BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470701
Length=2120
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06780.2 | Symbols: GAUT6 | galacturonosyltransferase 6 | ch... 2745 0.0
AT2G30575.1 | Symbols: GAUT5, LGT5 | los glycosyltransferase 5 ... 1166 0.0
> AT1G06780.2 | Symbols: GAUT6 | galacturonosyltransferase 6 |
chr1:2083311-2087131 FORWARD LENGTH=2465
Length=2465
Score = 2745 bits (1486), Expect = 0.0
Identities = 1675/1763 (95%), Gaps = 26/1763 (1%)
Strand=Plus/Plus
Query 365 GTCGTAGGGAATTCATTGAAGAGTTATCCAAAATTAGATTCAAGACAAATGACCTTAGAC 424
||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 530 GTCGTAGAGAATTTATTGAAGAGTTATCCAAAATTAGATTCACGACAAATGACCTTAGAC 589
Query 425 TTAGCGCTATTGAACATGAGGATGGAGAAGGCTTGAAGGGGCCAAGGCTCATGCTCTTCA 484
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 590 TTAGCGCTATTGAACATGAGGATGGAGAAGGCTTGAAGGGGCCAAGGCTCATTCTCTTCA 649
Query 485 AGGATGGGGACTTTAATTCTCTAGTACGGGATAATTCGTCTGATCAAAGTGATGGTGGTA 544
|||||||||| ||||| | || || | | | ||| |||||||||||||||
Sbjct 650 AGGATGGGGAGTTTAA-T-TC--GT-C--------T-G-CTG---AAAGTGATGGTGGTA 691
Query 545 ATAATCACAAAAACAGGGAAGAACAAGTGATAGTTTCACAGAAGATGACAGTTAGCTCTG 604
||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 692 ATACTTACAAAAACAGGGAAGAACAAGTGATTGTTTCACAGAAGATGACAGTTAGCTCTG 751
Query 605 ATGAAAAGGGTCAAATTCTACCAACAGTCAACCAACTTGCTAATAAAACGGATTTCAAGC 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 ATGAAAAGGGTCAAATTCTACCAACAGTCAACCAACTTGCTAATAAAACGGATTTCAAGC 811
Query 665 CCCCTTTATCTAAGGGTGAAAAGAACACAAGGGTTCAGCCCAATAGAGCAACAGATGTGA 724
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 812 CCCCTTTATCTAAGGGTGAAAAGAACACAAGGGTTCAGCCCGACAGAGCAACAGATGTGA 871
Query 725 AAATAAAGGAGATCAGAGACAAAATTATTCAAGCTAAAGCCTACCTGAATTTCGCTCTAC 784
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 872 AAACGAAGGAGATCAGAGACAAAATTATTCAAGCTAAAGCCTACCTGAATTTCGCTCCAC 931
Query 785 CCGGAAGTAACTCTCAAATTGTGAGGGACTTGAGAGGTCGGAC-GAAAGAGCTGGAACGG 843
| ||||||||||||||| |||||| ||| |||||||||||| | ||||||||||||||||
Sbjct 932 CTGGAAGTAACTCTCAAGTTGTGAAGGAGTTGAGAGGTCGG-CTGAAAGAGCTGGAACGG 990
Query 844 TCTGTTGGGGATGCAACAAAGGATAAGGACTTATCAAAGGGCGCTCTTCGCAGGGTGAAG 903
|||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 991 TCTGTTGGTGATGCAACAAAGGACAAGGACTTATCAAAGGGCGCTCTCCGCAGGGTGAAG 1050
Query 904 CCCATGGAAAATGTGTTATACAAGGCTAGTCGTGTCTTTAACAATTGCCCTGCCATTGCT 963
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1051 CCCATGGAAAATGTGTTATATAAGGCTAGTCGTGTCTTTAACAATTGCCCTGCCATCGCT 1110
Query 964 ACCAAACTCCGTGCCATGAATTATAACACAGAAGAACAAGTTCAGGCGCAGAAAAATCAA 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCAAACTCCGTGCCATGAATTATAACACAGAAGAACAAGTTCAGGCGCAGAAAAATCAA 1170
