BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470724
Length=1534
Score E
Sequences producing significant alignments: (Bits) Value
AT1G07010.3 | Symbols: | Calcineurin-like metallo-phosphoester... 2139 0.0
> AT1G07010.3 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr1:2152880-2155238 FORWARD LENGTH=1542
Length=1542
Score = 2139 bits (1158), Expect = 0.0
Identities = 1431/1553 (92%), Gaps = 57/1553 (4%)
Strand=Plus/Plus
Query 1 ACAAATGTTAAGTGATTTCATCAAAGCTCTGGTGGATCATTGCTTCTCCACCACCAACAC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 8 ACAAATGTTAAGTGATTTCATCAAAGCTCTGGTGGATCATTGCTTCTCCACCACCAATA- 66
Query 61 CAATCAATGGCTTCTCTATACCTCAATTCCTTActtccacttcctccttctcatccccag 120
| |||||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 67 C---CAATGGCTTCCCTTTACCTCAATTCCTTACTTCCACTTCCTCCTTCTCACCCCCAG 123
Query 121 aaacttatagaaccttcttcttcttctccttcctcttTGTTGAGCACTTCCAATGGTAAC 180
|||||| ||||| | |||| | | |||||||||||||||||||||| |||||||||
Sbjct 124 AAACTTTTAGAA----C--CTTC-T-T-CTTCCTCTTTGTTGAGCACTTCTAATGGTAAC 174
Query 181 GAAGTTGCTCTGAAGCCGATTGTCATCAATGGAGACCCACCCACTTTCGTCTCTGCTCCT 240
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 175 GAACTTGCTCTGAAGCCGATTGTCATCAATGGAGATCCACCCACTTTCGTCTCTGCTCCT 234
Query 241 GCTCGTCGTATCGTTGCAG-TT--GGA---G-A----C-CTT-CA-T-GGCGA--T-C-T 281
||||||||||||||||||| || || | | | || || | || || | | |
Sbjct 235 GCTCGTCGTATCGTTGCAGGTTTTGGTTTTGGATATGCACTCACAGTTGGAGACCTTCAT 294
Query 282 GG-G-T------AAAGCCAGAGACGCACTTCAGATGGCCGGCGTCTTGAGCTCTGACGGA 333
|| | | ||||||||||||||||||||| |||| |||||||||||||| ||||||
Sbjct 295 GGCGATCTGGGTAAAGCCAGAGACGCACTTCAGTTGGCTGGCGTCTTGAGCTCCGACGGA 354
Query 334 CGAGACCAGTGG-AT-TGGCCA-AGA-CT-C-TGTACT-AG-TTCAGGTAGGAGATATAC 385
|||||||||||| || || | | || | | | ||| | || |||||||||||||||
Sbjct 355 CGAGACCAGTGGTATCTG-CTAGAGTTCAACAT-TACGCATCTTGAGGTAGGAGATATAC 412
Query 386 TTGATCGCGGTGATGATGAAATTGCAATACTCTCTTTATTGAGGTCACTTGATGGTCAGG 445
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||
Sbjct 413 TTGATCGCGGTGATGATGAAATCGCAATACTCTCCTTATTGAGGTCACTTGATGATCAGG 472
Query 446 CCAAGGCTAATGGTGGAGCTGTTTTCCAGGTTAATGGGAACCACGAGACGATGAATGTGG 505
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 473 CCAAGGCTAATGGTGGAGCTGTTTTCCAGGTTAATGGGAACCACGAGACAATGAATGTTG 532
Query 506 AAGGGGATTTCAGATATGTAGATGCGAGAGCATTTGATGAGTGTACTGATTTTCTTGACT 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 AAGGGGATTTCAGATATGTAGATGCGAGAGCATTTGATGAGTGTACTGATTTTCTTGACT 592
Query 566 ACTTGGAGGACTATGCACAAGACTGGGACAAAGCGTTTACTAATTGGATTTTTGAGTCAA 625
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 593 ACTTGGAGGACTATGCACAAGACTGGGACAAAGCGTTTAGGAATTGGATTTTTGAGTCAA 652
Query 626 GACAATGGAAAGAAGATAGAAGGAATTCTCAAACCTATTGGGATCAATGGAATGTAGTAA 685
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 653 GACAATGGAAAGAAGATAGGAGGAGTTCTCAAACCTATTGGGATCAATGGAATGTAGTAA 712
Query 686 AGAGGCAAAAGGGAGTGATTGCAAGGTCGATCCTTTTCAGACCAGGTGGTCGATTAGCAT 745
