BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470656
Length=1604
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06390.1 | Symbols: GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-... 2545 0.0
AT2G30980.1 | Symbols: ASKdZeta, ATSK23, BIL1, ATSK2-2, SKdZeta... 1478 0.0
AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase 11... 375 5e-103
> AT1G06390.1 | Symbols: GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-3
| GSK3/SHAGGY-like protein kinase 1 | chr1:1946788-1950755
FORWARD LENGTH=1634
Length=1634
Score = 2545 bits (1378), Expect = 0.0
Identities = 1535/1608 (95%), Gaps = 21/1608 (1%)
Strand=Plus/Plus
Query 1 ATTGTTCAGTGGTTGAGAGAGAAAAGAGTAAAAAAGCACATGGCCTCATTACCATTGGGG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34 ATTGTTCAGTGGTTGAGAGAGAAAAGAGTAAAAAAGCACATGGCCTCATTACCATTGGGG 93
Query 61 CCTCCGCCTCATGCTCTTGCTCCACCTCCGCCGCAGCCGCAGCTTCACGACGGCGACGCT 120
|||| |||||||||||||| ||||| | | || ||||||||||||||||||||||
Sbjct 94 CCTCAGCCTCATGCTCTTG------CTCCG-C-C-GCTGCAGCTTCACGACGGCGACGCT 144
Query 121 TTGAAACGCCGTCCTGAAATGGATTCTGATAAGGAAATGTCTGCTGCTGTTATTGAGGGA 180
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 145 TTGAAACGCCGTCCTGAATTGGATTCTGATAAGGAAATGTCTGCAGCTGTTATTGAGGGA 204
Query 181 AATGATGCTGTTACCGGTCATATCATTTCCACTACCATTGGGGGCAAAAATGGTGAACCG 240
||||| |||||||| |||||||||||||||||||| ||||| |||||||| || |||||
Sbjct 205 AATGACGCTGTTACTGGTCATATCATTTCCACTACTATTGGAGGCAAAAACGGCGAACCA 264
Query 241 AAGCAGACCATTAGTTACATGGCTGAGCGGGTTGTTGGAACAGGTTCATTCGGAATTGTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 265 AAGCAGACCATTAGTTACATGGCTGAGCGGGTTGTTGGAACAGGTTCATTCGGGATTGTT 324
Query 301 TTCCAGGCGAAATGCTTGGAAACTGGAGAATCAGTAGCCATTAAAAAGGTCTTGCAAGAT 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 TTTCAGGCGAAATGCTTGGAAACTGGAGAATCAGTAGCCATTAAAAAGGTCTTGCAAGAT 384
Query 361 CGACGCTACAAAAACCGTGAGTTGCAACTAATGCGACCAATGGATCACCCAAATGTCATC 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 385 CGACGCTATAAAAACCGTGAGTTGCAACTAATGCGACCAATGGATCACCCAAATGTCATC 444
Query 421 TCCTTGAAGCATTGTTTCTTCTCTACAACAAGTAGAGATGAGCTCTTCCTCAACCTTGTT 480
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 445 TCCTTGAAGCACTGTTTCTTCTCTACAACGAGTAGAGATGAGCTCTTCCTCAACCTTGTT 504
Query 481 ATGGAGTATGTACCTGAGACTTTGTACCGGGTTTTGAGGCACTATACTAGTTCAAATCAG 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 505 ATGGAGTATGTACCTGAGACTTTATACCGGGTTTTGAGGCACTATACTAGTTCTAATCAG 564