Query 1024 GCAGCATATCTAATGCAGCTTGCAGCAAGGACCACCCCAAAAGGGCTTCACTGTCTCTCA 1083
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 GCAGCGTATCTAATGCAGCTTGCAGCAAGGACCACCCCAAAAGGGCTTCACTGTCTCTCA 1230
Query 1084 ATGCGGCTGACATCAGAATACTTCTCACTGGATCCTGAAAAAAGGCAGATGCCTAACCAG 1143
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1231 ATGCGGCTGACATCAGAATACTTTTCACTGGATCCTGAAAAAAGGCAGATGCCTAACCAG 1290
Query 1144 CAAAATTATTATGACCCTAATTTCAACCATTATGTTGTCTTCTCTGACAATGTTTTGGCT 1203
|||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1291 CAAAATTATTTTGACGCTAATTTCAATCATTATGTTGTCTTCTCTGACAATGTTTTGGCT 1350
Query 1204 TCTTCAGTTGTTGTTAACTCTACGATATCTTCTTCAAAGGAGCCGGAAAGAATAGTCTTC 1263
|||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1351 TCTTCAGTCGTTGTTAACTCTACGATATCTTCATCAAAGGAGCCAGAAAGAATAGTCTTC 1410
Query 1264 CATGTCGTGACTGATTCACTTAATTACCCAGCAATCTCAATGTGGTTTCTGCTAAATATT 1323
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1411 CATGTCGTGACTGATTCACTTAATTACCCAGCAATCTCAATGTGGTTTCTGCTAAACATT 1470
Query 1324 CAAAGTAGGGCTACCATCCAAATCCTCAACATTGATGATATGGATGTCCTACCTCCAGCT 1383
||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| || |
Sbjct 1471 CAAAGTAAAGCTACTATCCAAATCCTAAACATTGATGATATGGATGTCCTGCCTAGAGAT 1530
Query 1384 TATGATCAATTGCTGATGAAGCAAAACTCTAATGACCCAAGATTCATTTCTCCCCTCAAT 1443
||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1531 TATGATCAATTACTGATGAAGCAAAACTCTAATGACCCAAGATTCATTTCTACACTCAAT 1590
Query 1444 CACGCACGCTTCTATCTGCCGGATATATTCCCGGGTTTGAACAAGATCGTACTCTTTGAC 1503
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1591 CACGCACGCTTCTATCTCCCGGATATATTCCCGGGTTTGAACAAGATGGTACTCTTGGAC 1650
Query 1504 CATGATGTAGTAGTTCAAAGAGATTTAAGTAGACTGTGGAGTATTGATATGAAAGGAAAG 1563
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1651 CATGATGTAGTTGTTCAAAGAGATTTAAGTAGACTGTGGAGCATTGATATGAAAGGAAAG 1710
Query 1564 GTGGTTGGAGCTGTAGAGACTTGTCTTGAAGGTGAATCTTCATTTCGATCAATGAGCACA 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1711 GTGGTTGGAGCTGTAGAGACTTGTCTTGAAGGTGAATCTTCATTTCGATCAATGAGCACA 1770
Query 1624 TTTATTAATTTCTCAGACACATGGGTCGCTGGGAAATTTAGTCCTAGAGCTTGCACATGG 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1771 TTTATTAATTTCTCAGACACATGGGTCGCTGGGAAATTTAGTCCTAGAGCTTGCACATGG 1830
Query 1684 GCGTTCGGGATGAATCTAATTGATCTCGAAGAATGGAGAATACGGAAGTTGACTTCTACG 1743
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1831 GCTTTCGGGATGAATCTAATTGATCTCGAAGAATGGAGAATACGGAAGTTGACTTCTACA 1890
Query 1744 TACATAAAATACTTCAACCTGGGAACAAAGAGACCATTGTGGAAAGCTGGGAGCTTACCA 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1891 TACATAAAATACTTCAACCTGGGAACAAAGAGACCATTGTGGAAAGCTGGGAGCTTACCA 1950
Query 1804 ATAGGTTGGTTGACTTTCTATAGGCAAACATTAGCATTGGACAAGAGATGGCATGTGATG 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1951 ATAGGTTGGTTGACTTTCTATAGGCAAACATTAGCATTGGACAAGAGATGGCATGTGATG 2010
