BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470709 Length=1592 Score E Sequences producing significant alignments: (Bits) Value AT1G06870.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family p... 2257 0.0 > AT1G06870.1 | Symbols: | Peptidase S24/S26A/S26B/S26C family protein | chr1:2108593-2110986 FORWARD LENGTH=1687 Length=1687 Score = 2257 bits (1222), Expect = 0.0 Identities = 1513/1642 (92%), Gaps = 65/1642 (4%) Strand=Plus/Plus Query 2 AGACTCTCTCTGCTATCGACC-AAACCTTCTCCTCTCCTCTGGGAGATCTCCAGCTTCTT 60 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| Sbjct 29 AGACTCTCTCTGCTTTCGACCAAAACCTTCTCCTCTCCTCTGGGAGATCTCCATCTTCTT 88 Query 61 CGCGCCTTCGCTT------C-----C----ACTCGATCTCGCCGGCGGCATAAGATCTCC 105 ||| |||||||| | | |||||||||||||||||| | ||| ||||| Sbjct 89 CGCTTCTTCGCTTCCCCGCCTGAAACAATTACTCGATCTCGCCGGCGGAACAAGCTCTCC 148 Query 106 GTTTATCTTTCCGGCAGATCGACTCTTCCAATTTCCGGTTAATTTCC--T-TAGGCCTT- 161 |||| ||||||||||||||||| |||||||| |||| || | |||| | |||| ||| Sbjct 149 GTTTCTCTTTCCGGCAGATCGATTCTTCCAA-TTCC--TT-A-TTCCTTTCTAGGTCTTC 203 Query 162 -AGAAAAAACCCTTACTTTCATCAAAATCTGCATTTCATGGCGATTAGGGTTACCTTCAC 220 || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 204 CTTAAGAAACCCTTACTTTCTTCAAAATCTGCATTT-ATGGCGATTAGGGTTACCTTCAC 262 Query 221 CTACTCCAGCTATGTTGCTAGGAGCATTGCTTCTTCCGCCGGGACTCGTGTCGGCACCGG 280 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 263 CTACTCCAGCTATGTTGCTAGGAGCATTGCTTCATCCGCCGGGACTCGTGTCGGTACCGG 322 Query 281 CGACGTTCGCTCATGCTTCGAATCATGGGTTCGTCCCAGATTCTGCGGCCACAATCAGAT 340 ||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 323 CGACGTTAGATCATGCTTCGAAACATGGGTTCGTCCCAGGTTCTGCGGCCACAATCAGAT 382 Query 341 ACCCGATATTGCTGATAAATCTCCCGGATCCAACACA-----T----GCTCAAGCCCTCG 391 ||| ||||||| ||||||||||||||||||||||||| | ||||| ||||||| Sbjct 383 ACCAGATATTGTTGATAAATCTCCCGGATCCAACACATGGGGTCCAAGCTCAGGCCCTCG 442 Query 392 TGCTCGACCAGCTTCATCGATGTATAGCACCATTGCGAGGGAACTCCTCGAAGAAGGAAG 451 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | Sbjct 443 TGCTCGACCAGCTTCATCAATGTATAGCACCATTGCGAGGGAAATCCTCGAAGAAGGCTG 502 Query 452 CAAGAGTCCACTTGTGTTGGGTATGATCTCTCTCATGAATTTGACAGGAGCTGCTCCACA 511 ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| Sbjct 503 CAAGAGTCCACTTGTCTTGGGTATGATCTCTCTCATGAATTTGACTGGA---GCTCCACA 559 Query 512 GCTCTCGGGTATGACCGGTCTCGGGATCTCTCCCTTTAAGACTTCTTCTGTTATCCCGTT 571 | | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 560 GTTTTCGGGTATGACCGGTCTCGGGATCTCTCCCTTTAAGACTTCTTCTGTCATCCCGTT 619 Query 572 CCTTAGGGGCTCCAAGTGGATGCCTTGTAGTATTCCGGCGACGTTATCAACGGATATTGC 631 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 620 CCTTAGGGGTTCCAAGTGGATGCCTTGTAGTATTCCGGCGACGTTATCAACGGATATTGC 679 Query 632 TGAGGTTGATAGAGGAGGAAAGGTGTGTGATGCTAAAGTGAAGTTGGAGTTGAGTGATAA 691 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 680 TGAGGTTGATAGAGGAGGAAAGGTCTGTGATCCTAAAGTGAAGTTGGAGTTGAGTGATAA 739 Query 692 AGTCTCTAATGCTGGTAACGGTTGGGTTAATAAGCTGTTGAATATCTGCTCGGAAGATGC 751 |||||| |||| ||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 740 AGTCTCGAATGGTGGAAACGGATGGGTTAATAAGCTGTTGAATATCTGCTCGGAGGATGC 