Query 541 AGGATGCCAATTTTCTATGTCAAACTTTACACATATCAAATCTTTAGAGGTTTGGCTTAC 600
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 565 AGGATGCCAATTTTCTATGTCAAGCTTTACACATATCAAATCTTTAGAGGTTTGGCTTAC 624
Query 601 ATCCATACTGTTCCCGGTGTTTGCCACAGAGATGTGAAACCACAAAATCTGTTGGTTGAT 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 625 ATCCATACTGTTCCCGGTGTTTGCCACAGAGATGTGAAACCACAAAATCTCTTGGTTGAT 684
Query 661 CCCTTGACCCATCAGGTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTATTGGTCAAAGGT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 CCCTTGACCCATCAGGTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTATTGGTCAAAGGT 744
Query 721 GAAGCAAACATATCATATATCTGCTCCCGTTATTATCGAGCTCCAGAACTCATCTTTGGC 780
||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 745 GAACCAAACATATCATATATCTGCTCCCGTTATTATCGTGCTCCAGAACTGATCTTTGGC 804
Query 781 GCCACAGAGTATACAGCATCCATAGATATATGGTCCGCTGGTTGTGTTCTGGCAGAGCTT 840
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 805 GCCACAGAGTATACAGCATCCATAGATATATGGTCTGCTGGTTGTGTACTGGCAGAGCTT 864
Query 841 CTTCTTGGCCAGCCGTTATTTCCAGGAGAAAATTCAGTTGATCAGCTTGTGGAGATCATA 900
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 865 CTTCTGGGCCAGCCGTTATTTCCAGGAGAAAATTCAGTTGATCAGCTTGTGGAGATCATA 924
Query 901 AAGGTTCTTGGTACTCCAACTCGTGAAGAAATTCGATGTATGAACCCAAACTACACAGAC 960
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 925 AAGGTTCTTGGTACTCCAACTCGTGAAGAAATTCGATGTATGAACCCGAACTACACAGAT 984
Query 961 TTTAGGTTCCCACAAATCAAAGCTCACCCTTGGTACAAGGTTTTTCATAAGCGGATGCCT 1020
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 985 TTTAGGTTCCCACAAATCAAAGCTCACCCTTGGCACAAGGTTTTTCATAAACGGATGCCT 1044
Query 1021 CCAGAAGCCATTGACCTTGCATCTCGGCTTCTTCAATATTCACCAAGCCTACGCTGCACT 1080
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1045 CCAGAAGCAATAGACCTTGCATCTCGGCTTCTTCAATATTCACCAAGTCTACGCTGCACT 1104
Query 1081 GCGCTCGAAGCATGTGCCCATCCGTTTTTCAATGAACTCCGAGAGCCAAACGCCCGTCTT 1140
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 GCGCTCGAAGCATGTGCTCATCCGTTTTTCAATGAACTCCGAGAGCCAAACGCCCGTCTT 1164
Query 1141 CCAAATGGTCGTCCATTACCGCCACTGTTCAATTTCAAACAAGAGTTAGGTGGAGCTTCA 1200
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1165 CCAAATGGTCGTCCATTACCGCCATTGTTCAATTTCAAACAAGAGTTAGGTGGAGCTTCA 1224
Query 1201 GTGGAGCTAATAAACAGGCTAATACCTGAGCATGTGAGACGACAGATGAGCACAGGATTA 1260
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1225 ATGGAGCTAATCAACAGGCTAATACCTGAGCATGTGAGACGACAAATGAGCACAGGATTA 1284