Query 1864 GGGCTAGGTCGCGAATCAGGAATCAAAGCGGTTGACATCGAACAAGCGGCGGTTATACAC 1923
||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2011 GGGTTAGGTCGCGAATCAGGAGTCAAAGCGGTTGACATCGAACAAGCGGCAGTTATACAC 2070
Query 1924 TACGATGGAGTTATGAAGCCGTGGTTGGACATTGGAAAAGAGAATTACAAACGTTACTGG 1983
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2071 TACGATGGGGTCATGAAGCCGTGGTTGGACATTGGAAAAGAGAATTACAAACGTTACTGG 2130
Query 1984 AACATACACGTCCCTTACCATCACACCTACTTGCAACAGTGCAATCTTCAAGCTTGATAC 2043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131 AACATACACGTCCCTTACCATCACACCTACTTGCAACAGTGCAATCTTCAAGCTTGATAC 2190
Query 2044 GGAAAAAAGCAAAT-----TCAGACAACTTAGGTTCAGTTT-AGATTATTTTTGTTAAAC 2097
| |||||| ||| || | ||||||||||||||||| ||||| ||||||||||||
Sbjct 2191 GAAAAAAAAAAAAAAAAAATCTGGCAACTTAGGTTCAGTTTCAGATTCTTTTTGTTAAAC 2250
Query 2098 AAGCTACTCAAGCATGGTATCAA 2120
|||||||||||||||| ||||||
Sbjct 2251 AAGCTACTCAAGCATGATATCAA 2273
Score = 468 bits (253), Expect = 1e-130
Identities = 344/384 (90%), Gaps = 21/384 (5%)
Strand=Plus/Plus
Query 1 ATGAAGAAGCTCTGAATCTAAAACTTGTCTCTTCCGACCCCAAACCCAGAAATTGAAGCG 60
||||||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||
Sbjct 114 ATGAAGAAGCTCTGAATCTAAAACTCCTCTC-TCCGACCCCAAATCCAGAAATTCAAGCG 172
Query 61 AAGAATAGAATCTCCCACTAGAGGAAAGCAATCCCAGAAACCCTAAGTTCTTCATCGTTT 120
| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 173 AGGAATAGAATCTCCCACTAGAGAAAAGCAATCCCAGAAACCCTAAGTTCTTCA-CGTTT 231
Query 121 CGTTCTTTTGCTTGTTGATCAAGCAGGAAATCTCCGAGATTTGTGAGTCTCTTGCTACTT 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 232 CGTTCTTTTGCTTGTTGATCAAGCAGGATATCTCCGAGATTTGTGAGTCTCTTGCTACTT 291
Query 181 CTTCCTGGAGAACGAG--A---T---A-G-GA-A----TAGTTC-TCGAGGAAGATAGAT 224
||||||||||||||| | | | | || | |||| | |||||||||||||||
Sbjct 292 CTTCCTGGAGAACGATTCAGGGTTTGATGTGATAAGAATAGT-CATCGAGGAAGATAGAT 350
Query 225 TCGGGAGAGAATTTTCGATT-GTATATTCATGAAACAAATTCGTCGATGGCAGAGGATTT 283
| ||| || |||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 351 TTGGG-GATTTTTTTTTATTTGTAGATTCATGAAACAAATTCGTCGATGGCAGAGGATTT 409
Query 284 TGATCCTCTCTCTGCTATCGATATCTGTCTTCGCTCCTCTTATTTTCGTCTCGAATCGGC 343
|||||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct 410 TGATCCTCGCTCTGCTATCGATATCTGTATTCGCTCCGCTTATTTTCGTATCGAATCGGC 469
Query 344 TTAAGAGCATCACTCCCGTTGGTC 367
||||||||||||||||||||||||
Sbjct 470 TTAAGAGCATCACTCCCGTTGGTC 493
> AT2G30575.1 | Symbols: GAUT5, LGT5 | los glycosyltransferase
5 | chr2:13020397-13024208 REVERSE LENGTH=2302
Length=2302
Score = 1166 bits (631), Expect = 0.0
Identities = 1243/1531 (81%), Gaps = 72/1531 (5%)
Strand=Plus/Plus
Query 544 AATAATCACAAAAAC-AGGGAAGAACAAGTGATAGTTTCACAGAAGATGACAGTTAGCTC 602