799 Query 752 TAAGGCAGCTTTCACGGCGGTTACTGTTTCTCTCCTTTTCCGATCGGCGTTGGCTGAGCC 811 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 800 TAAGGCTGCTTTCACGGCGGTTACTGTTTCTCTCCTTTTCCGATCGGCTTTGGCCGAGCC 859 Query 812 AAAGTCTATACCTTCAACATCTATGCTTCCTACTCTCGATGTGGGTGATCGTGTTATGGC 871 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 860 AAAGTCTATACCTTCAACATCTATGCTTCCTACTCTCGATGTGGGTGATCGTGTTATAGC 919 Query 872 TGAGAAGGTCTCATACCTTTTCAGAAAGCCAGAGGTTTCAGACATAGTTATCTTCAAGGC 931 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 920 CGAGAAGGTCTCATACTTTTTCAGGAAGCCAGAGGTTTCAGACATAGTTATCTTCAAGGC 979 Query 932 TCCTCCTATTTTGGTGGAACATGGTTACAGTTGTACTGATGTTTTTATAAAAAGGATAGT 991 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 980 TCCTCCTATTTTGGTGGAACATGGTTACAGTTGTGCTGATGTTTTCATAAAAAGGATAGT 1039 Query 992 TGCTAGCGAAGGTGACTGGGTTGAAGTTTGTGATGGAAAGCTCTTAGTAAATGACACTGT 1051 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1040 TGCTAGCGAAGGTGACTGGGTTGAAGTTTGTGATGGAAAGCTCTTAGTAAATGACACTGT 1099 Query 1052 TCAAGCAGAGGATTTTGTCTTAGAGCCAATTGACTATGAAATGGAACCAATGTTTGTCCC 1111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100 TCAAGCAGAGGATTTTGTCTTAGAGCCAATTGACTATGAAATGGAACCAATGTTTGTCCC 1159 Query 1112 TGAAGGTTATGTCTTCGTCCTAGGAGACAACCGCAACAAAAGCTTTGATTCTCATAACTG 1171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1160 TGAAGGTTATGTCTTCGTCCTAGGAGACAACCGCAACAAAAGCTTTGATTCTCATAACTG 1219 Query 1172 GGGTCCACTTCCAATAAAGAACATCATAGGGAGATCTGTATTTCGCTATTGGCCACCAAG 1231 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1220 GGGTCCACTTCCAATAAAGAACATCATAGGGAGATCTGTGTTTCGCTATTGGCCACCAAG 1279 Query 1232 CAAAGTGTCAGACATCATACACCATGAACAAGTTATCCAAAAGAGAGCTGTTGATGTTTC 1291 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || Sbjct 1280 CAAAGTGTCAGACATAATACACCATGAACAAGTTAGCCAAAAGAGAGCTGTTGATGTATC 1339 Query 1292 TTGACCAAAGCAGATGGT-TCTTAGGATTAAGCAGAAAATTTGATTAGACGAGCTGTGCC 1350 |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 1340 TTGACCAACGCAGATGGTATCTTAGGATTAAGCAGAAAATTTGATTAGATGAGCTGTGCC 1399 Query 1351 ATGCCAACCATTTTGGCGCTGAAGGCAACAGAGCAATTTTTTCTTCCTGTCTAGGCTTCT 1410 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1400 ATGCCAACCATTTTGGCGCTGAAGGCAACAGAGCAATTCTTTCTTCCTGTCTAGGCTTG- 1458 Query 1411 ATGGCGGACATGGAATGCAATGGGAAATCCATa-aaaaa-a---------TT--T-TT-- 1454 ||||||||||||||||||| ||||||||||||| ||||| | || | || Sbjct 1459 ATGGCGGACATGGAATGCACTGGGAAATCCATATAAAAAGAACAAGAAAATTGATATTTT 1518 Query 1455 -GCTTTTGATTCTTT--GATGTGTTGAAACCTAAATGCAACCAGTGTAATTGGCAGTCGC 1511 ||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct 1519 TGCTTT-GATTTTTTTTGATGTGTTGAAACCTAAATGCATCCAGTGTAATTGGCAGTAGC 1577 Query 1512 TGTCAAACATAAAAGGGTGAACTATCTTTTT-GAGTATTATCTAATGTGAAAAATCCTGT 1570 |||||||||||||||||| |||| ||||||| ||||||| | |||||||| |||||||| Sbjct 1578 TGTCAAACATAAAAGGGTAAACTTTCTTTTTTGAGTATT-T--AATGTGAAGAATCCTGT 1634 Query 1571 AAACGTTCTGTTCTCAAGCTCT 1592 |||||||||||||||||||||| Sbjct 1635 AAACGTTCTGTTCTCAAGCTCT 1656 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78614053470 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5