Query 1261 CAAAACAGTTAAAAACTGTGCATGTCTGAAGAAAAAGAGGAGAAA-GCAGATTTACTACT 1319
|||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct 1285 CAAAACAGTTAAAAACTGTGCATGTCTGAAGAGAAAGAGGAGAAAAGCAGGTTTACTACT 1344
Query 1320 TCTATTTGATAGTTGACAGGTTCAACAATATATTAACCACGACTATTATCAGCTTCTATA 1379
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1345 TTTATTTGATAGTTGACAGGTTCAACAGTATATTAACCACGACTATTATCAGCTTCTATA 1404
Query 1380 CCCGTAGTAAAGTCATTTTCAGCTTTT-GAGAAATCAGATGCTGATAATTGC-TTCTAtt 1437
|||||||||||||||| |||||||||| |||||||||||||||||||||||| || | ||
Sbjct 1405 CCCGTAGTAAAGTCATATTCAGCTTTTTGAGAAATCAGATGCTGATAATTGCGTTTT-TT 1463
Query 1438 ttttttttATTCCTTAGCTTGGAGAGTGGAGAGAGAGACACTGTTCCTCGTGTATTTTCT 1497
||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct 1464 TTTTTTTTATTCCGTAGCCTGGAGAGTGGAGAGAGA--CACTGTTCCTCGTGTATTTT-T 1520
Query 1498 GTATATGTTTTTGTCCGTAAAACAATTCTGACAGATCCGTAGAGAAAAGaaaaaaaaaaC 1557
||||||||||||||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 1521 GTATATGTTTTTGTCTGTAAAACAATTCTGACAGATACGTAGAGACAA-AAGAAAAA--C 1577
Query 1558 GAGGTGATAATATTGAACCATGTCATGTCCAAAAG-TTAATCTACAGA 1604
|||||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct 1578 GAGGTGATAATATTAAACCATGTCATGTCCAAAAGATTAG-CTACAGA 1624
> AT2G30980.1 | Symbols: ASKdZeta, ATSK23, BIL1, ATSK2-2, SKdZeta
| SHAGGY-related protein kinase dZeta | chr2:13182069-13185949
REVERSE LENGTH=1599
Length=1599
Score = 1478 bits (800), Expect = 0.0
Identities = 1100/1245 (88%), Gaps = 20/1245 (2%)
Strand=Plus/Plus
Query 15 GAGAGAGAA--AAGAG-TAAAAAAGCACATGGCCTC-ATTACCATTGGGGCCTCCGCCTC 70
||||||||| |||| | ||||||||||| | || | |||||||||||||| ||||
Sbjct 52 GAGAGAGAAGTTAGAGCTGTAAAAGCACATGACTTCGA-TACCATTGGGGCCT---CCTC 107
Query 71 ATG-CT-CTTGCTCCACCTCCGCCGCAGCCGCAGCTTCACGACGGCGACGCTTTGAAACG 128
| | || | | || | |||| | || |||||| ||||||| ||| || ||||||||||
Sbjct 108 A-GCCTCCGT-CTTTAGCTCCTCAGCCGCCGCATCTTCACGGCGGAGATTCTTTGAAACG 165
Query 129 CCGTCCTGAAATGGA-TTCTGATAAGGAAATGTCTGCTGCTGTTATTGAGGGAAATGATG 187
||||| || || || | || ||||||||||||||||||||||| || ||||||||||
Sbjct 166 TCGTCCCGATATAGACAAC-GACAAGGAAATGTCTGCTGCTGTTATAGAAGGAAATGATG 224
Query 188 CTGTTACCGGTCATATCATTTCCACTACCATTGGGGGCAAAAATGGTGAACCGAAGCAGA 247
||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||
Sbjct 225 CTGTTACCGGTCACATAATTTCTACTACAATTGGAGGCAAAAATGGTGAACCTAAACAGA 284
Query 248 CCATTAGTTACATGGCTGAGCGGGTTGTTGGAACAGGTTCATTCGGAATTGTTTTCCAGG 307
|||||||||||||||| || || |||||||||||||| |||||||||||||| |||||||