||||||||| ||| | | ||| |||||| | |||||||||||| | ||||| |||||
Sbjct 645 AATAATCAC-AAACCAAAGGAGGAACAA--G-CAGTTTCACAGAAAACCACAGTAAGCTC 700
Query 603 TG-ATGAAAAGGGT-CAAA-TTCTACCAACAG-TCAACCAACTTGCTAATAAAACGG-AT 657
| ||| | ||| ||| ||| | ||| || | | |||||| | ||||||||| ||
Sbjct 701 -GAATGCGGA-GGTGAAAATTTC-AGCAAGAGAT-ATTCAACTTAATCATAAAACGGAAT 756
Query 658 TTCAAGCCCCCTTTATCTAAGGGTGAAAAGAACACAAGGGTTCAGC-CCAATAGAGCAAC 716
| | | ||||||| | |||| |||||||||| ||||||||||| | || ||||||||
Sbjct 757 TCCGA-CCCCCTTCAAGTAAGAGTGAAAAGAATACAAGGGTTCAACTTGAA-AGAGCAAC 814
Query 717 AGATGTGAAAATAAAGGAGATCAGAGACAAAATTATTCAAGCTAAAGCCTACCTGAATTT 776
||||| || ||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 815 AGATGAGAGGGTAAAGGAGATCAGAGACAAAATTATCCAAGCGAAAGCCTATCTGAATTT 874
Query 777 CGCTCTACC-CGGAAGTAACTCTCAAATTGTGAGGGACTTGAGAGGTCGGACGAAAGAGC 835
|| ||||| |||| |||||| ||||| || | ||| ||||||| ||| ||||||||||
Sbjct 875 GGCCCTACCTGGGAA-TAACTCCCAAATCGTAAAGGAGTTGAGAGTTCGAACGAAAGAGC 933
Query 836 TGGAACGGTCTGTTGGGGATGCAACAAAGGATAAGGACTTATCAAAGGGCGCTCTTCGCA 895
|||||||| || ||| ||| | || |||||||| | || ||||| || ||| | ||
Sbjct 934 TGGAACGGGCTACTGGTGATACTACCAAGGATAAATATTTGCCAAAGAGCTCTCCTAACA 993
Query 896 GGGTGAAGCCCATGGAAAATGTGTTATACAAGGCT-AGTCGTGTCTTTAACAATTGCCCT 954
| ||||| |||||||| || ||||||||||| | || |||| |||| |||| ||||||
Sbjct 994 GATTGAAGGCCATGGAAGTTGCGTTATACAAGG-TCAGCCGTGCCTTTCACAACTGCCCT 1052
Query 955 GCCATTGCTACCAAACTCCGTGCCATGAATTATAACACAGAAGAACAAGTTCAGGCGCAG 1014
||||||||||||||||||| ||||||| |||||| || |||||||||| || |||||||
Sbjct 1053 GCCATTGCTACCAAACTCCAAGCCATGACTTATAAAACCGAAGAACAAGCTCGGGCGCAG 1112
Query 1015 AA-AAATCAAGCAGCATATCTAATGCAGCTTGCAGCAAGGACCACCCCAAAAGGGCTTCA 1073
|| ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 1113 AAGAAA-CAAGCAGCATATTTAATGCAGCTTGCAGCAAGGACTACCCCAAAAGGGCTTCA 1171
Query 1074 CTGTCTCTCAATGCGGCTGACATCAGAATACTTCT-CACTGGATC-CTGAAAAAAGGCAG 1131
||||||||||||||| ||||| ||||||| || | | ||||||| | ||||||||||
Sbjct 1172 TTGTCTCTCAATGCGGTTGACAACAGAATA-TTTTACCCTGGATCAC-GAAAAAAGGC-- 1227
Query 1132 ATGCCTAACCAGCAAAATTATTATGACCCTAATTTCAACCATTATGTTGTCTTCTCTGAC 1191
| || | || |||| |||| |||| ||| || || ||||||| || ||||||||||||
Sbjct 1228 A-GCTTTTGCAACAAAGTTATAATGATCCTGATCTCTACCATTACGTAGTCTTCTCTGAC 1286
Query 1192 AATGTTTTGGCTTCTTCAGTTGTTGTTAACTCTACGATATCTTCTTCAAAGGAGCCGGA- 1250
||||||||||| ||||| ||||||||||||||||| || || || |||||||| |||||
Sbjct 1287 AATGTTTTGGCCTCTTCGGTTGTTGTTAACTCTACAATCTCCTCATCAAAGGAACCGGAT 1346
Query 1251 AAGAATAGTCTTCCATGTCGTGACTGATTCACTTAATTACCCAGCAATCTCAATGTGGTT 1310
|| |||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1347 AA-AATAGTATTCCATGTGGTGACAGATTCACTCAATTACCCAGCAATCTCAATGTGGTT 1405
Query 1311 TCTGCTAAATATTCAAAGT---AGGGCTACCATCCAAATCCTCAACATTGATGATATGGA 1367