|||||||||||||||| |||||||||||| ||||| |||||||||||||||| |||||||
Sbjct 713 AGAGGCAAAAGGGAGTAATTGCAAGGTCGGTCCTTCTCAGACCAGGTGGTCGTTTAGCAT 772
Query 746 GTGAATTGGCGCGTCACGGAGTTATTCTGCGTGTTAATAACTGGATTTTCTGCCACGGTG 805
|||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct 773 GTGAATTGTCGCGTCACGGAGTTATTCTCCGTGTTAATAACTGGCTCTTCTGCCACGGTG 832
Query 806 GTCTCCTTCCTCACCATGTTGCATACGGGGTAGAGAGGATAAACAGAGAAGTCTCTACTT 865
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 833 GTCTCCTTCCTCACCATGTTGCATACGGCATAGAGAGGATAAACAGAGAAGTCTCTACTT 892
Query 866 GGATGAGAAGCCCTACTAACTATGAAGACAGTCCTCAGATGCCGTTCATTGCGACTCGAG 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 GGATGAGAAGCCCTACTAACTATGAAGACAGTCCTCAGATGCCGTTCATTGCGACTCGAG 952
Query 926 GATATGACAGTGTAGTCTGGAGCCGCCTTTACTCAAGAGAGACTTCTGAGCTGGAGGACT 985
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 953 GATATGACAGTGTAGTCTGGAGCCGACTTTACTCAAGAGAGACTTCTGAGCTTGAGGACT 1012
Query 986 ATCAAATTGAACAGGTAAATAAAATTCTTCACGACACTCTTGAAGCTGTCGGTGCCAAGG 1045
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1013 ATCAAATTGAACAGGTAAATAAAATTCTTCACGACACTCTTGAAGCTGTAGGTGCCAAAG 1072
Query 1046 CGATGGTGGTCGGGCATACTCCCCAGTTATCAGGGGTTAACTGTGAGTATGGTTGCGGCA 1105
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1073 CGATGGTGGTCGGGCATACTCCCCAGTTATCAGGGGTTAACTGTGAATATGGTTGCGGCA 1132
Query 1106 TATGGAGAGTTGATGTAGGAATGTCCAGTGGTGTTCTTGACTCTAGACCAGAGGTTCTGG 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 TATGGAGAGTTGATGTAGGAATGTCCAGTGGTGTTCTTGACTCTAGACCAGAGGTTCTGG 1192
Query 1166 AGATAAGAGGGGACAAAGCTAGAGTTATAAGGAGCAACCGTGACAGACTTCATGAACTTC 1225
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1193 AGATAAGAGGGGACAAAGCTAGAGTAATAAGGAGCAACCGTGACAGACTTCATGAACTTC 1252
Query 1226 AAGTTGCAGATTACATCTGaaaaaaaGAACCAGACTCTCATGTTCAAGATCCAAACTTTA 1285
| |||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1253 AGGTTGCAGATTACATTTAAAAAAAAGAACCAGACTCTCATGTTCAAGATTCAAACTTTA 1312
Query 1286 TCGCCATATTTCTCACCATGA-ACAAAATAAAGCATCAGAAGGTTTCAGTCTTTCAGACA 1344
|| || ||||| ||| ||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct 1313 TCACCGTATTTGTCATCAT-ACACATAATAAAGCATCAGAAGGTTTCAGTCTTTCAGACA 1371
Query 1345 AGATCCAGATGTAGTTGAATGAGGGCATACTTTGAACTCTATGTATGTACGTATCTATGT 1404
|| |||||||| |||||| |||| |||||||||||||||||||| |||||||||||
Sbjct 1372 AGGTCCAGATGCAGTTGAGCGAGGCCATACTTTGAACTCTATGTA----CGTATCTATGT 1427
Query 1405 ATATATGTATGTGAATCATCAGAAACAACATACTAAATTCATCAAGTAAAGGCCTTGTAT 1464
|||||||| |||||||||||||| ||||||||||| | |||||||||||||| ||||||
Sbjct 1428 ATATATGTGTGTGAATCATCAGATACAACATACTATACTCATCAAGTAAAGGTTTTGTAT 1487
Query 1465 AGCAAAA-CACTGGTTAGTGTTACTTAAAGAGTGGTGAAATTCTCTGGTTTTT 1516
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1488 AGCAAAAACACTGGTTAGTGTTACTTAAAGAGTGGTGAAATTCTCTGGTTTTT 1540
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75702421860
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5