Sbjct 285 CCATTAGTTACATGGCCGAACGTGTTGTTGGAACAGGATCATTCGGAATTGTATTCCAGG 344
Query 308 CGAAATGCTTGGAAACTGGAGAATCAGTAGCCATTAAAAAGGTCTTGCAAGATCGACGCT 367
| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |
Sbjct 345 CAAAATGCTTGGAAACTGGAGAATCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGTT 404
Query 368 ACAAAAACCGTGAGTTGCAACTAATGCGACCAATGGATCACCCAAATGTCATCTCCTTGA 427
| |||||||| ||||||||| ||||||||| |||||| || |||||||| | |||||||
Sbjct 405 ATAAAAACCGAGAGTTGCAATTAATGCGACTAATGGACCATCCAAATGTGGTTTCCTTGA 464
Query 428 AGCATTGTTTCTTCTCTACAACAAGTAGAGATGAGCTCTTCCTCAACCTTGTTATGGAGT 487
|||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||
Sbjct 465 AGCATTGTTTCTTCTCTACAACGACTAGAGATGAGCTCTTCCTCAATCTCGTTATGGAGT 524
Query 488 ATGTACCTGAGACTTTGTACCGGGTTTTGAGGCACTATACTAGTTCAAATCAGAGGATGC 547
||||||| ||||| |||||||||||||||| |||||||||||||||||| ||| ||||||
Sbjct 525 ATGTACCAGAGACATTGTACCGGGTTTTGAAGCACTATACTAGTTCAAACCAGCGGATGC 584
Query 548 CAATTTTCTATGTCAAACTTTACACATATCAAATCTTTAGAGGTTTGGCTTACATCCATA 607
| || ||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||
Sbjct 585 CTATCTTCTATGTCAAACTTTACACATACCAAATCTTCAGAGGCTTGGCTTATATCCATA 644
Query 608 CTGTTCCCGGTGTTTGCCACAGAGATGTGAAACCACAAAATCTGTTGGTTGATCCCTTGA 667
||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||| | |
Sbjct 645 CTGCTCCTGGTGTCTGCCACAGAGATGTGAAACCACAAAATCTTTTGGTTGATCCCCTCA 704
Query 668 CCCATCAG-GTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTATTGGTCAAAGGTGAAGCA 726
|||||||| || ||||| |||||||||||||||||||||||| |||| ||||||||||||
Sbjct 705 CCCATCAGTGT-AAGCTCTGTGATTTTGGAAGTGCAAAAGTACTGGTGAAAGGTGAAGCA 763
Query 727 AACATATCATATATCTGCTCCCGTTATTATCGAGCTCCAGAACTCATCTTTGGCGCCACA 786
|||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||
Sbjct 764 AACATATCATATATCTGCTCTCGGTATTACCGAGCTCCAGAACTCATCTTTGGTGCCACA 823
Query 787 GAGTATACAGCATCCATAGATATATGGTCCGCTGGTTGTGTTCTGGCAGAGCTTCTTCTT 846
||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 824 GAGTATACATCATCCATTGATATATGGTCTGCTGGTTGTGTTCTGGCAGAGCTACTTCTT 883
Query 847 GGCCAGCCGTTATTTCCAGGAGAAAATTCAGTTGATCAGCTTGTGGAGATCATAAAGGTT 906
|| ||||||||||| || ||||||||||| || || ||||| ||||||||||||||||||
Sbjct 884 GGGCAGCCGTTATTCCCGGGAGAAAATTCTGTGGACCAGCTAGTGGAGATCATAAAGGTT 943
Query 907 CTTGGTACTCCAACTCGTGAAGAAATTCGATGTATGAACCCAAACTACACAGACTTTAGG 966
||||||||||||||||| |||||||| || || ||||||||||||||||||||||| ||
Sbjct 944 CTTGGTACTCCAACTCGCGAAGAAATCCGGTGCATGAACCCAAACTACACAGACTTCAGA 1003