| | || || | | |||| || ||| | ||||||||||| ||||||||||| ||| |
Sbjct 1406 TTTACT-AA-A-CCCAAGTGGCAGAGCTTCAATCCAAATCCTAAACATTGATGAAATGAA 1462
Query 1368 TGTCCTACC--TCCAGCTTATGATCAATTGCTGATGAAGCAAAACTCTAA-TGACCCAAG 1424
|||||| || | | | ||| | ||||||||||||||||||| || || |||||||||
Sbjct 1463 TGTCCTGCCATTGTA-C-CATGCTGAATTGCTGATGAAGCAAAATTC-AAGTGACCCAAG 1519
Query 1425 ATTCATTTCTCCCCTCAATCACGCACGCTTCTATCTGCCGGATATATTCCCGGGTTTGAA 1484
| ||||||| | ||||| || |||||||||||||| || ||||| ||||| ||| | ||
Sbjct 1520 AATCATTTCAGCGCTCAACCATGCACGCTTCTATCTCCCAGATATCTTCCCAGGTCTAAA 1579
Query 1485 CAAGATCGTACTCTTTGACCATGATGTAGTAGTTCAAAGAGATTTAAGTAGACTGTGGAG 1544
||||||||||||||| || |||||||||||||| ||||| ||| ||| ||||||||||||
Sbjct 1580 CAAGATCGTACTCTTCGATCATGATGTAGTAGTGCAAAGGGATCTAACTAGACTGTGGAG 1639
Query 1545 TATTGATATGA-AAGGAAAGGTGGTTGGAGCTGTAGAGACTTGTCTTGAAGGTGAATC-T 1602
||||||||| ||||| || |||||||||||||||||||||||||||||||| || |
Sbjct 1640 CCTTGATATGACGGGGAAA-GTTGTTGGAGCTGTAGAGACTTGTCTTGAAGGTGA-TCCT 1697
Query 1603 TCATTTCGATCAATG-AGCACATTTATTAATTTCTCAGACACATGGGTCGCTGGGAAATT 1661
|||| ||| || ||| | | |||| |||||||||||||| ||||||| || ||||||
Sbjct 1698 TCATATCGTTCGATGGA-CTCATTCATTAATTTCTCAGATGCATGGGTTTCTCAGAAATT 1756
Query 1662 T-AGTCCTAGAG-CTTGCACATGGGCGTTCGGGATGAATCTAATTGATCTCGAAGAATGG 1719
| | ||| | || ||||||| ||||| ||||||||||||||| |||||||||||||||||
Sbjct 1757 TGA-TCCCA-AGGCTTGCACTTGGGCATTCGGGATGAATCTATTTGATCTCGAAGAATGG 1814
Query 1720 AGAATAC-GGAAGTTGACTTCTACGTACATAAAATACTTCAACCTGGGAACAAAGAG-AC 1777
|||| || ||| |||||||||| ||| | ||||||||| |||||||| ||| || ||
Sbjct 1815 AGAAGACAGGA-GTTGACTTCTGTATACCTGAAATACTTCGACCTGGGAGTAAA-AGGAC 1872
Query 1778 CAT-TGTGGAAAGCTGGGAGCTTACCAATAGGTTGGTTGACTTTCTATAGG-CAAACATT 1835
|| |||||||||| ||| | || ||| |||||||||||||||| | | || ||||| ||
Sbjct 1873 -ATCTGTGGAAAGCAGGGGGATTGCCAGTAGGTTGGTTGACTTTTT-TCGGGCAAACGTT 1930
Query 1836 AGCATTGGACAAGAGATGGCATGTGA-TGGGGCTAGGTCGCGAATCAGGAATCAAAGCG- 1893
| ||||| ||||||||| | ||| |||| |||||| |||||||||| ||| ||
Sbjct 1931 TCCGTTGGAAAAGAGATGGAACGTGGGTGGGT-TAGGTCACGAATCAGGACTCAGGGCAA 1989
Query 1894 GTTGACATCGAACAAGCGGCGGTTATACACTACGATGGAGTT-ATGAAGCCGTGGTTGGA 1952
| |||||||||||||| ||||||||||||||||| || | | ||||| || ||| ||||
Sbjct 1990 GC-GACATCGAACAAGCAGCGGTTATACACTACGACGG-GATCATGAAACCATGGCTGGA 2047
Query 1953 CATTGGAAAAGAGAATTACAAACGTTACTGGAACATACACGTCCCTTACCATCACACCT- 2011
||| || | ||| || ||||| || |||||||||||||| || |||||||||||| |||
Sbjct 2048 CATCGGTATAGACAAGTACAAGCGCTACTGGAACATACATGTACCTTACCATCAC-CCTC 2106
Query 2012 ACTTGCAACAGTGCAATC-TTCAAGCTTGAT 2041
|||| |||| |||||| | |||| | |||||
Sbjct 2107 ACTTACAACGGTGCAA-CATTCACGATTGAT 2136
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105119941230
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5