Sbjct 805 GGTATCAGGTAGACT-TAACGTGGTACCTCATTTGGTTCTTCCAGGTTCTCGGTTTAGCC 863
Query 886 ACTGATGTGAAATTGCC 902
|| ||||| ||||||||
Sbjct 864 ACAGATGTCAAATTGCC 880
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48174546973
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5