Query 967 TTCCCACAAATCAAAGCTCACCCTTGGTACAAGGTTTTTCATAAGCGGATGCCTCCAGAA 1026
||||||||||||||||| ||||||||| | |||||||| || |||||||||||||| |||
Sbjct 1004 TTCCCACAAATCAAAGCCCACCCTTGGCATAAGGTTTTCCACAAGCGGATGCCTCCGGAA 1063
Query 1027 GCCATTGACCTTGCATCTCGGCTTCTTCAATATTCACCAAGCCTACGCTGCACTGCGCTC 1086
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 1064 GCCATTGACCTTGCATCTCGGCTTCTTCAATACTCACCAAGTCTACGTTGCACTGCGCTC 1123
Query 1087 GAAGCATGTGCCCATCCGTTTTTCAATGAACTCCGAGAGCCAAACGCCCGTCTTCCAAAT 1146
|| |||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 1124 GAGGCATGTGCGCATCCGTTTTTCAATGAACTCCGTGAGCCAAATGCTCGTCTTCCAAAT 1183
Query 1147 GGTCGTCCAT-TACCGCCACTGTTCAATTTCAAACAAGAGTTAGG-TGGAGCTTCAGTGG 1204
|| || || | |||| || ||||||| |||||||||||||| | ||| |||||| ||
Sbjct 1184 GGCCGACC-TCTACCACCGTTGTTCAACTTCAAACAAGAGTT-GTCTGGGGCTTCACCGG 1241
Query 1205 AGCTAATAAACAGGCTAATACCTGAGCATGTGAGACGACAGATGA 1249
|||| || |||||||||||||| ||||||||||| ||||||||||
Sbjct 1242 AGCTTATCAACAGGCTAATACCAGAGCATGTGAGGCGACAGATGA 1286
> AT5G26751.1 | Symbols: ATSK11, SK 11 | shaggy-related kinase
11 | chr5:9399377-9402476 REVERSE LENGTH=1666
Length=1666
Score = 375 bits (203), Expect = 5e-103
Identities = 753/1012 (74%), Gaps = 64/1012 (6%)
Strand=Plus/Plus
Query 199 CATATCATT-TCCACTACCATTGGGGGCAAAAATGGTGAACCGAAGCAGACCATTAGTTA 257
||||||||| | ||||| ||||| || | |||||| |||| || ||||| ||||| ||
Sbjct 391 CATATCATTGT-GACTACTATTGGTGGTAGAAATGGCCAACCAAAACAGACAATTAGCTA 449
Query 258 CATGGCTGAGCGGGTTGTTGGAACA-GGTTCATTCGGAATTGTTTTCCAGGCGAAATG-C 315
|||||||||||| |||||||| || || || || || |||| ||||| |||||||| |
Sbjct 450 CATGGCTGAGCGTGTTGTTGG-TCACGGATCTTTTGGTGTTGTGTTCCAAGCGAAATGTC 508
Query 316 TTGGAAACTGGAGAATCAGTAGCCATTAAA-AAGGTCTTGCAAGAT-CGACGCTACAAAA 373
|| || || |||||| | || || | |||| || || || |||||| || | ||||| |
Sbjct 509 TT-GAGACAGGAGAAACTGTTGCGA-TAAAGAAAGTTTTACAAGATAGGA-GGTACAAGA 565
Query 374 ACCGTGAG-TTGC-AACTAATGCGACCAATGGATCACCCAAATGTCATCTCCT-TGAAGC 430
|||||||| || | ||| ||| | | | | || || || ||||| | | || |||| |
Sbjct 566 ACCGTGAGCTT-CAAAC-CATGAGGCTACTTGACCATCCTAATGTTGTGT-CTCTGAAAC 622
Query 431 ATTGTTTCTTCTCTACAACAAG-TAGAGATGAGCTCTT-CCTCAACCTTGTTATGGAGTA 488
||||||||||||| || || | | ||||||||| || |||||| |||||| | |||||
Sbjct 623 ATTGTTTCTTCTCAACCAC-TGAAAAAGATGAGCT-TTACCTCAATCTTGTTCTTGAGTA 680
Query 489 TGTACCTGAGACT-TTGTACCGGGTTTTGAGGCACTA-TACTAGTTCAAATCAGAGGATG 546
|| || || ||| || | || ||| | | ||||| || | | |||||||| |||
Sbjct 681 CGTTCCAGAAACTGTT-CATCGTGTTATCAAACACTACAACAAACT-GAATCAGAGAATG 738
Query 547 CCAATTTTCTATGTCAAACTTTACACATATCAAATCTTTAGAGGTTTGGCTTACATCCAT 606
|| || | || |||||||||||||| ||||| || ||||||| || ||||||| |
Sbjct 739 CCTCTTATATACGTCAAACTTTACACTTATCAGATTTTTAGAGCCTTATCTTACATTC-- 796
Query 607 ACTG-TTC-CCGGTGTTTGCCA-CAGAGATGTGAAACCACAAAATC-TGTTGGTTGATCC 662
|| | | | ||||| || || | | || | ||||| ||||| | ||||||| ||||
Sbjct 797 ACCGATGCATTGGTGTGTGTCATC-GTGACATAAAACCTCAAAA-CTTGTTGGTAAATCC 854
Query 663 -CTTGACCCATCAGGTTAAGCTGTGTGATTTTGGAAGTGCAAAAGTATTGGTCAAAGGTG 721
| || ||||| || ||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct 855 GC-ACACTCATCAAGTAAAGCTATGTGATTTTGGAAGTGCAAAAGTATTGGTAAAAGGAG 913
Query 722 AAGCAAACATATCATATATCTGCTCCCGTTATTATC-GAGCTCCAGAACTCATCTTTGGC 780
|| ||||||| || || |||||||| | ||||| | |||| || ||||| || |||||
Sbjct 914 AACCAAACATTTCCTACATCTGCTCGAGGTATTA-CAGAGCACCTGAACTTATTTTTGGA 972
Query 781 GCCACAGAGTATAC-AGCATCCATAGATATATGGTCCGCTGGTTGTGTTCTGGCAGAGCT 839
|| || |||||||| | || |||| ||| | ||||| || || |||||||| || || ||
Sbjct 973 GCAACCGAGTATACGA-CAGCCATTGATGTCTGGTCTGCAGGATGTGTTCTAGCTGAACT 1031
Query 840 TCTT-CTTGGCCAGCCGTTATTTCCAGGAGAAAATTCAGTTGATCAGCTTGTGGAGATCA 898
|| ||||| ||||| || || || || || | |||||||| ||||| ||||| |
Sbjct 1032 A-TTGCTTGGACAGCCCTTGTTCCCTGGTGAGAGCGGTGTTGATCAACTTGTAGAGATTA 1090
Query 899 TAAAGGTTCTTGGTA-CTCCAACTCGTGAAGAAATTCGA-TGTATGAACCCAAACTACAC 956
| ||||| ||||| | | || ||| | |||||||| | | || |||||||||||||||||
Sbjct 1091 TCAAGGT-CTTGGGAACGCCTACTAGAGAAGAAAT-CAAGTGCATGAACCCAAACTACAC 1148
Query 957 AGACTTTAGGTTCCCACAAATCAAAGCTCACCCTTGGTACAAGGTTTTTCATAAGCGGAT 1016
|| || | ||||| || || |||||||| || ||| ||||| |||| || || || ||
Sbjct 1149 GGAATTCAAATTCCCTCAGATTAAAGCTCATCCATGGCACAAGATTTTCCACAAACGCAT 1208
Query 1017 GCCTCCAGAAGCCATTGACCTTGCATCTCG-G-CTTCTTCAATATTCACC-AAGCCTACG 1073
|||||||||||| |||| ||| |||| | ||||||||||| || || || | ||||
Sbjct 1209 GCCTCCAGAAGCTGTTGAT-TTGG-TCTCAAGACTTCTTCAATACTCTCCTAATC-TACG 1265
Query 1074 C--TGCACTGCGCTCGA-AGCATGT-GCCCATCCGTT-TTTCAATGAACTCCGAGAGCCA 1128
||| | || ||||| | ||| | | ||| || || ||| | ||| | |||| |||
Sbjct 1266 AAGTGC-C-GCTCTCGACA-CAT-TAGTCCACCCATTCTTTGA-TGAGTTAAGAGACCCA 1320
Query 1129 AACGCCCGTCTTCCAAATGGTCGT--CCATTACCGCCACTGTTCAATTTCAA 1178
||||| ||||| || ||||| ||| || || || || || ||||| |||||
Sbjct 1321 AACGCACGTCTACCTAATGGACGTTTCC-TT-CCACCGCTTTTCAACTTCAA 1370
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79216460010
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5